Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.96□□□□□ -2.26
O00370 AC022709.1-201ENST00000615967 87 ntBASIC0.96□□□□□ -2.26
O00370 MTND1P7-201ENST00000632801 297 ntBASIC0.96□□□□□ -2.26
O00370 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.96□□□□□ -2.26
O00370 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.96□□□□□ -2.26
O00370 MIR373-201ENST00000362273 69 ntBASIC0.95□□□□□ -2.26
O00370 Y_RNA.193-201ENST00000363979 102 ntBASIC0.95□□□□□ -2.26
O00370 RNU6-654P-201ENST00000364373 107 ntBASIC0.95□□□□□ -2.26
O00370 Y_RNA.634-201ENST00000364811 113 ntBASIC0.95□□□□□ -2.26
O00370 RNU6-484P-201ENST00000384016 107 ntBASIC0.95□□□□□ -2.26
O00370 Y_RNA.447-201ENST00000384184 113 ntBASIC0.95□□□□□ -2.26
O00370 Y_RNA.494-201ENST00000384432 111 ntBASIC0.95□□□□□ -2.26
O00370 Y_RNA.539-201ENST00000384635 107 ntBASIC0.95□□□□□ -2.26
O00370 MIR548J-201ENST00000408833 112 ntBASIC0.95□□□□□ -2.26
O00370 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.95□□□□□ -2.26
O00370 AL138752.1-201ENST00000452964 351 ntBASIC0.95□□□□□ -2.26
O00370 RNU6-126P-201ENST00000516685 103 ntBASIC0.95□□□□□ -2.26
O00370 RNU6-958P-201ENST00000516995 106 ntBASIC0.95□□□□□ -2.26
O00370 AP003484.1-201ENST00000530974 250 ntBASIC0.95□□□□□ -2.26
O00370 MIR548AO-201ENST00000579992 96 ntBASIC0.95□□□□□ -2.26
O00370 PRELID3BP2-201ENST00000605362 201 ntBASIC0.95□□□□□ -2.26
O00370 MIR6857-201ENST00000613267 93 ntBASIC0.95□□□□□ -2.26
O00370 Y_RNA.7-201ENST00000362352 102 ntBASIC0.94□□□□□ -2.26
O00370 Y_RNA.37-201ENST00000362606 108 ntBASIC0.94□□□□□ -2.26
O00370 RNU6-1187P-201ENST00000364771 110 ntBASIC0.94□□□□□ -2.26
O00370 RNU6-728P-201ENST00000365375 104 ntBASIC0.94□□□□□ -2.26
O00370 Y_RNA.452-201ENST00000384202 108 ntBASIC0.94□□□□□ -2.26
O00370 SNORA2B-201ENST00000384583 137 ntBASIC0.94□□□□□ -2.26
O00370 MIR548A2-201ENST00000384956 97 ntBASIC0.94□□□□□ -2.26
O00370 SNORD12-201ENST00000391002 90 ntBASIC0.94□□□□□ -2.26
O00370 RNU6-994P-201ENST00000410507 111 ntBASIC0.94□□□□□ -2.26
O00370 SNRPGP8-201ENST00000454064 226 ntBASIC0.94□□□□□ -2.26
O00370 MIR3973-201ENST00000579824 107 ntBASIC0.94□□□□□ -2.26
O00370 MIR151B-201ENST00000584249 96 ntBASIC0.94□□□□□ -2.26
O00370 SEPT14P17-201ENST00000617978 177 ntBASIC0.94□□□□□ -2.26
O00370 MIR6788-201ENST00000618842 66 ntBASIC0.94□□□□□ -2.26
O00370 MIR6515-201ENST00000619843 57 ntBASIC0.94□□□□□ -2.26
O00370 AC134878.1-201ENST00000619901 243 ntBASIC0.94□□□□□ -2.26
O00370 SNORD114-24-201ENST00000365029 72 ntBASIC0.93□□□□□ -2.26
O00370 SNORD24-201ENST00000383884 75 ntBASIC0.93□□□□□ -2.26
O00370 RNY3P5-201ENST00000384127 102 ntBASIC0.93□□□□□ -2.26
O00370 RNU6-463P-201ENST00000384340 107 ntBASIC0.93□□□□□ -2.26
O00370 Y_RNA.537-201ENST00000384626 109 ntBASIC0.93□□□□□ -2.26
O00370 MIR19B1-201ENST00000384829 87 ntBASIC0.93□□□□□ -2.26
O00370 Y_RNA.626-201ENST00000411288 95 ntBASIC0.93□□□□□ -2.26
O00370 POLR2J4-204ENST00000418424 324 ntBASIC0.93□□□□□ -2.26
O00370 Y_RNA.797-201ENST00000515977 94 ntBASIC0.93□□□□□ -2.26
O00370 SNORA18.4-201ENST00000516440 124 ntBASIC0.93□□□□□ -2.26
O00370 RNU6-111P-201ENST00000517179 105 ntBASIC0.93□□□□□ -2.26
O00370 MIR4698-201ENST00000577795 80 ntBASIC0.93□□□□□ -2.26
O00370 FAM71BP1-201ENST00000604431 523 ntBASIC0.93□□□□□ -2.26
