Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 USP9YP30-201ENST00000430729 455 ntBASIC-0.74□□□□□ -2.53
RFX7Q2KHR2 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC-0.74□□□□□ -2.53
RFX7Q2KHR2 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC-0.74□□□□□ -2.53
RFX7Q2KHR2 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC-0.74□□□□□ -2.53
RFX7Q2KHR2 AC011352.1-201ENST00000512300 793 ntBASIC-0.74□□□□□ -2.53
RFX7Q2KHR2 RNU6-470P-201ENST00000515954 104 ntBASIC-0.74□□□□□ -2.53
RFX7Q2KHR2 RNU6-835P-201ENST00000516974 104 ntBASIC-0.74□□□□□ -2.53
RFX7Q2KHR2 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.74□□□□□ -2.53
RFX7Q2KHR2 AP003072.1-201ENST00000531740 145 ntBASIC-0.74□□□□□ -2.53
RFX7Q2KHR2 MTND5P34-201ENST00000568888 325 ntBASIC-0.74□□□□□ -2.53
RFX7Q2KHR2 AC055872.1-201ENST00000570978 278 ntBASIC-0.74□□□□□ -2.53
RFX7Q2KHR2 MIR101-2-201ENST00000362195 79 ntBASIC-0.75□□□□□ -2.53
RFX7Q2KHR2 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.75□□□□□ -2.53
RFX7Q2KHR2 SNORD114-25-201ENST00000363742 72 ntBASIC-0.75□□□□□ -2.53
RFX7Q2KHR2 Y_RNA.409-201ENST00000383990 98 ntBASIC-0.75□□□□□ -2.53
RFX7Q2KHR2 Y_RNA.446-201ENST00000384178 104 ntBASIC-0.75□□□□□ -2.53
RFX7Q2KHR2 SNORA27-201ENST00000384323 126 ntBASIC-0.75□□□□□ -2.53
RFX7Q2KHR2 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.75□□□□□ -2.53
RFX7Q2KHR2 Y_RNA.615-201ENST00000410769 117 ntBASIC-0.75□□□□□ -2.53
RFX7Q2KHR2 RNU6-1068P-201ENST00000410958 103 ntBASIC-0.75□□□□□ -2.53
RFX7Q2KHR2 RN7SKP298-201ENST00000515950 94 ntBASIC-0.75□□□□□ -2.53
RFX7Q2KHR2 Y_RNA.665-201ENST00000516177 98 ntBASIC-0.75□□□□□ -2.53
RFX7Q2KHR2 RNU6-966P-201ENST00000516479 104 ntBASIC-0.75□□□□□ -2.53
RFX7Q2KHR2 AC131281.1-201ENST00000522984 164 ntBASIC-0.75□□□□□ -2.53
RFX7Q2KHR2 AC127455.1-201ENST00000565496 145 ntBASIC-0.75□□□□□ -2.53
RFX7Q2KHR2 MIR4491-201ENST00000581087 68 ntBASIC-0.75□□□□□ -2.53
RFX7Q2KHR2 AC105081.1-201ENST00000617727 106 ntBASIC-0.75□□□□□ -2.53
RFX7Q2KHR2 AC022960.3-201ENST00000619794 441 ntBASIC-0.75□□□□□ -2.53
RFX7Q2KHR2 RNU6-1301P-201ENST00000362724 104 ntBASIC-0.76□□□□□ -2.53
RFX7Q2KHR2 RNU6-726P-201ENST00000364680 107 ntBASIC-0.76□□□□□ -2.53
RFX7Q2KHR2 MIR601-201ENST00000385256 79 ntBASIC-0.76□□□□□ -2.53
RFX7Q2KHR2 AC023449.1-201ENST00000454464 154 ntBASIC-0.76□□□□□ -2.53
RFX7Q2KHR2 RPL7P42-201ENST00000481005 679 ntBASIC-0.76□□□□□ -2.53
