Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 AC004941.2-201ENST00000427009 228 ntBASIC2.36□□□□□ -2.03
EPHB3P54753 RNU6-1116P-201ENST00000517269 99 ntBASIC2.36□□□□□ -2.03
EPHB3P54753 IGLV3-17-201ENST00000519099 244 ntBASIC2.36□□□□□ -2.03
EPHB3P54753 Y_RNA.773-201ENST00000607168 90 ntBASIC2.36□□□□□ -2.03
EPHB3P54753 AC245884.12-201ENST00000615364 59 ntBASIC2.36□□□□□ -2.03
EPHB3P54753 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.36□□□□□ -2.03
EPHB3P54753 MIR6132-201ENST00000622083 109 ntBASIC2.36□□□□□ -2.03
EPHB3P54753 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.36□□□□□ -2.03
EPHB3P54753 MIR203B-201ENST00000636080 86 ntBASIC2.36□□□□□ -2.03
EPHB3P54753 MIR1255B1-201ENST00000636325 63 ntBASIC2.36□□□□□ -2.03
EPHB3P54753 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.36□□□□□ -2.03
EPHB3P54753 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
EPHB3P54753 AC007336.1-201ENST00000576365 3828 ntBASIC2.35□□□□□ -2.03
EPHB3P54753 RNU6-832P-201ENST00000363319 107 ntBASIC2.35□□□□□ -2.03
EPHB3P54753 Y_RNA.299-201ENST00000364973 94 ntBASIC2.35□□□□□ -2.03
EPHB3P54753 Y_RNA.494-201ENST00000384432 111 ntBASIC2.35□□□□□ -2.03
EPHB3P54753 SNORD78.1-201ENST00000390866 65 ntBASIC2.35□□□□□ -2.03
EPHB3P54753 RNU6-733P-201ENST00000410759 104 ntBASIC2.35□□□□□ -2.03
EPHB3P54753 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.35□□□□□ -2.03
EPHB3P54753 AC015922.2-201ENST00000435593 184 ntBASIC2.35□□□□□ -2.03
EPHB3P54753 SNORA31.10-201ENST00000516482 106 ntBASIC2.35□□□□□ -2.03
EPHB3P54753 AC005786.1-201ENST00000588553 154 ntBASIC2.35□□□□□ -2.03
EPHB3P54753 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.35□□□□□ -2.03
EPHB3P54753 AC092881.1-201ENST00000638218 2733 ntBASIC2.35□□□□□ -2.03
EPHB3P54753 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
EPHB3P54753 Y_RNA.17-201ENST00000362433 111 ntBASIC2.34□□□□□ -2.03
EPHB3P54753 RNU4-67P-201ENST00000364569 141 ntBASIC2.34□□□□□ -2.03
EPHB3P54753 SNORA67.1-201ENST00000364749 141 ntBASIC2.34□□□□□ -2.03
EPHB3P54753 SNORA4.2-201ENST00000365313 147 ntBASIC2.34□□□□□ -2.03
EPHB3P54753 RNU6-409P-201ENST00000384114 104 ntBASIC2.34□□□□□ -2.03
EPHB3P54753 RNU6-424P-201ENST00000384367 105 ntBASIC2.34□□□□□ -2.03
EPHB3P54753 AL353813.1-201ENST00000440700 253 ntBASIC2.34□□□□□ -2.03
EPHB3P54753 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.34□□□□□ -2.03
EPHB3P54753 RNU7-61P-201ENST00000515897 61 ntBASIC2.34□□□□□ -2.03
EPHB3P54753 AC069114.2-201ENST00000604699 304 ntBASIC2.34□□□□□ -2.03
EPHB3P54753 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.34□□□□□ -2.03
EPHB3P54753 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.34□□□□□ -2.03
EPHB3P54753 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
EPHB3P54753 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.33□□□□□ -2.04
EPHB3P54753 MIR6073-201ENST00000352083 89 ntBASIC2.33□□□□□ -2.04
EPHB3P54753 RNU6-170P-201ENST00000362832 104 ntBASIC2.33□□□□□ -2.04
EPHB3P54753 SNORD115-2-201ENST00000362842 82 ntBASIC2.33□□□□□ -2.04
EPHB3P54753 RNU6-833P-201ENST00000363486 107 ntBASIC2.33□□□□□ -2.04
EPHB3P54753 Y_RNA.155-201ENST00000363632 101 ntBASIC2.33□□□□□ -2.04
EPHB3P54753 SNORA3A-201ENST00000364113 130 ntBASIC2.33□□□□□ -2.04
EPHB3P54753 RNU6-1019P-201ENST00000364424 107 ntBASIC2.33□□□□□ -2.04
EPHB3P54753 SNORD115-20-201ENST00000365099 82 ntBASIC2.33□□□□□ -2.04
EPHB3P54753 RNU1-51P-201ENST00000365345 176 ntBASIC2.33□□□□□ -2.04
EPHB3P54753 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
