Protein–RNA interactions for Protein: P48066

SLC6A11, Sodium- and chloride-dependent GABA transporter 3, humanhuman

Predictions only

Length 632 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A11P48066 MIR526A1-201ENST00000384897 85 ntBASIC2.16□□□□□ -2.06
SLC6A11P48066 RNU7-67P-201ENST00000459003 62 ntBASIC2.16□□□□□ -2.06
SLC6A11P48066 RNU2-35P-201ENST00000516446 142 ntBASIC2.16□□□□□ -2.06
SLC6A11P48066 MIR4679-2-201ENST00000578358 77 ntBASIC2.16□□□□□ -2.06
SLC6A11P48066 AL353997.5-201ENST00000618886 171 ntBASIC2.16□□□□□ -2.06
SLC6A11P48066 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
SLC6A11P48066 Y_RNA.85-201ENST00000363014 111 ntBASIC2.15□□□□□ -2.07
SLC6A11P48066 RNY4P6-201ENST00000363667 96 ntBASIC2.15□□□□□ -2.07
SLC6A11P48066 SNORA70.7-201ENST00000384159 133 ntBASIC2.15□□□□□ -2.07
SLC6A11P48066 RNA5SP247-201ENST00000411181 105 ntBASIC2.15□□□□□ -2.07
SLC6A11P48066 RNU7-45P-201ENST00000459460 63 ntBASIC2.15□□□□□ -2.07
SLC6A11P48066 RNU6-958P-201ENST00000516995 106 ntBASIC2.15□□□□□ -2.07
SLC6A11P48066 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.15□□□□□ -2.07
SLC6A11P48066 FAM106DP-201ENST00000586416 501 ntBASIC2.15□□□□□ -2.07
SLC6A11P48066 Y_RNA.783-201ENST00000613546 102 ntBASIC2.15□□□□□ -2.07
SLC6A11P48066 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.15□□□□□ -2.07
SLC6A11P48066 AL589743.1-201ENST00000551932 2712 ntBASIC2.15□□□□□ -2.07
SLC6A11P48066 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
SLC6A11P48066 AC005336.3-201ENST00000623833 2679 ntBASIC2.14□□□□□ -2.07
SLC6A11P48066 MIR424-201ENST00000362227 98 ntBASIC2.14□□□□□ -2.07
SLC6A11P48066 RNU6-1104P-201ENST00000384723 104 ntBASIC2.14□□□□□ -2.07
SLC6A11P48066 MT-TI-201ENST00000387365 69 ntBASIC2.14□□□□□ -2.07
SLC6A11P48066 SNORD28B-201ENST00000390993 75 ntBASIC2.14□□□□□ -2.07
SLC6A11P48066 SNORD123-201ENST00000459473 70 ntBASIC2.14□□□□□ -2.07
SLC6A11P48066 RPL23AP42-201ENST00000471152 471 ntBASIC2.14□□□□□ -2.07
SLC6A11P48066 MIR3683-201ENST00000580847 82 ntBASIC2.14□□□□□ -2.07
SLC6A11P48066 AC106754.2-201ENST00000623006 233 ntBASIC2.14□□□□□ -2.07
SLC6A11P48066 AC021613.1-201ENST00000623880 111 ntBASIC2.14□□□□□ -2.07
SLC6A11P48066 AL442644.1-201ENST00000454390 3105 ntBASIC2.14□□□□□ -2.07
SLC6A11P48066 RNA5SP276-201ENST00000362580 94 ntBASIC2.13□□□□□ -2.07
SLC6A11P48066 RNU6-457P-201ENST00000363999 107 ntBASIC2.13□□□□□ -2.07
SLC6A11P48066 Y_RNA.362-201ENST00000365518 110 ntBASIC2.13□□□□□ -2.07
SLC6A11P48066 SNORA6-201ENST00000384033 151 ntBASIC2.13□□□□□ -2.07
SLC6A11P48066 SNORA48.3-201ENST00000391081 134 ntBASIC2.13□□□□□ -2.07
SLC6A11P48066 RNA5SP89-201ENST00000410300 108 ntBASIC2.13□□□□□ -2.07
SLC6A11P48066 RNU6-554P-201ENST00000410466 106 ntBASIC2.13□□□□□ -2.07
SLC6A11P48066 AL022718.1-201ENST00000412004 84 ntBASIC2.13□□□□□ -2.07
SLC6A11P48066 RNU6-168P-201ENST00000516189 101 ntBASIC2.13□□□□□ -2.07
SLC6A11P48066 RNU2-19P-201ENST00000517288 84 ntBASIC2.13□□□□□ -2.07
SLC6A11P48066 MIR548AR-201ENST00000582191 57 ntBASIC2.13□□□□□ -2.07
SLC6A11P48066 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.13□□□□□ -2.07
SLC6A11P48066 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
SLC6A11P48066 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
SLC6A11P48066 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
SLC6A11P48066 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.13□□□□□ -2.07
SLC6A11P48066 AC092881.1-201ENST00000638218 2733 ntBASIC2.12□□□□□ -2.07
SLC6A11P48066 Y_RNA.49-201ENST00000362714 112 ntBASIC2.12□□□□□ -2.07
SLC6A11P48066 RNU6-106P-201ENST00000384405 107 ntBASIC2.12□□□□□ -2.07
SLC6A11P48066 MIR144-201ENST00000384886 86 ntBASIC2.12□□□□□ -2.07