RFX7Q2KHR2 RPS29P24-201ENST00000486345 171 ntBASIC-0.76□□□□□ -2.53
RFX7Q2KHR2 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-0.76□□□□□ -2.53
RFX7Q2KHR2 MIR2355-201ENST00000517199 87 ntBASIC-0.76□□□□□ -2.53
RFX7Q2KHR2 AL080274.1-201ENST00000605565 220 ntBASIC-0.76□□□□□ -2.53
RFX7Q2KHR2 AL162376.1-201ENST00000624117 175 ntBASIC-0.76□□□□□ -2.53
RFX7Q2KHR2 AC073869.9-201ENST00000641610 120 ntBASIC-0.76□□□□□ -2.53
RFX7Q2KHR2 RNU6-874P-201ENST00000362390 105 ntBASIC-0.77□□□□□ -2.53
RFX7Q2KHR2 RNU6-1085P-201ENST00000363576 107 ntBASIC-0.77□□□□□ -2.53
RFX7Q2KHR2 Y_RNA.329-201ENST00000365209 107 ntBASIC-0.77□□□□□ -2.53
RFX7Q2KHR2 SNORD116-9-201ENST00000384000 95 ntBASIC-0.77□□□□□ -2.53
RFX7Q2KHR2 RNU6-926P-201ENST00000384075 107 ntBASIC-0.77□□□□□ -2.53
RFX7Q2KHR2 Y_RNA.456-201ENST00000384232 111 ntBASIC-0.77□□□□□ -2.53
RFX7Q2KHR2 RNU6-842P-201ENST00000384269 107 ntBASIC-0.77□□□□□ -2.53
RFX7Q2KHR2 SNORD116-3-201ENST00000384287 95 ntBASIC-0.77□□□□□ -2.53
RFX7Q2KHR2 SNORD116-8-201ENST00000384365 95 ntBASIC-0.77□□□□□ -2.53
RFX7Q2KHR2 SNORD116-7-201ENST00000384404 95 ntBASIC-0.77□□□□□ -2.53
RFX7Q2KHR2 SNORD116-5-201ENST00000384462 95 ntBASIC-0.77□□□□□ -2.53
RFX7Q2KHR2 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.77□□□□□ -2.53
RFX7Q2KHR2 U8.15-201ENST00000390947 134 ntBASIC-0.77□□□□□ -2.53
RFX7Q2KHR2 Y_RNA.588-201ENST00000391254 102 ntBASIC-0.77□□□□□ -2.53
RFX7Q2KHR2 MIR1278-201ENST00000408753 81 ntBASIC-0.77□□□□□ -2.53
RFX7Q2KHR2 RNU6-437P-201ENST00000459408 95 ntBASIC-0.77□□□□□ -2.53
RFX7Q2KHR2 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.77□□□□□ -2.53
RFX7Q2KHR2 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.77□□□□□ -2.53
RFX7Q2KHR2 RNU7-115P-201ENST00000516433 55 ntBASIC-0.77□□□□□ -2.53
RFX7Q2KHR2 AC068137.3-201ENST00000639191 341 ntBASIC-0.77□□□□□ -2.53
RFX7Q2KHR2 SNORD115-28-201ENST00000363931 81 ntBASIC-0.78□□□□□ -2.53
RFX7Q2KHR2 Y_RNA.310-201ENST00000365063 113 ntBASIC-0.78□□□□□ -2.53
RFX7Q2KHR2 SNORD77.3-201ENST00000391113 65 ntBASIC-0.78□□□□□ -2.53
RFX7Q2KHR2 AC024067.1-201ENST00000426199 223 ntBASIC-0.78□□□□□ -2.53
RFX7Q2KHR2 AL500527.2-201ENST00000454105 95 ntBASIC-0.78□□□□□ -2.53
RFX7Q2KHR2 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-0.78□□□□□ -2.53
RFX7Q2KHR2 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC-0.78□□□□□ -2.53
