Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 RNU6-1250P-201ENST00000391218 107 ntBASIC-2.03□□□□□ -2.73
ABCA3Q99758 USMG5P1-201ENST00000425964 177 ntBASIC-2.03□□□□□ -2.73
ABCA3Q99758 RNU7-175P-201ENST00000515915 61 ntBASIC-2.03□□□□□ -2.73
ABCA3Q99758 RNY4-201ENST00000516507 96 ntBASIC-2.03□□□□□ -2.73
ABCA3Q99758 AL137161.1-201ENST00000532231 390 ntBASIC-2.03□□□□□ -2.73
ABCA3Q99758 MIR5696-201ENST00000578474 85 ntBASIC-2.03□□□□□ -2.73
ABCA3Q99758 MIR335-201ENST00000362173 94 ntBASIC-2.04□□□□□ -2.74
ABCA3Q99758 RNY1P16-201ENST00000363063 111 ntBASIC-2.04□□□□□ -2.74
ABCA3Q99758 Y_RNA.190-201ENST00000363964 101 ntBASIC-2.04□□□□□ -2.74
ABCA3Q99758 Y_RNA.223-201ENST00000364290 113 ntBASIC-2.04□□□□□ -2.74
ABCA3Q99758 SNORD114-17-201ENST00000364699 75 ntBASIC-2.04□□□□□ -2.74
ABCA3Q99758 MTND3P21-201ENST00000433774 331 ntBASIC-2.04□□□□□ -2.74
ABCA3Q99758 RNU7-53P-201ENST00000516705 60 ntBASIC-2.04□□□□□ -2.74
ABCA3Q99758 SNORD77.3-201ENST00000391113 65 ntBASIC-2.05□□□□□ -2.74
ABCA3Q99758 MIR548H1-201ENST00000408610 102 ntBASIC-2.05□□□□□ -2.74
ABCA3Q99758 Y_RNA.598-201ENST00000410480 95 ntBASIC-2.05□□□□□ -2.74
ABCA3Q99758 RNU6-531P-201ENST00000516694 104 ntBASIC-2.05□□□□□ -2.74
ABCA3Q99758 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-2.05□□□□□ -2.74
ABCA3Q99758 AC245014.2-201ENST00000603689 287 ntBASIC-2.05□□□□□ -2.74
ABCA3Q99758 AC124312.5-201ENST00000604451 268 ntBASIC-2.05□□□□□ -2.74
ABCA3Q99758 RNU1-141P-201ENST00000364623 158 ntBASIC-2.05□□□□□ -2.74
ABCA3Q99758 RNU6-601P-201ENST00000384540 107 ntBASIC-2.05□□□□□ -2.74
ABCA3Q99758 MIR548O-201ENST00000408583 114 ntBASIC-2.05□□□□□ -2.74
ABCA3Q99758 snoU13.13-201ENST00000458842 104 ntBASIC-2.05□□□□□ -2.74
ABCA3Q99758 SNORD27.1-201ENST00000516319 72 ntBASIC-2.05□□□□□ -2.74
ABCA3Q99758 MTND4P7-201ENST00000523876 130 ntBASIC-2.05□□□□□ -2.74
ABCA3Q99758 MIR2681-201ENST00000581814 105 ntBASIC-2.05□□□□□ -2.74
ABCA3Q99758 AC008536.2-201ENST00000607284 349 ntBASIC-2.05□□□□□ -2.74
ABCA3Q99758 Y_RNA.802-201ENST00000614892 130 ntBASIC-2.05□□□□□ -2.74
ABCA3Q99758 RNA5SP403-201ENST00000363598 108 ntBASIC-2.06□□□□□ -2.74
ABCA3Q99758 Y_RNA.426-201ENST00000384068 113 ntBASIC-2.06□□□□□ -2.74
ABCA3Q99758 RNU6-192P-201ENST00000391253 100 ntBASIC-2.06□□□□□ -2.74
ABCA3Q99758 SNORD2-201ENST00000459163 69 ntBASIC-2.06□□□□□ -2.74
ABCA3Q99758 AC245884.10-201ENST00000597355 337 ntBASIC-2.06□□□□□ -2.74
