Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 RNU6-998P-201ENST00000515894 101 ntBASIC-1.17□□□□□ -2.6
GTF2A1P52655 Y_RNA.665-201ENST00000516177 98 ntBASIC-1.17□□□□□ -2.6
GTF2A1P52655 RNU6-759P-201ENST00000516740 103 ntBASIC-1.17□□□□□ -2.6
GTF2A1P52655 RNU7-188P-201ENST00000517063 64 ntBASIC-1.17□□□□□ -2.6
GTF2A1P52655 RNU6-232P-201ENST00000517144 64 ntBASIC-1.17□□□□□ -2.6
GTF2A1P52655 IGKV1-22-201ENST00000524313 326 ntBASIC-1.17□□□□□ -2.6
GTF2A1P52655 AL356055.1-201ENST00000602528 446 ntBASIC-1.17□□□□□ -2.6
GTF2A1P52655 RNU6-865P-201ENST00000364772 107 ntBASIC-1.18□□□□□ -2.6
GTF2A1P52655 Y_RNA.329-201ENST00000365209 107 ntBASIC-1.18□□□□□ -2.6
GTF2A1P52655 RNU6-842P-201ENST00000384269 107 ntBASIC-1.18□□□□□ -2.6
GTF2A1P52655 RNU6-35P-201ENST00000384530 107 ntBASIC-1.18□□□□□ -2.6
GTF2A1P52655 AL590004.1-201ENST00000405321 300 ntBASIC-1.18□□□□□ -2.6
GTF2A1P52655 AF228730.4-201ENST00000421457 183 ntBASIC-1.18□□□□□ -2.6
GTF2A1P52655 MTND1P27-201ENST00000451117 902 ntBASIC-1.18□□□□□ -2.6
GTF2A1P52655 RNU7-125P-201ENST00000458760 62 ntBASIC-1.18□□□□□ -2.6
GTF2A1P52655 AC021146.6-201ENST00000514659 117 ntBASIC-1.18□□□□□ -2.6
GTF2A1P52655 SNORA27.4-201ENST00000516650 95 ntBASIC-1.18□□□□□ -2.6
GTF2A1P52655 SNORD36C-201ENST00000516733 66 ntBASIC-1.18□□□□□ -2.6
GTF2A1P52655 RNU6-256P-201ENST00000516747 97 ntBASIC-1.18□□□□□ -2.6
GTF2A1P52655 RNU6-835P-201ENST00000516974 104 ntBASIC-1.18□□□□□ -2.6
GTF2A1P52655 OSBPL9P5-201ENST00000542581 171 ntBASIC-1.18□□□□□ -2.6
GTF2A1P52655 MIR3672-201ENST00000584290 82 ntBASIC-1.18□□□□□ -2.6
GTF2A1P52655 RNU6-509P-201ENST00000363519 107 ntBASIC-1.19□□□□□ -2.6
GTF2A1P52655 RNU6-1244P-201ENST00000363614 108 ntBASIC-1.19□□□□□ -2.6
GTF2A1P52655 RNU6-1203P-201ENST00000410703 110 ntBASIC-1.19□□□□□ -2.6
GTF2A1P52655 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-1.19□□□□□ -2.6
GTF2A1P52655 RNU6-531P-201ENST00000516694 104 ntBASIC-1.19□□□□□ -2.6
GTF2A1P52655 MIR4423-201ENST00000580922 80 ntBASIC-1.19□□□□□ -2.6
GTF2A1P52655 AC073648.5-201ENST00000603502 305 ntBASIC-1.19□□□□□ -2.6
GTF2A1P52655 AC005014.2-201ENST00000607795 599 ntBASIC-1.19□□□□□ -2.6
GTF2A1P52655 AC027449.1-201ENST00000608890 407 ntBASIC-1.19□□□□□ -2.6
GTF2A1P52655 Y_RNA.169-201ENST00000363745 96 ntBASIC-1.2□□□□□ -2.6
GTF2A1P52655 SNORD116-9-201ENST00000384000 95 ntBASIC-1.2□□□□□ -2.6
