Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 AL596211.1-201ENST00000569873 2277 ntBASIC2.1□□□□□ -2.07
HERVK_113P62684 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
HERVK_113P62684 RNU6-661P-201ENST00000362409 107 ntBASIC2.1□□□□□ -2.07
HERVK_113P62684 RNU6-1056P-201ENST00000383996 107 ntBASIC2.1□□□□□ -2.07
HERVK_113P62684 SNORD20-201ENST00000384550 80 ntBASIC2.1□□□□□ -2.07
HERVK_113P62684 RNU6-360P-201ENST00000390944 104 ntBASIC2.1□□□□□ -2.07
HERVK_113P62684 U8.17-201ENST00000391292 132 ntBASIC2.1□□□□□ -2.07
HERVK_113P62684 MIR1263-201ENST00000408324 86 ntBASIC2.1□□□□□ -2.07
HERVK_113P62684 BTF3P4-201ENST00000418852 495 ntBASIC2.1□□□□□ -2.07
HERVK_113P62684 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.1□□□□□ -2.07
HERVK_113P62684 RNU6-240P-201ENST00000516098 97 ntBASIC2.1□□□□□ -2.07
HERVK_113P62684 RNU6-830P-201ENST00000516353 107 ntBASIC2.1□□□□□ -2.07
HERVK_113P62684 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
HERVK_113P62684 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.09□□□□□ -2.07
HERVK_113P62684 MIR424-201ENST00000362227 98 ntBASIC2.09□□□□□ -2.07
HERVK_113P62684 SNORA27-201ENST00000384323 126 ntBASIC2.09□□□□□ -2.07
HERVK_113P62684 RNU7-80P-201ENST00000459562 61 ntBASIC2.09□□□□□ -2.07
HERVK_113P62684 RN7SL274P-201ENST00000492268 272 ntBASIC2.09□□□□□ -2.07
HERVK_113P62684 RNU6-113P-201ENST00000516653 101 ntBASIC2.09□□□□□ -2.07
HERVK_113P62684 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.09□□□□□ -2.07
HERVK_113P62684 MIR4781-201ENST00000585250 76 ntBASIC2.09□□□□□ -2.07
HERVK_113P62684 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.09□□□□□ -2.07
HERVK_113P62684 MIR7111-201ENST00000619751 72 ntBASIC2.09□□□□□ -2.07
HERVK_113P62684 AC106754.2-201ENST00000623006 233 ntBASIC2.09□□□□□ -2.07
HERVK_113P62684 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.09□□□□□ -2.08
HERVK_113P62684 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.08□□□□□ -2.08
HERVK_113P62684 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
HERVK_113P62684 AL391516.1-201ENST00000554380 2449 ntBASIC2.08□□□□□ -2.08
HERVK_113P62684 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
HERVK_113P62684 RNU6-690P-201ENST00000365242 106 ntBASIC2.08□□□□□ -2.08
HERVK_113P62684 Y_RNA.366-201ENST00000365540 102 ntBASIC2.08□□□□□ -2.08
HERVK_113P62684 RNU6-203P-201ENST00000384038 104 ntBASIC2.08□□□□□ -2.08
HERVK_113P62684 Y_RNA.563-201ENST00000384707 108 ntBASIC2.08□□□□□ -2.08
HERVK_113P62684 MIR526A1-201ENST00000384897 85 ntBASIC2.08□□□□□ -2.08
HERVK_113P62684 RNU6-1064P-201ENST00000410626 104 ntBASIC2.08□□□□□ -2.08
HERVK_113P62684 Y_RNA.617-201ENST00000410920 90 ntBASIC2.08□□□□□ -2.08
HERVK_113P62684 AC107297.1-201ENST00000459991 176 ntBASIC2.08□□□□□ -2.08
HERVK_113P62684 SUMO2P16-201ENST00000519475 264 ntBASIC2.08□□□□□ -2.08
HERVK_113P62684 AC090821.2-201ENST00000523552 176 ntBASIC2.08□□□□□ -2.08
HERVK_113P62684 FAM106DP-201ENST00000586416 501 ntBASIC2.08□□□□□ -2.08
HERVK_113P62684 U6.95-201ENST00000636931 70 ntBASIC2.08□□□□□ -2.08
HERVK_113P62684 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
HERVK_113P62684 Y_RNA.226-201ENST00000364337 114 ntBASIC2.07□□□□□ -2.08
HERVK_113P62684 RNU6-1325P-201ENST00000364905 105 ntBASIC2.07□□□□□ -2.08
HERVK_113P62684 Y_RNA.494-201ENST00000384432 111 ntBASIC2.07□□□□□ -2.08
HERVK_113P62684 RNU4-62P-201ENST00000410125 130 ntBASIC2.07□□□□□ -2.08
HERVK_113P62684 RPL23AP6-201ENST00000446637 472 ntBASIC2.07□□□□□ -2.08
HERVK_113P62684 RNA5SP233-201ENST00000459153 113 ntBASIC2.07□□□□□ -2.08
HERVK_113P62684 RPS26P48-201ENST00000491713 339 ntBASIC2.07□□□□□ -2.08
HERVK_113P62684 SNORD33.1-201ENST00000516213 88 ntBASIC2.07□□□□□ -2.08