EPHB3P54753 RNU4-69P-201ENST00000410677 143 ntBASIC2.33□□□□□ -2.04
EPHB3P54753 RNA5SP200-201ENST00000516360 103 ntBASIC2.33□□□□□ -2.04
EPHB3P54753 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.33□□□□□ -2.04
EPHB3P54753 AC012531.4-201ENST00000616509 177 ntBASIC2.33□□□□□ -2.04
EPHB3P54753 AP006437.1-201ENST00000641440 3685 ntBASIC2.32□□□□□ -2.04
EPHB3P54753 SNORD114-1-201ENST00000362705 72 ntBASIC2.32□□□□□ -2.04
EPHB3P54753 Y_RNA.377-201ENST00000365644 108 ntBASIC2.32□□□□□ -2.04
EPHB3P54753 SNORA64-201ENST00000384674 134 ntBASIC2.32□□□□□ -2.04
EPHB3P54753 MIR524-201ENST00000385242 87 ntBASIC2.32□□□□□ -2.04
EPHB3P54753 MIR1267-201ENST00000408723 78 ntBASIC2.32□□□□□ -2.04
EPHB3P54753 AC109327.2-201ENST00000448339 378 ntBASIC2.32□□□□□ -2.04
EPHB3P54753 RNU2-11P-201ENST00000459191 187 ntBASIC2.32□□□□□ -2.04
EPHB3P54753 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.32□□□□□ -2.04
EPHB3P54753 SNORA31.11-201ENST00000516528 139 ntBASIC2.32□□□□□ -2.04
EPHB3P54753 RNA5SP137-201ENST00000516833 135 ntBASIC2.32□□□□□ -2.04
EPHB3P54753 MIR3126-201ENST00000577443 74 ntBASIC2.32□□□□□ -2.04
EPHB3P54753 AC026271.5-201ENST00000577873 130 ntBASIC2.32□□□□□ -2.04
EPHB3P54753 MIR219B-201ENST00000637023 88 ntBASIC2.32□□□□□ -2.04
EPHB3P54753 MIR6841-201ENST00000637129 72 ntBASIC2.32□□□□□ -2.04
EPHB3P54753 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.32□□□□□ -2.04
EPHB3P54753 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.32□□□□□ -2.04
EPHB3P54753 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
EPHB3P54753 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
EPHB3P54753 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
EPHB3P54753 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
EPHB3P54753 RNU1-58P-201ENST00000362413 163 ntBASIC2.31□□□□□ -2.04
EPHB3P54753 MIR605-201ENST00000385078 83 ntBASIC2.31□□□□□ -2.04
EPHB3P54753 MIR29C-201ENST00000385231 88 ntBASIC2.31□□□□□ -2.04
EPHB3P54753 RNU6-1319P-201ENST00000390855 104 ntBASIC2.31□□□□□ -2.04
EPHB3P54753 RNU6-747P-201ENST00000390928 104 ntBASIC2.31□□□□□ -2.04
EPHB3P54753 RNU6-241P-201ENST00000391148 104 ntBASIC2.31□□□□□ -2.04
EPHB3P54753 RNU6-644P-201ENST00000391155 98 ntBASIC2.31□□□□□ -2.04
EPHB3P54753 RNU6-177P-201ENST00000411257 104 ntBASIC2.31□□□□□ -2.04
EPHB3P54753 HSPE1P9-201ENST00000440046 311 ntBASIC2.31□□□□□ -2.04
EPHB3P54753 AC069257.2-201ENST00000441819 155 ntBASIC2.31□□□□□ -2.04
EPHB3P54753 RNU6-795P-201ENST00000516323 103 ntBASIC2.31□□□□□ -2.04
EPHB3P54753 RNA5SP82-201ENST00000516707 92 ntBASIC2.31□□□□□ -2.04
EPHB3P54753 RNU7-181P-201ENST00000517234 74 ntBASIC2.31□□□□□ -2.04
EPHB3P54753 AL513534.2-201ENST00000603836 250 ntBASIC2.31□□□□□ -2.04
EPHB3P54753 AC025521.1-201ENST00000621624 286 ntBASIC2.31□□□□□ -2.04
EPHB3P54753 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.31□□□□□ -2.04
EPHB3P54753 ICE2P2-201ENST00000483823 2787 ntBASIC2.31□□□□□ -2.04
EPHB3P54753 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.3□□□□□ -2.04
EPHB3P54753 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.3□□□□□ -2.04
EPHB3P54753 Y_RNA.96-201ENST00000363092 109 ntBASIC2.3□□□□□ -2.04
EPHB3P54753 RNU6-679P-201ENST00000391003 106 ntBASIC2.3□□□□□ -2.04
EPHB3P54753 U8.16-201ENST00000391279 133 ntBASIC2.3□□□□□ -2.04
EPHB3P54753 AL451046.2-201ENST00000403074 277 ntBASIC2.3□□□□□ -2.04
EPHB3P54753 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.3□□□□□ -2.04
EPHB3P54753 RNU7-113P-201ENST00000459273 62 ntBASIC2.3□□□□□ -2.04
EPHB3P54753 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 193.8 ms