Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 Y_RNA.154-201ENST00000363624 102 ntBASIC0.34□□□□□ -2.35
MSH6P52701 RNU6-923P-201ENST00000364753 107 ntBASIC0.34□□□□□ -2.35
MSH6P52701 RNY3P1-201ENST00000365085 102 ntBASIC0.34□□□□□ -2.35
MSH6P52701 RNU6-763P-201ENST00000390865 106 ntBASIC0.34□□□□□ -2.35
MSH6P52701 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.34□□□□□ -2.35
MSH6P52701 SNORD83.1-201ENST00000411362 77 ntBASIC0.34□□□□□ -2.35
MSH6P52701 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.34□□□□□ -2.35
MSH6P52701 AC090844.1-201ENST00000422019 156 ntBASIC0.34□□□□□ -2.35
MSH6P52701 AC023449.1-201ENST00000454464 154 ntBASIC0.34□□□□□ -2.35
MSH6P52701 RNU6-1046P-201ENST00000516538 107 ntBASIC0.34□□□□□ -2.35
MSH6P52701 RNU7-25P-201ENST00000516544 62 ntBASIC0.34□□□□□ -2.35
MSH6P52701 RNU7-149P-201ENST00000516739 59 ntBASIC0.34□□□□□ -2.35
MSH6P52701 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.34□□□□□ -2.35
MSH6P52701 MIR4802-201ENST00000581881 80 ntBASIC0.34□□□□□ -2.35
MSH6P52701 SNORD113-8-201ENST00000363497 74 ntBASIC0.33□□□□□ -2.36
MSH6P52701 MIR520F-201ENST00000384824 87 ntBASIC0.33□□□□□ -2.36
MSH6P52701 MIR520H-201ENST00000385126 88 ntBASIC0.33□□□□□ -2.36
MSH6P52701 MIR140-201ENST00000385282 100 ntBASIC0.33□□□□□ -2.36
MSH6P52701 Y_RNA.579-201ENST00000390939 94 ntBASIC0.33□□□□□ -2.36
MSH6P52701 RNU6-308P-201ENST00000390957 107 ntBASIC0.33□□□□□ -2.36
MSH6P52701 RNU6-1009P-201ENST00000390996 107 ntBASIC0.33□□□□□ -2.36
MSH6P52701 RNA5SP496-201ENST00000391240 109 ntBASIC0.33□□□□□ -2.36
MSH6P52701 RNU7-56P-201ENST00000458744 62 ntBASIC0.33□□□□□ -2.36
MSH6P52701 Y_RNA.637-201ENST00000459424 114 ntBASIC0.33□□□□□ -2.36
MSH6P52701 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
MSH6P52701 MIR4804-201ENST00000581683 73 ntBASIC0.33□□□□□ -2.36
MSH6P52701 C8orf59P2-201ENST00000603441 271 ntBASIC0.33□□□□□ -2.36
MSH6P52701 AL355297.3-201ENST00000604082 446 ntBASIC0.33□□□□□ -2.36
MSH6P52701 AL021707.8-201ENST00000609428 183 ntBASIC0.33□□□□□ -2.36
MSH6P52701 MIR8055-201ENST00000610739 97 ntBASIC0.33□□□□□ -2.36
MSH6P52701 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.32□□□□□ -2.36
MSH6P52701 MIR18A-201ENST00000362310 71 ntBASIC0.32□□□□□ -2.36
MSH6P52701 RNU6-1205P-201ENST00000363625 106 ntBASIC0.32□□□□□ -2.36
MSH6P52701 RNY4P3-201ENST00000365254 95 ntBASIC0.32□□□□□ -2.36
MSH6P52701 RNU6-1138P-201ENST00000365359 106 ntBASIC0.32□□□□□ -2.36
MSH6P52701 Y_RNA.356-201ENST00000365475 113 ntBASIC0.32□□□□□ -2.36
MSH6P52701 SNORD115-46-201ENST00000390982 71 ntBASIC0.32□□□□□ -2.36
MSH6P52701 MIR548O-201ENST00000408583 114 ntBASIC0.32□□□□□ -2.36
MSH6P52701 HSPE1P25-201ENST00000455484 251 ntBASIC0.32□□□□□ -2.36
MSH6P52701 AC020891.4-201ENST00000605745 93 ntBASIC0.32□□□□□ -2.36
MSH6P52701 AC007485.1-201ENST00000616755 206 ntBASIC0.32□□□□□ -2.36
MSH6P52701 uc_338.22-201ENST00000622722 187 ntBASIC0.32□□□□□ -2.36
MSH6P52701 AC112487.2-201ENST00000637950 304 ntBASIC0.32□□□□□ -2.36
MSH6P52701 SNORD115-34-201ENST00000362441 82 ntBASIC0.32□□□□□ -2.36
MSH6P52701 SNORD115-12-201ENST00000362583 82 ntBASIC0.32□□□□□ -2.36
MSH6P52701 SNORD115-29-201ENST00000362834 82 ntBASIC0.32□□□□□ -2.36
MSH6P52701 SNORD115-9-201ENST00000362912 82 ntBASIC0.32□□□□□ -2.36
MSH6P52701 SNORD115-21-201ENST00000362963 81 ntBASIC0.32□□□□□ -2.36
MSH6P52701 SNORD115-14-201ENST00000363090 81 ntBASIC0.32□□□□□ -2.36
MSH6P52701 SNORD115-13-201ENST00000363358 82 ntBASIC0.32□□□□□ -2.36