ABCA3Q99758 AC087752.4-201ENST00000605911 462 ntBASIC-2.06□□□□□ -2.74
ABCA3Q99758 MIR3674-201ENST00000636576 68 ntBASIC-2.06□□□□□ -2.74
ABCA3Q99758 Y_RNA.145-201ENST00000363527 102 ntBASIC-2.07□□□□□ -2.74
ABCA3Q99758 RNU6-1264P-201ENST00000383891 107 ntBASIC-2.07□□□□□ -2.74
ABCA3Q99758 Y_RNA.430-201ENST00000384081 110 ntBASIC-2.07□□□□□ -2.74
ABCA3Q99758 CEP57L1P1-201ENST00000430943 1201 ntBASIC-2.07□□□□□ -2.74
ABCA3Q99758 AC104850.1-201ENST00000435940 476 ntBASIC-2.07□□□□□ -2.74
ABCA3Q99758 RNU7-55P-201ENST00000459426 62 ntBASIC-2.07□□□□□ -2.74
ABCA3Q99758 RPS29P24-201ENST00000486345 171 ntBASIC-2.07□□□□□ -2.74
ABCA3Q99758 RNU4ATAC8P-201ENST00000516196 109 ntBASIC-2.07□□□□□ -2.74
ABCA3Q99758 RNU7-116P-201ENST00000516940 62 ntBASIC-2.07□□□□□ -2.74
ABCA3Q99758 AC091931.1-201ENST00000623488 728 ntBASIC-2.07□□□□□ -2.74
ABCA3Q99758 RNU6-82P-201ENST00000363970 107 ntBASIC-2.08□□□□□ -2.74
ABCA3Q99758 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-2.08□□□□□ -2.74
ABCA3Q99758 MTCO1P29-201ENST00000496868 288 ntBASIC-2.08□□□□□ -2.74
ABCA3Q99758 AL442663.2-201ENST00000554385 511 ntBASIC-2.08□□□□□ -2.74
ABCA3Q99758 MIR4473-201ENST00000583731 91 ntBASIC-2.08□□□□□ -2.74
ABCA3Q99758 AL391262.2-201ENST00000622466 494 ntBASIC-2.08□□□□□ -2.74
ABCA3Q99758 MIR539-201ENST00000365690 78 ntBASIC-2.08□□□□□ -2.74
ABCA3Q99758 RNU6-456P-201ENST00000384493 107 ntBASIC-2.08□□□□□ -2.74
ABCA3Q99758 RNU6-576P-201ENST00000390854 102 ntBASIC-2.08□□□□□ -2.74
ABCA3Q99758 MTCO2P30-201ENST00000503662 364 ntBASIC-2.08□□□□□ -2.74
ABCA3Q99758 RNU6-1247P-201ENST00000516622 98 ntBASIC-2.08□□□□□ -2.74
ABCA3Q99758 Y_RNA.172-201ENST00000363765 102 ntBASIC-2.09□□□□□ -2.74
ABCA3Q99758 RNU6-449P-201ENST00000383914 107 ntBASIC-2.09□□□□□ -2.74
ABCA3Q99758 Y_RNA.547-201ENST00000384654 119 ntBASIC-2.09□□□□□ -2.74
ABCA3Q99758 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC-2.09□□□□□ -2.74
ABCA3Q99758 RNU6-759P-201ENST00000516740 103 ntBASIC-2.09□□□□□ -2.74
ABCA3Q99758 YWHAEP2-201ENST00000580066 112 ntBASIC-2.09□□□□□ -2.74
ABCA3Q99758 AC087683.2-201ENST00000611384 326 ntBASIC-2.09□□□□□ -2.74
ABCA3Q99758 AC007671.2-201ENST00000637344 619 ntBASIC-2.09□□□□□ -2.74
ABCA3Q99758 SNORD115-28-201ENST00000363931 81 ntBASIC-2.1□□□□□ -2.75
ABCA3Q99758 Y_RNA.323-201ENST00000365157 109 ntBASIC-2.1□□□□□ -2.75