GTF2A1P52655 SNORD116-3-201ENST00000384287 95 ntBASIC-1.2□□□□□ -2.6
GTF2A1P52655 SNORD116-8-201ENST00000384365 95 ntBASIC-1.2□□□□□ -2.6
GTF2A1P52655 SNORD116-7-201ENST00000384404 95 ntBASIC-1.2□□□□□ -2.6
GTF2A1P52655 SNORD116-5-201ENST00000384462 95 ntBASIC-1.2□□□□□ -2.6
GTF2A1P52655 RNU6-1133P-201ENST00000410963 100 ntBASIC-1.2□□□□□ -2.6
GTF2A1P52655 Y_RNA.637-201ENST00000459424 114 ntBASIC-1.2□□□□□ -2.6
GTF2A1P52655 SCARNA17-201ENST00000516183 144 ntBASIC-1.2□□□□□ -2.6
GTF2A1P52655 AC022140.2-201ENST00000623500 188 ntBASIC-1.2□□□□□ -2.6
GTF2A1P52655 Y_RNA.7-201ENST00000362352 102 ntBASIC-1.21□□□□□ -2.6
GTF2A1P52655 RNU6-1336P-201ENST00000383886 109 ntBASIC-1.21□□□□□ -2.6
GTF2A1P52655 MIR620-201ENST00000385232 95 ntBASIC-1.21□□□□□ -2.6
GTF2A1P52655 MT-TH-201ENST00000387441 69 ntBASIC-1.21□□□□□ -2.6
GTF2A1P52655 Y_RNA.587-201ENST00000391210 103 ntBASIC-1.21□□□□□ -2.6
GTF2A1P52655 RNU6-881P-201ENST00000516813 102 ntBASIC-1.21□□□□□ -2.6
GTF2A1P52655 MTATP6P24-201ENST00000576835 677 ntBASIC-1.21□□□□□ -2.6
GTF2A1P52655 MIR3915-201ENST00000578518 97 ntBASIC-1.21□□□□□ -2.6
GTF2A1P52655 AC040904.1-201ENST00000590850 223 ntBASIC-1.21□□□□□ -2.6
GTF2A1P52655 AL080274.1-201ENST00000605565 220 ntBASIC-1.21□□□□□ -2.6
GTF2A1P52655 AC122108.2-201ENST00000611946 526 ntBASIC-1.21□□□□□ -2.6
GTF2A1P52655 Y_RNA.72-201ENST00000362894 103 ntBASIC-1.22□□□□□ -2.6
GTF2A1P52655 RNU4-58P-201ENST00000363192 141 ntBASIC-1.22□□□□□ -2.6
GTF2A1P52655 Y_RNA.373-201ENST00000365600 103 ntBASIC-1.22□□□□□ -2.6
GTF2A1P52655 SNORD116-11-201ENST00000383882 92 ntBASIC-1.22□□□□□ -2.6
GTF2A1P52655 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.22□□□□□ -2.6
GTF2A1P52655 MIR9-2-201ENST00000384838 87 ntBASIC-1.22□□□□□ -2.6
GTF2A1P52655 MIR204-201ENST00000385200 110 ntBASIC-1.22□□□□□ -2.6
GTF2A1P52655 SNORA26.8-201ENST00000391306 124 ntBASIC-1.22□□□□□ -2.6
GTF2A1P52655 FCF1P4-201ENST00000448326 183 ntBASIC-1.22□□□□□ -2.6
GTF2A1P52655 AC098826.2-201ENST00000452011 651 ntBASIC-1.22□□□□□ -2.6
GTF2A1P52655 RNU7-45P-201ENST00000459460 63 ntBASIC-1.22□□□□□ -2.6
GTF2A1P52655 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC-1.22□□□□□ -2.6
GTF2A1P52655 RNU6-470P-201ENST00000515954 104 ntBASIC-1.22□□□□□ -2.6
GTF2A1P52655 RNU2-31P-201ENST00000516954 155 ntBASIC-1.22□□□□□ -2.6
GTF2A1P52655 AC024933.1-201ENST00000608472 348 ntBASIC-1.22□□□□□ -2.6