MSH6P52701 SNORD115-41-201ENST00000363608 82 ntBASIC0.32□□□□□ -2.36
MSH6P52701 SNORD115-11-201ENST00000363616 82 ntBASIC0.32□□□□□ -2.36
MSH6P52701 SNORD115-5-201ENST00000363633 82 ntBASIC0.32□□□□□ -2.36
MSH6P52701 SNORD115-39-201ENST00000363694 82 ntBASIC0.32□□□□□ -2.36
MSH6P52701 SNORD115-4-201ENST00000363810 82 ntBASIC0.32□□□□□ -2.36
MSH6P52701 SNORD115-16-201ENST00000363887 82 ntBASIC0.32□□□□□ -2.36
MSH6P52701 SNORD115-6-201ENST00000363942 82 ntBASIC0.32□□□□□ -2.36
MSH6P52701 SNORD115-42-201ENST00000364273 82 ntBASIC0.32□□□□□ -2.36
MSH6P52701 SNORD115-15-201ENST00000364809 81 ntBASIC0.32□□□□□ -2.36
MSH6P52701 SNORD115-1-201ENST00000364961 82 ntBASIC0.32□□□□□ -2.36
MSH6P52701 SNORD115-26-201ENST00000365067 82 ntBASIC0.32□□□□□ -2.36
MSH6P52701 SNORD115-10-201ENST00000365073 81 ntBASIC0.32□□□□□ -2.36
MSH6P52701 SNORD115-43-201ENST00000365503 82 ntBASIC0.32□□□□□ -2.36
MSH6P52701 SNORD115-36-201ENST00000365629 82 ntBASIC0.32□□□□□ -2.36
MSH6P52701 RNU6-383P-201ENST00000410864 94 ntBASIC0.32□□□□□ -2.36
MSH6P52701 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC0.32□□□□□ -2.36
MSH6P52701 RNU7-67P-201ENST00000459003 62 ntBASIC0.32□□□□□ -2.36
MSH6P52701 RNU6-507P-201ENST00000516045 100 ntBASIC0.32□□□□□ -2.36
MSH6P52701 Y_RNA.666-201ENST00000516187 112 ntBASIC0.32□□□□□ -2.36
MSH6P52701 AC007751.1-201ENST00000529260 376 ntBASIC0.32□□□□□ -2.36
MSH6P52701 MIR4771-2-201ENST00000577758 74 ntBASIC0.32□□□□□ -2.36
MSH6P52701 MIR4771-1-201ENST00000582617 74 ntBASIC0.32□□□□□ -2.36
MSH6P52701 MIR4676-201ENST00000583078 72 ntBASIC0.32□□□□□ -2.36
MSH6P52701 SNORD115-40-201ENST00000606510 82 ntBASIC0.32□□□□□ -2.36
MSH6P52701 AC013791.1-201ENST00000616619 62 ntBASIC0.32□□□□□ -2.36
MSH6P52701 Y_RNA.183-201ENST00000363882 113 ntBASIC0.31□□□□□ -2.36
MSH6P52701 RNU4-45P-201ENST00000365469 141 ntBASIC0.31□□□□□ -2.36
MSH6P52701 Y_RNA.395-201ENST00000383945 109 ntBASIC0.31□□□□□ -2.36
MSH6P52701 Y_RNA.424-201ENST00000384063 103 ntBASIC0.31□□□□□ -2.36
MSH6P52701 Y_RNA.445-201ENST00000384168 102 ntBASIC0.31□□□□□ -2.36
MSH6P52701 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.31□□□□□ -2.36
MSH6P52701 AC087499.4-201ENST00000448505 178 ntBASIC0.31□□□□□ -2.36
MSH6P52701 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.31□□□□□ -2.36
MSH6P52701 RNU7-73P-201ENST00000458743 63 ntBASIC0.31□□□□□ -2.36
MSH6P52701 AC091959.1-201ENST00000495857 238 ntBASIC0.31□□□□□ -2.36
MSH6P52701 AC082651.2-201ENST00000496833 166 ntBASIC0.31□□□□□ -2.36
MSH6P52701 MRPS35P2-201ENST00000508242 191 ntBASIC0.31□□□□□ -2.36
MSH6P52701 SNORA68.3-201ENST00000515906 83 ntBASIC0.31□□□□□ -2.36
MSH6P52701 RNU6-958P-201ENST00000516995 106 ntBASIC0.31□□□□□ -2.36
MSH6P52701 MIR3612-201ENST00000579753 87 ntBASIC0.31□□□□□ -2.36
MSH6P52701 RNA5SP98-201ENST00000363158 137 ntBASIC0.3□□□□□ -2.36
MSH6P52701 Y_RNA.241-201ENST00000364470 117 ntBASIC0.3□□□□□ -2.36
MSH6P52701 SNORA63.7-201ENST00000365579 123 ntBASIC0.3□□□□□ -2.36
MSH6P52701 RNU6-102P-201ENST00000384485 104 ntBASIC0.3□□□□□ -2.36
MSH6P52701 SNORD38B-201ENST00000384690 67 ntBASIC0.3□□□□□ -2.36
MSH6P52701 Y_RNA.569-201ENST00000384749 103 ntBASIC0.3□□□□□ -2.36
MSH6P52701 SNORA40.5-201ENST00000391061 128 ntBASIC0.3□□□□□ -2.36
MSH6P52701 AC015818.7-201ENST00000428754 109 ntBASIC0.3□□□□□ -2.36
MSH6P52701 MTCO1P5-201ENST00000433573 344 ntBASIC0.3□□□□□ -2.36
MSH6P52701 AC087499.7-201ENST00000441958 109 ntBASIC0.3□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 1192.3 ms