Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.66□□□□□ -2.3
TMX2-CTNND1H3BSU7 Y_RNA.14-201ENST00000362415 103 ntBASIC0.65□□□□□ -2.31
TMX2-CTNND1H3BSU7 RNU6-888P-201ENST00000363010 101 ntBASIC0.65□□□□□ -2.31
TMX2-CTNND1H3BSU7 Y_RNA.91-201ENST00000363042 107 ntBASIC0.65□□□□□ -2.31
TMX2-CTNND1H3BSU7 SNORD114-23-201ENST00000363536 72 ntBASIC0.65□□□□□ -2.31
TMX2-CTNND1H3BSU7 Y_RNA.370-201ENST00000365589 108 ntBASIC0.65□□□□□ -2.31
TMX2-CTNND1H3BSU7 SNORD24-201ENST00000383884 75 ntBASIC0.65□□□□□ -2.31
TMX2-CTNND1H3BSU7 Y_RNA.416-201ENST00000384014 113 ntBASIC0.65□□□□□ -2.31
TMX2-CTNND1H3BSU7 Y_RNA.539-201ENST00000384635 107 ntBASIC0.65□□□□□ -2.31
TMX2-CTNND1H3BSU7 RNU6-713P-201ENST00000384761 107 ntBASIC0.65□□□□□ -2.31
TMX2-CTNND1H3BSU7 MIR193B-201ENST00000384907 83 ntBASIC0.65□□□□□ -2.31
TMX2-CTNND1H3BSU7 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.65□□□□□ -2.31
TMX2-CTNND1H3BSU7 RNU6-327P-201ENST00000516270 127 ntBASIC0.65□□□□□ -2.31
TMX2-CTNND1H3BSU7 Y_RNA.680-201ENST00000516441 93 ntBASIC0.65□□□□□ -2.31
TMX2-CTNND1H3BSU7 RNU6-1007P-201ENST00000516586 107 ntBASIC0.65□□□□□ -2.31
TMX2-CTNND1H3BSU7 RNU11-2P-201ENST00000516898 142 ntBASIC0.65□□□□□ -2.31
TMX2-CTNND1H3BSU7 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.65□□□□□ -2.31
TMX2-CTNND1H3BSU7 AC109810.1-201ENST00000534066 224 ntBASIC0.65□□□□□ -2.31
TMX2-CTNND1H3BSU7 MIR376A2-201ENST00000636782 80 ntBASIC0.65□□□□□ -2.31
TMX2-CTNND1H3BSU7 AC010487.4-201ENST00000637027 61 ntBASIC0.65□□□□□ -2.31
TMX2-CTNND1H3BSU7 RNU6-369P-201ENST00000362515 102 ntBASIC0.64□□□□□ -2.31
TMX2-CTNND1H3BSU7 Y_RNA.37-201ENST00000362606 108 ntBASIC0.64□□□□□ -2.31
TMX2-CTNND1H3BSU7 SNORD45.3-201ENST00000363836 72 ntBASIC0.64□□□□□ -2.31
TMX2-CTNND1H3BSU7 Y_RNA.277-201ENST00000364754 102 ntBASIC0.64□□□□□ -2.31
TMX2-CTNND1H3BSU7 Y_RNA.634-201ENST00000364811 113 ntBASIC0.64□□□□□ -2.31
TMX2-CTNND1H3BSU7 RNU6-580P-201ENST00000365159 107 ntBASIC0.64□□□□□ -2.31
TMX2-CTNND1H3BSU7 Y_RNA.352-201ENST00000365439 102 ntBASIC0.64□□□□□ -2.31
TMX2-CTNND1H3BSU7 MIR616-201ENST00000385293 97 ntBASIC0.64□□□□□ -2.31
TMX2-CTNND1H3BSU7 RNU6-613P-201ENST00000410412 108 ntBASIC0.64□□□□□ -2.31
TMX2-CTNND1H3BSU7 RNU2-55P-201ENST00000411146 174 ntBASIC0.64□□□□□ -2.31
TMX2-CTNND1H3BSU7 AC244023.1-201ENST00000426884 112 ntBASIC0.64□□□□□ -2.31
TMX2-CTNND1H3BSU7 AF228730.3-201ENST00000436691 102 ntBASIC0.64□□□□□ -2.31
TMX2-CTNND1H3BSU7 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.64□□□□□ -2.31
