Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 RPS3AP1-201ENST00000413190 320 ntBASIC2.21□□□□□ -2.06
SHISA3A0PJX4 SNORA31.11-201ENST00000516528 139 ntBASIC2.21□□□□□ -2.06
SHISA3A0PJX4 Y_RNA.773-201ENST00000607168 90 ntBASIC2.21□□□□□ -2.06
SHISA3A0PJX4 MIR1255B1-201ENST00000636325 63 ntBASIC2.21□□□□□ -2.06
SHISA3A0PJX4 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.2□□□□□ -2.06
SHISA3A0PJX4 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.2□□□□□ -2.06
SHISA3A0PJX4 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
SHISA3A0PJX4 MIR21-201ENST00000362134 72 ntBASIC2.2□□□□□ -2.06
SHISA3A0PJX4 SNORA5B-201ENST00000363786 132 ntBASIC2.2□□□□□ -2.06
SHISA3A0PJX4 SNORA80A-201ENST00000363922 136 ntBASIC2.2□□□□□ -2.06
SHISA3A0PJX4 RNU6-457P-201ENST00000363999 107 ntBASIC2.2□□□□□ -2.06
SHISA3A0PJX4 Y_RNA.360-201ENST00000365512 102 ntBASIC2.2□□□□□ -2.06
SHISA3A0PJX4 Y_RNA.466-201ENST00000384294 113 ntBASIC2.2□□□□□ -2.06
SHISA3A0PJX4 Y_RNA.470-201ENST00000384307 117 ntBASIC2.2□□□□□ -2.06
SHISA3A0PJX4 RNU2-19P-201ENST00000517288 84 ntBASIC2.2□□□□□ -2.06
SHISA3A0PJX4 MIR548AE2-201ENST00000583456 67 ntBASIC2.2□□□□□ -2.06
SHISA3A0PJX4 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.2□□□□□ -2.06
SHISA3A0PJX4 RNU6-49P-201ENST00000384256 107 ntBASIC2.19□□□□□ -2.06
SHISA3A0PJX4 AL023284.1-201ENST00000403956 276 ntBASIC2.19□□□□□ -2.06
SHISA3A0PJX4 RNU6-1190P-201ENST00000410811 104 ntBASIC2.19□□□□□ -2.06
SHISA3A0PJX4 AC011753.1-201ENST00000451001 220 ntBASIC2.19□□□□□ -2.06
SHISA3A0PJX4 SNORA59A-201ENST00000459326 152 ntBASIC2.19□□□□□ -2.06
SHISA3A0PJX4 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.19□□□□□ -2.06
SHISA3A0PJX4 ELOCP29-201ENST00000588193 334 ntBASIC2.19□□□□□ -2.06
SHISA3A0PJX4 AL513534.2-201ENST00000603836 250 ntBASIC2.19□□□□□ -2.06
SHISA3A0PJX4 AC245884.12-201ENST00000615364 59 ntBASIC2.19□□□□□ -2.06
SHISA3A0PJX4 SNORA1.1-201ENST00000364671 133 ntBASIC2.18□□□□□ -2.06
SHISA3A0PJX4 MIR488-201ENST00000365739 83 ntBASIC2.18□□□□□ -2.06
SHISA3A0PJX4 RNA5SP367-201ENST00000516557 118 ntBASIC2.18□□□□□ -2.06
SHISA3A0PJX4 RNU6-1018P-201ENST00000516577 106 ntBASIC2.18□□□□□ -2.06
SHISA3A0PJX4 MIR8055-201ENST00000610739 97 ntBASIC2.18□□□□□ -2.06
SHISA3A0PJX4 AC008133.2-201ENST00000624540 351 ntBASIC2.18□□□□□ -2.06
SHISA3A0PJX4 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
SHISA3A0PJX4 RNU6-832P-201ENST00000363319 107 ntBASIC2.17□□□□□ -2.06
SHISA3A0PJX4 Y_RNA.354-201ENST00000365448 111 ntBASIC2.17□□□□□ -2.06
SHISA3A0PJX4 Y_RNA.377-201ENST00000365644 108 ntBASIC2.17□□□□□ -2.06
SHISA3A0PJX4 MIR194-1-201ENST00000384892 85 ntBASIC2.17□□□□□ -2.06
SHISA3A0PJX4 MIR577-201ENST00000385196 96 ntBASIC2.17□□□□□ -2.06
SHISA3A0PJX4 AC096949.1-201ENST00000412047 152 ntBASIC2.17□□□□□ -2.06
SHISA3A0PJX4 RNU6-917P-201ENST00000516294 104 ntBASIC2.17□□□□□ -2.06
SHISA3A0PJX4 MIR4764-201ENST00000580680 88 ntBASIC2.17□□□□□ -2.06
SHISA3A0PJX4 MALAT1.1-201ENST00000618249 95 ntBASIC2.17□□□□□ -2.06
SHISA3A0PJX4 RNA5SP456-201ENST00000364002 114 ntBASIC2.16□□□□□ -2.06
SHISA3A0PJX4 RNU6-616P-201ENST00000384353 107 ntBASIC2.16□□□□□ -2.06
SHISA3A0PJX4 Y_RNA.500-201ENST00000384466 111 ntBASIC2.16□□□□□ -2.06
SHISA3A0PJX4 Y_RNA.510-201ENST00000384511 114 ntBASIC2.16□□□□□ -2.06
SHISA3A0PJX4 MIR524-201ENST00000385242 87 ntBASIC2.16□□□□□ -2.06
SHISA3A0PJX4 MIR653-201ENST00000385279 96 ntBASIC2.16□□□□□ -2.06
SHISA3A0PJX4 AC087499.2-201ENST00000432861 149 ntBASIC2.16□□□□□ -2.06
SHISA3A0PJX4 RNU6-322P-201ENST00000516010 103 ntBASIC2.16□□□□□ -2.06