O00370 AC011921.3-201ENST00000605540 361 ntBASIC0.93□□□□□ -2.26
O00370 AL020996.3-201ENST00000606617 222 ntBASIC0.93□□□□□ -2.26
O00370 RNU6-94P-201ENST00000607728 107 ntBASIC0.93□□□□□ -2.26
O00370 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
O00370 SNORD115-34-201ENST00000362441 82 ntBASIC0.92□□□□□ -2.26
O00370 Y_RNA.20-201ENST00000362479 113 ntBASIC0.92□□□□□ -2.26
O00370 SNORD115-12-201ENST00000362583 82 ntBASIC0.92□□□□□ -2.26
O00370 SNORD115-29-201ENST00000362834 82 ntBASIC0.92□□□□□ -2.26
O00370 Y_RNA.66-201ENST00000362862 102 ntBASIC0.92□□□□□ -2.26
O00370 SNORD115-9-201ENST00000362912 82 ntBASIC0.92□□□□□ -2.26
O00370 SNORD115-21-201ENST00000362963 81 ntBASIC0.92□□□□□ -2.26
O00370 RNU6-888P-201ENST00000363010 101 ntBASIC0.92□□□□□ -2.26
O00370 SNORD115-14-201ENST00000363090 81 ntBASIC0.92□□□□□ -2.26
O00370 SNORD115-13-201ENST00000363358 82 ntBASIC0.92□□□□□ -2.26
O00370 SNORD115-41-201ENST00000363608 82 ntBASIC0.92□□□□□ -2.26
O00370 SNORD115-11-201ENST00000363616 82 ntBASIC0.92□□□□□ -2.26
O00370 SNORD115-5-201ENST00000363633 82 ntBASIC0.92□□□□□ -2.26
O00370 SNORD115-39-201ENST00000363694 82 ntBASIC0.92□□□□□ -2.26
O00370 SNORD115-4-201ENST00000363810 82 ntBASIC0.92□□□□□ -2.26
O00370 Y_RNA.182-201ENST00000363880 111 ntBASIC0.92□□□□□ -2.26
O00370 SNORD115-16-201ENST00000363887 82 ntBASIC0.92□□□□□ -2.26
O00370 SNORD115-6-201ENST00000363942 82 ntBASIC0.92□□□□□ -2.26
O00370 SNORD115-42-201ENST00000364273 82 ntBASIC0.92□□□□□ -2.26
O00370 SNORD115-15-201ENST00000364809 81 ntBASIC0.92□□□□□ -2.26
O00370 SNORD115-1-201ENST00000364961 82 ntBASIC0.92□□□□□ -2.26
O00370 SNORD115-26-201ENST00000365067 82 ntBASIC0.92□□□□□ -2.26
O00370 SNORD115-10-201ENST00000365073 81 ntBASIC0.92□□□□□ -2.26
O00370 SNORD115-43-201ENST00000365503 82 ntBASIC0.92□□□□□ -2.26
O00370 SNORD115-36-201ENST00000365629 82 ntBASIC0.92□□□□□ -2.26
O00370 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.92□□□□□ -2.26
O00370 PDCD5P2-201ENST00000507570 312 ntBASIC0.92□□□□□ -2.26
O00370 RNU6-1223P-201ENST00000517124 104 ntBASIC0.92□□□□□ -2.26
O00370 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC0.92□□□□□ -2.26
O00370 MIR3129-201ENST00000581095 76 ntBASIC0.92□□□□□ -2.26
O00370 SNORD115-40-201ENST00000606510 82 ntBASIC0.92□□□□□ -2.26
O00370 MIR6516-201ENST00000630554 81 ntBASIC0.92□□□□□ -2.26
O00370 AL442644.1-201ENST00000454390 3105 ntBASIC0.92□□□□□ -2.26
O00370 Y_RNA.23-201ENST00000362496 106 ntBASIC0.91□□□□□ -2.26
O00370 RNU6-103P-201ENST00000363686 107 ntBASIC0.91□□□□□ -2.26
O00370 RNY4P28-201ENST00000365281 93 ntBASIC0.91□□□□□ -2.26
O00370 Y_RNA.354-201ENST00000365448 111 ntBASIC0.91□□□□□ -2.26
O00370 SNORA27-201ENST00000384323 126 ntBASIC0.91□□□□□ -2.26
O00370 Y_RNA.478-201ENST00000384358 107 ntBASIC0.91□□□□□ -2.26
O00370 RNU6-205P-201ENST00000390858 107 ntBASIC0.91□□□□□ -2.26
O00370 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.91□□□□□ -2.26
O00370 RNU2-55P-201ENST00000411146 174 ntBASIC0.91□□□□□ -2.26
O00370 AF228730.3-201ENST00000436691 102 ntBASIC0.91□□□□□ -2.26
O00370 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.91□□□□□ -2.26
O00370 AC087499.4-201ENST00000448505 178 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 264 ms