GTF2A1P52655 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-1.22□□□□□ -2.6
GTF2A1P52655 Y_RNA.56-201ENST00000362798 112 ntBASIC-1.23□□□□□ -2.61
GTF2A1P52655 SNORA36B-201ENST00000410438 131 ntBASIC-1.23□□□□□ -2.61
GTF2A1P52655 Y_RNA.648-201ENST00000459455 110 ntBASIC-1.23□□□□□ -2.61
GTF2A1P52655 SNORD11.1-201ENST00000459482 85 ntBASIC-1.23□□□□□ -2.61
GTF2A1P52655 AC091951.2-201ENST00000500762 203 ntBASIC-1.23□□□□□ -2.61
GTF2A1P52655 DEFB131E-201ENST00000532329 154 ntBASIC-1.23□□□□□ -2.61
GTF2A1P52655 MTRNR2L2-201ENST00000604882 87 ntBASIC-1.23□□□□□ -2.61
GTF2A1P52655 RNU4-36P-201ENST00000364294 144 ntBASIC-1.24□□□□□ -2.61
GTF2A1P52655 SNORD114-15-201ENST00000364687 72 ntBASIC-1.24□□□□□ -2.61
GTF2A1P52655 Y_RNA.436-201ENST00000384097 102 ntBASIC-1.24□□□□□ -2.61
GTF2A1P52655 RNU6-20P-201ENST00000384106 107 ntBASIC-1.24□□□□□ -2.61
GTF2A1P52655 MIR635-201ENST00000384830 98 ntBASIC-1.24□□□□□ -2.61
GTF2A1P52655 MIR548A2-201ENST00000384956 97 ntBASIC-1.24□□□□□ -2.61
GTF2A1P52655 RNA5SP261-201ENST00000410536 106 ntBASIC-1.24□□□□□ -2.61
GTF2A1P52655 Y_RNA.615-201ENST00000410769 117 ntBASIC-1.24□□□□□ -2.61
GTF2A1P52655 AL445193.1-201ENST00000441183 141 ntBASIC-1.24□□□□□ -2.61
GTF2A1P52655 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC-1.24□□□□□ -2.61
GTF2A1P52655 RNU7-149P-201ENST00000516739 59 ntBASIC-1.24□□□□□ -2.61
GTF2A1P52655 SCARNA1-201ENST00000517138 166 ntBASIC-1.24□□□□□ -2.61
GTF2A1P52655 AC022960.3-201ENST00000619794 441 ntBASIC-1.24□□□□□ -2.61
GTF2A1P52655 AC091931.1-201ENST00000623488 728 ntBASIC-1.24□□□□□ -2.61
GTF2A1P52655 RNY1P13-201ENST00000365030 105 ntBASIC-1.25□□□□□ -2.61
GTF2A1P52655 Y_RNA.430-201ENST00000384081 110 ntBASIC-1.25□□□□□ -2.61
GTF2A1P52655 Y_RNA.530-201ENST00000384587 101 ntBASIC-1.25□□□□□ -2.61
GTF2A1P52655 MIR626-201ENST00000385032 94 ntBASIC-1.25□□□□□ -2.61
GTF2A1P52655 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-1.25□□□□□ -2.61
GTF2A1P52655 MTATP6P23-201ENST00000440153 476 ntBASIC-1.25□□□□□ -2.61
GTF2A1P52655 RNU6-175P-201ENST00000516896 107 ntBASIC-1.25□□□□□ -2.61
GTF2A1P52655 MIR4528-201ENST00000577763 90 ntBASIC-1.25□□□□□ -2.61
GTF2A1P52655 AC022441.3-201ENST00000605737 136 ntBASIC-1.25□□□□□ -2.61
GTF2A1P52655 AC087752.4-201ENST00000605911 462 ntBASIC-1.25□□□□□ -2.61
GTF2A1P52655 RNU6-1138P-201ENST00000365359 106 ntBASIC-1.26□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 213.4 ms