Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.47□□□□□ -2.01
DDX1Q92499 AL596211.1-201ENST00000569873 2277 ntBASIC2.47□□□□□ -2.01
DDX1Q92499 ZNF720P1-201ENST00000562403 1939 ntBASIC2.47□□□□□ -2.01
DDX1Q92499 Y_RNA.344-201ENST00000365381 112 ntBASIC2.47□□□□□ -2.01
DDX1Q92499 RNU6-1104P-201ENST00000384723 104 ntBASIC2.47□□□□□ -2.01
DDX1Q92499 RNY1P7-201ENST00000384743 110 ntBASIC2.47□□□□□ -2.01
DDX1Q92499 MIR520A-201ENST00000384862 85 ntBASIC2.47□□□□□ -2.01
DDX1Q92499 AC245047.3-201ENST00000429428 127 ntBASIC2.47□□□□□ -2.01
DDX1Q92499 MTATP8P2-201ENST00000435212 202 ntBASIC2.47□□□□□ -2.01
DDX1Q92499 AC011753.1-201ENST00000451001 220 ntBASIC2.47□□□□□ -2.01
DDX1Q92499 AL049830.1-201ENST00000468034 425 ntBASIC2.47□□□□□ -2.01
DDX1Q92499 RNU6-1053P-201ENST00000515930 101 ntBASIC2.47□□□□□ -2.01
DDX1Q92499 SUB1P4-201ENST00000566062 339 ntBASIC2.47□□□□□ -2.01
DDX1Q92499 AL442128.1-201ENST00000615151 90 ntBASIC2.47□□□□□ -2.01
DDX1Q92499 MIR6873-201ENST00000622788 63 ntBASIC2.47□□□□□ -2.01
DDX1Q92499 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
DDX1Q92499 SNORA1B-201ENST00000362535 133 ntBASIC2.46□□□□□ -2.02
DDX1Q92499 Y_RNA.298-201ENST00000364960 107 ntBASIC2.46□□□□□ -2.02
DDX1Q92499 RNU6-1189P-201ENST00000383958 107 ntBASIC2.46□□□□□ -2.02
DDX1Q92499 RNA5SP109-201ENST00000391010 116 ntBASIC2.46□□□□□ -2.02
DDX1Q92499 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.46□□□□□ -2.02
DDX1Q92499 AP000942.3-201ENST00000603702 160 ntBASIC2.46□□□□□ -2.02
DDX1Q92499 MIR203B-201ENST00000636080 86 ntBASIC2.46□□□□□ -2.02
DDX1Q92499 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
DDX1Q92499 Y_RNA.37-201ENST00000362606 108 ntBASIC2.45□□□□□ -2.02
DDX1Q92499 RNU6-268P-201ENST00000364174 107 ntBASIC2.45□□□□□ -2.02
DDX1Q92499 U8.5-201ENST00000364528 136 ntBASIC2.45□□□□□ -2.02
DDX1Q92499 SNORA2.2-201ENST00000365473 135 ntBASIC2.45□□□□□ -2.02
DDX1Q92499 Y_RNA.440-201ENST00000384120 114 ntBASIC2.45□□□□□ -2.02
DDX1Q92499 RNU6-950P-201ENST00000384651 107 ntBASIC2.45□□□□□ -2.02
DDX1Q92499 Y_RNA.547-201ENST00000384654 119 ntBASIC2.45□□□□□ -2.02
DDX1Q92499 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
DDX1Q92499 RNU6ATAC17P-201ENST00000516074 71 ntBASIC2.45□□□□□ -2.02
DDX1Q92499 RNU6-970P-201ENST00000516312 107 ntBASIC2.45□□□□□ -2.02
DDX1Q92499 RNU7-25P-201ENST00000516544 62 ntBASIC2.45□□□□□ -2.02
DDX1Q92499 RNA5SP82-201ENST00000516707 92 ntBASIC2.45□□□□□ -2.02
DDX1Q92499 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.45□□□□□ -2.02
DDX1Q92499 AC022217.4-201ENST00000604389 163 ntBASIC2.45□□□□□ -2.02
DDX1Q92499 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.45□□□□□ -2.02
DDX1Q92499 MIR6766-201ENST00000622641 72 ntBASIC2.45□□□□□ -2.02
DDX1Q92499 AL442644.1-201ENST00000454390 3105 ntBASIC2.45□□□□□ -2.02
DDX1Q92499 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.45□□□□□ -2.02
DDX1Q92499 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.44□□□□□ -2.02
DDX1Q92499 RNU6-414P-201ENST00000363705 104 ntBASIC2.44□□□□□ -2.02
DDX1Q92499 Y_RNA.213-201ENST00000364178 111 ntBASIC2.44□□□□□ -2.02
DDX1Q92499 SNORD114-30-201ENST00000364448 72 ntBASIC2.44□□□□□ -2.02
DDX1Q92499 MIR548O-201ENST00000408583 114 ntBASIC2.44□□□□□ -2.02
DDX1Q92499 SNORD36C-201ENST00000516733 66 ntBASIC2.44□□□□□ -2.02
DDX1Q92499 MIR4498-201ENST00000577599 66 ntBASIC2.44□□□□□ -2.02
DDX1Q92499 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.44□□□□□ -2.02