TMX2-CTNND1H3BSU7 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.64□□□□□ -2.31
TMX2-CTNND1H3BSU7 SNORA18.4-201ENST00000516440 124 ntBASIC0.64□□□□□ -2.31
TMX2-CTNND1H3BSU7 MIR4662B-201ENST00000579498 81 ntBASIC0.64□□□□□ -2.31
TMX2-CTNND1H3BSU7 MIR4719-201ENST00000585233 84 ntBASIC0.64□□□□□ -2.31
TMX2-CTNND1H3BSU7 AC006006.1-201ENST00000603082 144 ntBASIC0.64□□□□□ -2.31
TMX2-CTNND1H3BSU7 AC242498.1-201ENST00000604134 111 ntBASIC0.64□□□□□ -2.31
TMX2-CTNND1H3BSU7 MIR8055-201ENST00000610739 97 ntBASIC0.64□□□□□ -2.31
TMX2-CTNND1H3BSU7 AC243994.1-201ENST00000618627 109 ntBASIC0.64□□□□□ -2.31
TMX2-CTNND1H3BSU7 AL589743.1-201ENST00000551932 2712 ntBASIC0.64□□□□□ -2.31
TMX2-CTNND1H3BSU7 SNORD115-28-201ENST00000363931 81 ntBASIC0.63□□□□□ -2.31
TMX2-CTNND1H3BSU7 Y_RNA.242-201ENST00000364473 110 ntBASIC0.63□□□□□ -2.31
TMX2-CTNND1H3BSU7 SNORD114-24-201ENST00000365029 72 ntBASIC0.63□□□□□ -2.31
TMX2-CTNND1H3BSU7 RNY4P28-201ENST00000365281 93 ntBASIC0.63□□□□□ -2.31
TMX2-CTNND1H3BSU7 RNU6-1335P-201ENST00000365426 107 ntBASIC0.63□□□□□ -2.31
TMX2-CTNND1H3BSU7 RNU6-125P-201ENST00000384505 107 ntBASIC0.63□□□□□ -2.31
TMX2-CTNND1H3BSU7 MIR200A-201ENST00000384875 90 ntBASIC0.63□□□□□ -2.31
TMX2-CTNND1H3BSU7 RNU6-913P-201ENST00000390913 95 ntBASIC0.63□□□□□ -2.31
TMX2-CTNND1H3BSU7 RNA5SP95-201ENST00000410319 137 ntBASIC0.63□□□□□ -2.31
TMX2-CTNND1H3BSU7 AC006461.1-201ENST00000412637 326 ntBASIC0.63□□□□□ -2.31
TMX2-CTNND1H3BSU7 AL035398.1-201ENST00000430869 322 ntBASIC0.63□□□□□ -2.31
TMX2-CTNND1H3BSU7 SNORD36C-201ENST00000516733 66 ntBASIC0.63□□□□□ -2.31
TMX2-CTNND1H3BSU7 AC023827.1-201ENST00000569247 97 ntBASIC0.63□□□□□ -2.31
TMX2-CTNND1H3BSU7 MIR1273G-201ENST00000577677 100 ntBASIC0.63□□□□□ -2.31
TMX2-CTNND1H3BSU7 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
TMX2-CTNND1H3BSU7 SNORD115-34-201ENST00000362441 82 ntBASIC0.62□□□□□ -2.31
TMX2-CTNND1H3BSU7 Y_RNA.23-201ENST00000362496 106 ntBASIC0.62□□□□□ -2.31
TMX2-CTNND1H3BSU7 SNORD115-12-201ENST00000362583 82 ntBASIC0.62□□□□□ -2.31
TMX2-CTNND1H3BSU7 SNORD115-29-201ENST00000362834 82 ntBASIC0.62□□□□□ -2.31
TMX2-CTNND1H3BSU7 SNORD115-9-201ENST00000362912 82 ntBASIC0.62□□□□□ -2.31
TMX2-CTNND1H3BSU7 SNORD115-21-201ENST00000362963 81 ntBASIC0.62□□□□□ -2.31
TMX2-CTNND1H3BSU7 SNORD115-14-201ENST00000363090 81 ntBASIC0.62□□□□□ -2.31
TMX2-CTNND1H3BSU7 SNORD115-13-201ENST00000363358 82 ntBASIC0.62□□□□□ -2.31
TMX2-CTNND1H3BSU7 Y_RNA.149-201ENST00000363558 117 ntBASIC0.62□□□□□ -2.31
TMX2-CTNND1H3BSU7 SNORD115-41-201ENST00000363608 82 ntBASIC0.62□□□□□ -2.31