HERVK_113P62684 IGKV1-22-201ENST00000524313 326 ntBASIC2.07□□□□□ -2.08
HERVK_113P62684 MIR4299-201ENST00000577899 72 ntBASIC2.07□□□□□ -2.08
HERVK_113P62684 MIR4255-201ENST00000579351 72 ntBASIC2.07□□□□□ -2.08
HERVK_113P62684 AC025166.1-201ENST00000612411 163 ntBASIC2.07□□□□□ -2.08
HERVK_113P62684 AL773524.1-201ENST00000614065 229 ntBASIC2.07□□□□□ -2.08
HERVK_113P62684 AL137067.1-201ENST00000615933 120 ntBASIC2.07□□□□□ -2.08
HERVK_113P62684 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.06□□□□□ -2.08
HERVK_113P62684 MIR302B-201ENST00000362188 73 ntBASIC2.06□□□□□ -2.08
HERVK_113P62684 SNORA1.2-201ENST00000365189 134 ntBASIC2.06□□□□□ -2.08
HERVK_113P62684 RNU6-439P-201ENST00000384188 106 ntBASIC2.06□□□□□ -2.08
HERVK_113P62684 Y_RNA.454-201ENST00000384224 113 ntBASIC2.06□□□□□ -2.08
HERVK_113P62684 RNU6-476P-201ENST00000384726 107 ntBASIC2.06□□□□□ -2.08
HERVK_113P62684 RNA5SP212-201ENST00000391223 107 ntBASIC2.06□□□□□ -2.08
HERVK_113P62684 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC2.06□□□□□ -2.08
HERVK_113P62684 MTATP6P29-201ENST00000415057 132 ntBASIC2.06□□□□□ -2.08
HERVK_113P62684 HMGN2P19-201ENST00000425149 265 ntBASIC2.06□□□□□ -2.08
HERVK_113P62684 AL121890.5-201ENST00000620848 304 ntBASIC2.06□□□□□ -2.08
HERVK_113P62684 AC091932.4-201ENST00000623386 200 ntBASIC2.06□□□□□ -2.08
HERVK_113P62684 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
HERVK_113P62684 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.05□□□□□ -2.08
HERVK_113P62684 RNU6-834P-201ENST00000362367 110 ntBASIC2.05□□□□□ -2.08
HERVK_113P62684 SNORD115-34-201ENST00000362441 82 ntBASIC2.05□□□□□ -2.08
HERVK_113P62684 SNORD115-12-201ENST00000362583 82 ntBASIC2.05□□□□□ -2.08
HERVK_113P62684 SNORD115-29-201ENST00000362834 82 ntBASIC2.05□□□□□ -2.08
HERVK_113P62684 SNORD115-9-201ENST00000362912 82 ntBASIC2.05□□□□□ -2.08
HERVK_113P62684 SNORD115-21-201ENST00000362963 81 ntBASIC2.05□□□□□ -2.08
HERVK_113P62684 SNORD115-14-201ENST00000363090 81 ntBASIC2.05□□□□□ -2.08
HERVK_113P62684 SNORD115-13-201ENST00000363358 82 ntBASIC2.05□□□□□ -2.08
HERVK_113P62684 SNORD115-41-201ENST00000363608 82 ntBASIC2.05□□□□□ -2.08
HERVK_113P62684 SNORD115-11-201ENST00000363616 82 ntBASIC2.05□□□□□ -2.08
HERVK_113P62684 SNORD115-5-201ENST00000363633 82 ntBASIC2.05□□□□□ -2.08
HERVK_113P62684 SNORD115-39-201ENST00000363694 82 ntBASIC2.05□□□□□ -2.08
HERVK_113P62684 RNU6-414P-201ENST00000363705 104 ntBASIC2.05□□□□□ -2.08
HERVK_113P62684 SNORD115-4-201ENST00000363810 82 ntBASIC2.05□□□□□ -2.08
HERVK_113P62684 SNORD115-16-201ENST00000363887 82 ntBASIC2.05□□□□□ -2.08
HERVK_113P62684 SNORD115-6-201ENST00000363942 82 ntBASIC2.05□□□□□ -2.08
HERVK_113P62684 SNORD115-42-201ENST00000364273 82 ntBASIC2.05□□□□□ -2.08
HERVK_113P62684 SNORD115-15-201ENST00000364809 81 ntBASIC2.05□□□□□ -2.08
HERVK_113P62684 SNORD115-1-201ENST00000364961 82 ntBASIC2.05□□□□□ -2.08
HERVK_113P62684 SNORD115-26-201ENST00000365067 82 ntBASIC2.05□□□□□ -2.08
HERVK_113P62684 SNORD115-10-201ENST00000365073 81 ntBASIC2.05□□□□□ -2.08
HERVK_113P62684 SNORD115-43-201ENST00000365503 82 ntBASIC2.05□□□□□ -2.08
HERVK_113P62684 Y_RNA.370-201ENST00000365589 108 ntBASIC2.05□□□□□ -2.08
HERVK_113P62684 SNORD115-36-201ENST00000365629 82 ntBASIC2.05□□□□□ -2.08
HERVK_113P62684 AC244636.1-201ENST00000421152 228 ntBASIC2.05□□□□□ -2.08
HERVK_113P62684 MIR4303-201ENST00000581299 66 ntBASIC2.05□□□□□ -2.08
HERVK_113P62684 SNORD115-40-201ENST00000606510 82 ntBASIC2.05□□□□□ -2.08
HERVK_113P62684 AL627230.6-201ENST00000611129 280 ntBASIC2.05□□□□□ -2.08
HERVK_113P62684 MIR6129-201ENST00000616087 109 ntBASIC2.05□□□□□ -2.08
HERVK_113P62684 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 173 ms