DDX1Q92499 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.44□□□□□ -2.02
DDX1Q92499 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.43□□□□□ -2.02
DDX1Q92499 RNU6-112P-201ENST00000363599 104 ntBASIC2.43□□□□□ -2.02
DDX1Q92499 SNORD115-28-201ENST00000363931 81 ntBASIC2.43□□□□□ -2.02
DDX1Q92499 SNORA63D-201ENST00000364359 132 ntBASIC2.43□□□□□ -2.02
DDX1Q92499 RNA5SP173-201ENST00000364857 136 ntBASIC2.43□□□□□ -2.02
DDX1Q92499 RNU6-690P-201ENST00000365242 106 ntBASIC2.43□□□□□ -2.02
DDX1Q92499 Y_RNA.466-201ENST00000384294 113 ntBASIC2.43□□□□□ -2.02
DDX1Q92499 MIR548D2-201ENST00000384955 97 ntBASIC2.43□□□□□ -2.02
DDX1Q92499 RN7SKP200-201ENST00000410564 320 ntBASIC2.43□□□□□ -2.02
DDX1Q92499 RNA5SP57-201ENST00000459463 123 ntBASIC2.43□□□□□ -2.02
DDX1Q92499 RNU7-28P-201ENST00000516759 62 ntBASIC2.43□□□□□ -2.02
DDX1Q92499 RNA5SP481-201ENST00000516814 122 ntBASIC2.43□□□□□ -2.02
DDX1Q92499 Y_RNA.714-201ENST00000517065 90 ntBASIC2.43□□□□□ -2.02
DDX1Q92499 SUMO2P16-201ENST00000519475 264 ntBASIC2.43□□□□□ -2.02
DDX1Q92499 AP003327.1-201ENST00000529684 127 ntBASIC2.43□□□□□ -2.02
DDX1Q92499 AC021443.1-201ENST00000604478 211 ntBASIC2.43□□□□□ -2.02
DDX1Q92499 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.43□□□□□ -2.02
DDX1Q92499 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
DDX1Q92499 MIR302B-201ENST00000362188 73 ntBASIC2.42□□□□□ -2.02
DDX1Q92499 Y_RNA.118-201ENST00000363300 101 ntBASIC2.42□□□□□ -2.02
DDX1Q92499 Y_RNA.140-201ENST00000363474 103 ntBASIC2.42□□□□□ -2.02
DDX1Q92499 Y_RNA.265-201ENST00000364677 108 ntBASIC2.42□□□□□ -2.02
DDX1Q92499 Y_RNA.508-201ENST00000384502 114 ntBASIC2.42□□□□□ -2.02
DDX1Q92499 RNU6-1152P-201ENST00000384576 107 ntBASIC2.42□□□□□ -2.02
DDX1Q92499 ATP6V0E1P1-201ENST00000412537 226 ntBASIC2.42□□□□□ -2.02
DDX1Q92499 AL606517.2-201ENST00000442855 241 ntBASIC2.42□□□□□ -2.02
DDX1Q92499 RNU7-123P-201ENST00000515911 60 ntBASIC2.42□□□□□ -2.02
DDX1Q92499 SNORA31.4-201ENST00000516049 129 ntBASIC2.42□□□□□ -2.02
DDX1Q92499 AC002984.1-201ENST00000591692 448 ntBASIC2.42□□□□□ -2.02
DDX1Q92499 SNORA28-201ENST00000606769 126 ntBASIC2.42□□□□□ -2.02
DDX1Q92499 MIR8054-201ENST00000620877 86 ntBASIC2.42□□□□□ -2.02
DDX1Q92499 MIR2052-201ENST00000636055 55 ntBASIC2.42□□□□□ -2.02
DDX1Q92499 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
DDX1Q92499 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
DDX1Q92499 MIR337-201ENST00000362281 93 ntBASIC2.41□□□□□ -2.02
DDX1Q92499 Y_RNA.93-201ENST00000363066 109 ntBASIC2.41□□□□□ -2.02
DDX1Q92499 Y_RNA.342-201ENST00000365352 113 ntBASIC2.41□□□□□ -2.02
DDX1Q92499 RNY1P6-201ENST00000384193 109 ntBASIC2.41□□□□□ -2.02
DDX1Q92499 RNA5SP212-201ENST00000391223 107 ntBASIC2.41□□□□□ -2.02
DDX1Q92499 RNU2-35P-201ENST00000516446 142 ntBASIC2.41□□□□□ -2.02
DDX1Q92499 SNORA31.11-201ENST00000516528 139 ntBASIC2.41□□□□□ -2.02
DDX1Q92499 AC022523.2-201ENST00000561045 150 ntBASIC2.41□□□□□ -2.02
DDX1Q92499 MIR3683-201ENST00000580847 82 ntBASIC2.41□□□□□ -2.02
DDX1Q92499 MALAT1.1-201ENST00000618249 95 ntBASIC2.41□□□□□ -2.02
DDX1Q92499 AL162726.3-218ENST00000636401 95 ntBASIC2.41□□□□□ -2.02
DDX1Q92499 RNA5SP276-201ENST00000362580 94 ntBASIC2.4□□□□□ -2.03
DDX1Q92499 Y_RNA.220-201ENST00000364244 109 ntBASIC2.4□□□□□ -2.03
DDX1Q92499 RNU6-442P-201ENST00000383968 104 ntBASIC2.4□□□□□ -2.03
DDX1Q92499 RNU6-820P-201ENST00000384273 107 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 226.9 ms