RFX7Q2KHR2 AP001282.2-201ENST00000616149 309 ntBASIC-0.78□□□□□ -2.53
RFX7Q2KHR2 AL662814.1-201ENST00000617364 121 ntBASIC-0.78□□□□□ -2.53
RFX7Q2KHR2 MIR548AY-201ENST00000617669 107 ntBASIC-0.78□□□□□ -2.53
RFX7Q2KHR2 Y_RNA.414-201ENST00000384011 101 ntBASIC-0.79□□□□□ -2.54
RFX7Q2KHR2 RNU6-10P-201ENST00000384036 107 ntBASIC-0.79□□□□□ -2.54
RFX7Q2KHR2 MTATP6P17-201ENST00000431030 672 ntBASIC-0.79□□□□□ -2.54
RFX7Q2KHR2 SEPT14P3-201ENST00000439401 183 ntBASIC-0.79□□□□□ -2.54
RFX7Q2KHR2 MTND2P22-201ENST00000444325 1033 ntBASIC-0.79□□□□□ -2.54
RFX7Q2KHR2 AL732372.2-207ENST00000445840 183 ntBASIC-0.79□□□□□ -2.54
RFX7Q2KHR2 SEPT14P2-201ENST00000453405 183 ntBASIC-0.79□□□□□ -2.54
RFX7Q2KHR2 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.79□□□□□ -2.54
RFX7Q2KHR2 SEPT14P4-201ENST00000513445 186 ntBASIC-0.79□□□□□ -2.54
RFX7Q2KHR2 SCARNA17-201ENST00000516183 144 ntBASIC-0.79□□□□□ -2.54
RFX7Q2KHR2 SNORA27.4-201ENST00000516650 95 ntBASIC-0.79□□□□□ -2.54
RFX7Q2KHR2 FO082796.1-201ENST00000523795 183 ntBASIC-0.79□□□□□ -2.54
RFX7Q2KHR2 DISC2.1-201ENST00000612827 205 ntBASIC-0.79□□□□□ -2.54
RFX7Q2KHR2 MIR6128-201ENST00000615528 109 ntBASIC-0.79□□□□□ -2.54
RFX7Q2KHR2 MIR6738-201ENST00000619620 64 ntBASIC-0.79□□□□□ -2.54
RFX7Q2KHR2 AL596211.1-201ENST00000569873 2277 ntBASIC-0.79□□□□□ -2.54
RFX7Q2KHR2 Y_RNA.7-201ENST00000362352 102 ntBASIC-0.8□□□□□ -2.54
RFX7Q2KHR2 Y_RNA.146-201ENST00000363549 102 ntBASIC-0.8□□□□□ -2.54
RFX7Q2KHR2 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.8□□□□□ -2.54
RFX7Q2KHR2 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.8□□□□□ -2.54
RFX7Q2KHR2 MIR548I3-201ENST00000408378 149 ntBASIC-0.8□□□□□ -2.54
RFX7Q2KHR2 RNA5SP66-201ENST00000517178 101 ntBASIC-0.8□□□□□ -2.54
RFX7Q2KHR2 MIR4324-201ENST00000584846 72 ntBASIC-0.8□□□□□ -2.54
RFX7Q2KHR2 AC018462.2-201ENST00000605375 395 ntBASIC-0.8□□□□□ -2.54
RFX7Q2KHR2 AC087752.4-201ENST00000605911 462 ntBASIC-0.8□□□□□ -2.54
RFX7Q2KHR2 AC005014.2-201ENST00000607795 599 ntBASIC-0.8□□□□□ -2.54
RFX7Q2KHR2 uc_338.19-201ENST00000616808 99 ntBASIC-0.8□□□□□ -2.54
RFX7Q2KHR2 AL603755.1-201ENST00000619504 163 ntBASIC-0.8□□□□□ -2.54
RFX7Q2KHR2 RNU6-626P-201ENST00000363354 107 ntBASIC-0.81□□□□□ -2.54
RFX7Q2KHR2 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.81□□□□□ -2.54
RFX7Q2KHR2 U8.6-201ENST00000364939 135 ntBASIC-0.81□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 228.8 ms