SHISA3A0PJX4 FO624990.1-201ENST00000636373 85 ntBASIC2.16□□□□□ -2.06
SHISA3A0PJX4 Z97988.1-201ENST00000637697 135 ntBASIC2.16□□□□□ -2.06
SHISA3A0PJX4 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
SHISA3A0PJX4 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.15□□□□□ -2.07
SHISA3A0PJX4 SNORD73B-201ENST00000364394 72 ntBASIC2.15□□□□□ -2.07
SHISA3A0PJX4 RNU6-203P-201ENST00000384038 104 ntBASIC2.15□□□□□ -2.07
SHISA3A0PJX4 AC004965.1-201ENST00000413033 213 ntBASIC2.15□□□□□ -2.07
SHISA3A0PJX4 MIR1270-201ENST00000459320 83 ntBASIC2.15□□□□□ -2.07
SHISA3A0PJX4 AC055731.1-201ENST00000474387 401 ntBASIC2.15□□□□□ -2.07
SHISA3A0PJX4 GTF3AP2-201ENST00000557014 266 ntBASIC2.15□□□□□ -2.07
SHISA3A0PJX4 AL049779.4-201ENST00000604500 156 ntBASIC2.15□□□□□ -2.07
SHISA3A0PJX4 AL442128.1-201ENST00000615151 90 ntBASIC2.15□□□□□ -2.07
SHISA3A0PJX4 MIR6852-201ENST00000621699 66 ntBASIC2.15□□□□□ -2.07
SHISA3A0PJX4 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
SHISA3A0PJX4 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
SHISA3A0PJX4 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
SHISA3A0PJX4 Y_RNA.96-201ENST00000363092 109 ntBASIC2.14□□□□□ -2.07
SHISA3A0PJX4 MIR520C-201ENST00000385005 87 ntBASIC2.14□□□□□ -2.07
SHISA3A0PJX4 MIR605-201ENST00000385078 83 ntBASIC2.14□□□□□ -2.07
SHISA3A0PJX4 RNU6-679P-201ENST00000391003 106 ntBASIC2.14□□□□□ -2.07
SHISA3A0PJX4 AL353813.1-201ENST00000440700 253 ntBASIC2.14□□□□□ -2.07
SHISA3A0PJX4 RNA5SP57-201ENST00000459463 123 ntBASIC2.14□□□□□ -2.07
SHISA3A0PJX4 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.14□□□□□ -2.07
SHISA3A0PJX4 RNU6-844P-201ENST00000517175 102 ntBASIC2.14□□□□□ -2.07
SHISA3A0PJX4 DEFB122-202ENST00000569013 197 ntBASIC2.14□□□□□ -2.07
SHISA3A0PJX4 MIR4513-201ENST00000581077 86 ntBASIC2.14□□□□□ -2.07
SHISA3A0PJX4 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
SHISA3A0PJX4 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
SHISA3A0PJX4 Y_RNA.342-201ENST00000365352 113 ntBASIC2.13□□□□□ -2.07
SHISA3A0PJX4 RNA5SP212-201ENST00000391223 107 ntBASIC2.13□□□□□ -2.07
SHISA3A0PJX4 SNORA7.5-201ENST00000410672 110 ntBASIC2.13□□□□□ -2.07
SHISA3A0PJX4 AC004941.2-201ENST00000427009 228 ntBASIC2.13□□□□□ -2.07
SHISA3A0PJX4 HMGN1P33-201ENST00000432945 451 ntBASIC2.13□□□□□ -2.07
SHISA3A0PJX4 RNA5SP356-201ENST00000515972 94 ntBASIC2.13□□□□□ -2.07
SHISA3A0PJX4 RNU6-1313P-201ENST00000362622 102 ntBASIC2.12□□□□□ -2.07
SHISA3A0PJX4 SNORD45B-201ENST00000364617 72 ntBASIC2.12□□□□□ -2.07
SHISA3A0PJX4 SNORA18-201ENST00000384416 132 ntBASIC2.12□□□□□ -2.07
SHISA3A0PJX4 MIR9-1-201ENST00000385198 89 ntBASIC2.12□□□□□ -2.07
SHISA3A0PJX4 AL451046.2-201ENST00000403074 277 ntBASIC2.12□□□□□ -2.07
SHISA3A0PJX4 SNORD23.1-201ENST00000408212 104 ntBASIC2.12□□□□□ -2.07
SHISA3A0PJX4 AL161935.2-201ENST00000414627 60 ntBASIC2.12□□□□□ -2.07
SHISA3A0PJX4 UBE2DNL-203ENST00000474922 222 ntBASIC2.12□□□□□ -2.07
SHISA3A0PJX4 AC234781.5-201ENST00000508429 271 ntBASIC2.12□□□□□ -2.07
SHISA3A0PJX4 RNU6-521P-201ENST00000516663 105 ntBASIC2.12□□□□□ -2.07
SHISA3A0PJX4 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.12□□□□□ -2.07
SHISA3A0PJX4 CYP3A52P-201ENST00000563326 91 ntBASIC2.12□□□□□ -2.07
SHISA3A0PJX4 MIR8065-201ENST00000620577 100 ntBASIC2.12□□□□□ -2.07
SHISA3A0PJX4 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
SHISA3A0PJX4 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
SHISA3A0PJX4 SNORA32-201ENST00000384072 121 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 207.9 ms