ABCA3Q99758 MTATP6P20-201ENST00000414147 562 ntBASIC-2.1□□□□□ -2.75
ABCA3Q99758 RNU6-751P-201ENST00000516382 101 ntBASIC-2.1□□□□□ -2.75
ABCA3Q99758 MIR8068-201ENST00000618032 68 ntBASIC-2.1□□□□□ -2.75
ABCA3Q99758 Y_RNA.247-201ENST00000364500 92 ntBASIC-2.11□□□□□ -2.75
ABCA3Q99758 AL606845.1-201ENST00000404881 255 ntBASIC-2.11□□□□□ -2.75
ABCA3Q99758 AL603910.2-201ENST00000407268 136 ntBASIC-2.11□□□□□ -2.75
ABCA3Q99758 RNU2-9P-201ENST00000410194 145 ntBASIC-2.11□□□□□ -2.75
ABCA3Q99758 DLGAP5P1-201ENST00000430307 464 ntBASIC-2.11□□□□□ -2.75
ABCA3Q99758 MTND3P23-201ENST00000431980 347 ntBASIC-2.11□□□□□ -2.75
ABCA3Q99758 Y_RNA.151-201ENST00000363566 112 ntBASIC-2.11□□□□□ -2.75
ABCA3Q99758 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC-2.11□□□□□ -2.75
ABCA3Q99758 AC073534.2-201ENST00000620377 381 ntBASIC-2.11□□□□□ -2.75
ABCA3Q99758 RNY4P28-201ENST00000365281 93 ntBASIC-2.12□□□□□ -2.75
ABCA3Q99758 MIR626-201ENST00000385032 94 ntBASIC-2.12□□□□□ -2.75
ABCA3Q99758 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC-2.12□□□□□ -2.75
ABCA3Q99758 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC-2.12□□□□□ -2.75
ABCA3Q99758 AC006566.1-201ENST00000608943 513 ntBASIC-2.12□□□□□ -2.75
ABCA3Q99758 RNU6-228P-201ENST00000362700 106 ntBASIC-2.13□□□□□ -2.75
ABCA3Q99758 RNU6-1125P-201ENST00000363601 107 ntBASIC-2.13□□□□□ -2.75
ABCA3Q99758 Y_RNA.214-201ENST00000364201 112 ntBASIC-2.13□□□□□ -2.75
ABCA3Q99758 RNU6-905P-201ENST00000384434 107 ntBASIC-2.13□□□□□ -2.75
ABCA3Q99758 RNU6-790P-201ENST00000384479 105 ntBASIC-2.13□□□□□ -2.75
ABCA3Q99758 RNY3P9-201ENST00000384727 106 ntBASIC-2.13□□□□□ -2.75
ABCA3Q99758 Y_RNA.637-201ENST00000459424 114 ntBASIC-2.13□□□□□ -2.75
ABCA3Q99758 RNU6-1114P-201ENST00000516022 107 ntBASIC-2.13□□□□□ -2.75
ABCA3Q99758 AC141846.1-201ENST00000568348 142 ntBASIC-2.13□□□□□ -2.75
ABCA3Q99758 RNU6-1323P-201ENST00000384025 107 ntBASIC-2.14□□□□□ -2.75
ABCA3Q99758 RNA5SP86-201ENST00000390869 98 ntBASIC-2.14□□□□□ -2.75
ABCA3Q99758 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-2.14□□□□□ -2.75
ABCA3Q99758 MIR548H5-201ENST00000580314 60 ntBASIC-2.14□□□□□ -2.75
ABCA3Q99758 AL357078.3-201ENST00000607528 618 ntBASIC-2.14□□□□□ -2.75
ABCA3Q99758 HULC.1-201ENST00000612720 240 ntBASIC-2.14□□□□□ -2.75
ABCA3Q99758 Y_RNA.7-201ENST00000362352 102 ntBASIC-2.14□□□□□ -2.75
Retrieved 100 of 98,524 protein–RNA pairs in 173 ms