TMX2-CTNND1H3BSU7 SNORD115-11-201ENST00000363616 82 ntBASIC0.62□□□□□ -2.31
TMX2-CTNND1H3BSU7 SNORD115-5-201ENST00000363633 82 ntBASIC0.62□□□□□ -2.31
TMX2-CTNND1H3BSU7 SNORD115-39-201ENST00000363694 82 ntBASIC0.62□□□□□ -2.31
TMX2-CTNND1H3BSU7 SNORD115-4-201ENST00000363810 82 ntBASIC0.62□□□□□ -2.31
TMX2-CTNND1H3BSU7 SNORD115-16-201ENST00000363887 82 ntBASIC0.62□□□□□ -2.31
TMX2-CTNND1H3BSU7 SNORD115-6-201ENST00000363942 82 ntBASIC0.62□□□□□ -2.31
TMX2-CTNND1H3BSU7 SNORD115-42-201ENST00000364273 82 ntBASIC0.62□□□□□ -2.31
TMX2-CTNND1H3BSU7 SNORD115-15-201ENST00000364809 81 ntBASIC0.62□□□□□ -2.31
TMX2-CTNND1H3BSU7 SNORD115-1-201ENST00000364961 82 ntBASIC0.62□□□□□ -2.31
TMX2-CTNND1H3BSU7 SNORD115-26-201ENST00000365067 82 ntBASIC0.62□□□□□ -2.31
TMX2-CTNND1H3BSU7 SNORD115-10-201ENST00000365073 81 ntBASIC0.62□□□□□ -2.31
TMX2-CTNND1H3BSU7 Y_RNA.330-201ENST00000365230 109 ntBASIC0.62□□□□□ -2.31
TMX2-CTNND1H3BSU7 SNORD115-43-201ENST00000365503 82 ntBASIC0.62□□□□□ -2.31
TMX2-CTNND1H3BSU7 SNORD115-36-201ENST00000365629 82 ntBASIC0.62□□□□□ -2.31
TMX2-CTNND1H3BSU7 RNY3P5-201ENST00000384127 102 ntBASIC0.62□□□□□ -2.31
TMX2-CTNND1H3BSU7 SNORA51.10-201ENST00000384418 136 ntBASIC0.62□□□□□ -2.31
TMX2-CTNND1H3BSU7 MIR802-201ENST00000390235 94 ntBASIC0.62□□□□□ -2.31
TMX2-CTNND1H3BSU7 AL606845.1-201ENST00000404881 255 ntBASIC0.62□□□□□ -2.31
TMX2-CTNND1H3BSU7 Y_RNA.590-201ENST00000410140 107 ntBASIC0.62□□□□□ -2.31
TMX2-CTNND1H3BSU7 RNU6-847P-201ENST00000411115 108 ntBASIC0.62□□□□□ -2.31
TMX2-CTNND1H3BSU7 AC087499.4-201ENST00000448505 178 ntBASIC0.62□□□□□ -2.31
TMX2-CTNND1H3BSU7 RNU6-693P-201ENST00000516134 107 ntBASIC0.62□□□□□ -2.31
TMX2-CTNND1H3BSU7 RNY3P16-201ENST00000516338 101 ntBASIC0.62□□□□□ -2.31
TMX2-CTNND1H3BSU7 RNA5SP255-201ENST00000516370 107 ntBASIC0.62□□□□□ -2.31
TMX2-CTNND1H3BSU7 AC004812.1-201ENST00000540773 146 ntBASIC0.62□□□□□ -2.31
TMX2-CTNND1H3BSU7 SNORD115-40-201ENST00000606510 82 ntBASIC0.62□□□□□ -2.31
TMX2-CTNND1H3BSU7 AL442067.1-201ENST00000613261 223 ntBASIC0.62□□□□□ -2.31
TMX2-CTNND1H3BSU7 Y_RNA.162-201ENST00000363683 102 ntBASIC0.61□□□□□ -2.31
TMX2-CTNND1H3BSU7 RNA5SP325-201ENST00000363756 130 ntBASIC0.61□□□□□ -2.31
TMX2-CTNND1H3BSU7 Y_RNA.292-201ENST00000364904 97 ntBASIC0.61□□□□□ -2.31
TMX2-CTNND1H3BSU7 SNORA1.2-201ENST00000365189 134 ntBASIC0.61□□□□□ -2.31
TMX2-CTNND1H3BSU7 SNORA1-201ENST00000384107 130 ntBASIC0.61□□□□□ -2.31
TMX2-CTNND1H3BSU7 MIR100-201ENST00000385259 80 ntBASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 182.7 ms