SLC6A11P48066 U8.13-201ENST00000390842 128 ntBASIC2.12□□□□□ -2.07
SLC6A11P48066 RNA5SP144-201ENST00000410846 116 ntBASIC2.12□□□□□ -2.07
SLC6A11P48066 HMGN2P23-201ENST00000456759 269 ntBASIC2.12□□□□□ -2.07
SLC6A11P48066 AC055731.1-201ENST00000474387 401 ntBASIC2.12□□□□□ -2.07
SLC6A11P48066 SNORA31.4-201ENST00000516049 129 ntBASIC2.12□□□□□ -2.07
SLC6A11P48066 MIR4287-201ENST00000579398 78 ntBASIC2.12□□□□□ -2.07
SLC6A11P48066 MIR3163-201ENST00000581592 73 ntBASIC2.12□□□□□ -2.07
SLC6A11P48066 MIR6895-201ENST00000613497 78 ntBASIC2.12□□□□□ -2.07
SLC6A11P48066 RNU6-32P-201ENST00000383948 107 ntBASIC2.11□□□□□ -2.07
SLC6A11P48066 RNU6-13P-201ENST00000384248 107 ntBASIC2.11□□□□□ -2.07
SLC6A11P48066 RNU6-12P-201ENST00000384604 107 ntBASIC2.11□□□□□ -2.07
SLC6A11P48066 RNU6-41P-201ENST00000384741 107 ntBASIC2.11□□□□□ -2.07
SLC6A11P48066 RPS29P29-201ENST00000456396 171 ntBASIC2.11□□□□□ -2.07
SLC6A11P48066 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC2.11□□□□□ -2.07
SLC6A11P48066 RPL39P34-201ENST00000477141 156 ntBASIC2.11□□□□□ -2.07
SLC6A11P48066 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.11□□□□□ -2.07
SLC6A11P48066 RNU7-53P-201ENST00000516705 60 ntBASIC2.11□□□□□ -2.07
SLC6A11P48066 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC2.11□□□□□ -2.07
SLC6A11P48066 Y_RNA.163-201ENST00000363702 113 ntBASIC2.1□□□□□ -2.07
SLC6A11P48066 Y_RNA.495-201ENST00000384435 112 ntBASIC2.1□□□□□ -2.07
SLC6A11P48066 MIR548D2-201ENST00000384955 97 ntBASIC2.1□□□□□ -2.07
SLC6A11P48066 RNU6-360P-201ENST00000390944 104 ntBASIC2.1□□□□□ -2.07
SLC6A11P48066 RNU7-6P-201ENST00000516845 62 ntBASIC2.1□□□□□ -2.07
SLC6A11P48066 RNU6-295P-201ENST00000516901 104 ntBASIC2.1□□□□□ -2.07
SLC6A11P48066 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.1□□□□□ -2.07
SLC6A11P48066 MIR5694-201ENST00000581190 76 ntBASIC2.1□□□□□ -2.07
SLC6A11P48066 AL513534.2-201ENST00000603836 250 ntBASIC2.1□□□□□ -2.07
SLC6A11P48066 MIR4791-201ENST00000607666 84 ntBASIC2.1□□□□□ -2.07
SLC6A11P48066 AC243994.1-201ENST00000618627 109 ntBASIC2.1□□□□□ -2.07
SLC6A11P48066 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.09□□□□□ -2.07
SLC6A11P48066 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.09□□□□□ -2.07
SLC6A11P48066 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.07
SLC6A11P48066 RNU6-203P-201ENST00000384038 104 ntBASIC2.09□□□□□ -2.07
SLC6A11P48066 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.09□□□□□ -2.07
SLC6A11P48066 MIR1302-5-201ENST00000408164 150 ntBASIC2.09□□□□□ -2.07
SLC6A11P48066 AL512326.2-201ENST00000426359 151 ntBASIC2.09□□□□□ -2.07
SLC6A11P48066 RPL23AP6-201ENST00000446637 472 ntBASIC2.09□□□□□ -2.07
SLC6A11P48066 AC121758.2-201ENST00000553271 193 ntBASIC2.09□□□□□ -2.07
SLC6A11P48066 SNRPGP19-201ENST00000603826 189 ntBASIC2.09□□□□□ -2.07
SLC6A11P48066 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.09□□□□□ -2.07
SLC6A11P48066 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
SLC6A11P48066 MIRLET7G-201ENST00000362280 84 ntBASIC2.08□□□□□ -2.08
SLC6A11P48066 Y_RNA.338-201ENST00000365320 114 ntBASIC2.08□□□□□ -2.08
SLC6A11P48066 Y_RNA.344-201ENST00000365381 112 ntBASIC2.08□□□□□ -2.08
SLC6A11P48066 RNU6-1014P-201ENST00000383940 103 ntBASIC2.08□□□□□ -2.08
SLC6A11P48066 RNU6-756P-201ENST00000383997 107 ntBASIC2.08□□□□□ -2.08
SLC6A11P48066 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.08□□□□□ -2.08
SLC6A11P48066 RNU6-1190P-201ENST00000410811 104 ntBASIC2.08□□□□□ -2.08
SLC6A11P48066 RNA5SP170-201ENST00000517150 101 ntBASIC2.08□□□□□ -2.08
SLC6A11P48066 RNU6-537P-201ENST00000517277 103 ntBASIC2.08□□□□□ -2.08
SLC6A11P48066 AC004812.1-201ENST00000540773 146 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 297 ms