Protein–RNA interactions for Protein: P08247

SYP, Synaptophysin, humanhuman

Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYPP08247 MIR342-201ENST00000362212 99 ntBASIC2.38□□□□□ -2.03
SYPP08247 SNORD114-1-201ENST00000362705 72 ntBASIC2.38□□□□□ -2.03
SYPP08247 Y_RNA.49-201ENST00000362714 112 ntBASIC2.38□□□□□ -2.03
SYPP08247 RNU6-112P-201ENST00000363599 104 ntBASIC2.38□□□□□ -2.03
SYPP08247 RNU6-414P-201ENST00000363705 104 ntBASIC2.38□□□□□ -2.03
SYPP08247 DEFA7P-201ENST00000382676 285 ntBASIC2.38□□□□□ -2.03
SYPP08247 RNU6-296P-201ENST00000384608 107 ntBASIC2.38□□□□□ -2.03
SYPP08247 RNU6-1104P-201ENST00000384723 104 ntBASIC2.38□□□□□ -2.03
SYPP08247 MIR759-201ENST00000390224 91 ntBASIC2.38□□□□□ -2.03
SYPP08247 MIR1289-2-201ENST00000408360 111 ntBASIC2.38□□□□□ -2.03
SYPP08247 RNA5SP501-201ENST00000410990 112 ntBASIC2.38□□□□□ -2.03
SYPP08247 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.38□□□□□ -2.03
SYPP08247 RNU7-96P-201ENST00000459535 64 ntBASIC2.38□□□□□ -2.03
SYPP08247 RPL23AP63-201ENST00000498752 471 ntBASIC2.38□□□□□ -2.03
SYPP08247 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.38□□□□□ -2.03
SYPP08247 RNU2-35P-201ENST00000516446 142 ntBASIC2.38□□□□□ -2.03
SYPP08247 RNU7-181P-201ENST00000517234 74 ntBASIC2.38□□□□□ -2.03
SYPP08247 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC2.38□□□□□ -2.03
SYPP08247 AC103810.6-201ENST00000606708 136 ntBASIC2.38□□□□□ -2.03
SYPP08247 MIR1291-201ENST00000627649 87 ntBASIC2.38□□□□□ -2.03
SYPP08247 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
SYPP08247 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.37□□□□□ -2.03
SYPP08247 RNU6-766P-201ENST00000362478 107 ntBASIC2.37□□□□□ -2.03
SYPP08247 RNU4-16P-201ENST00000364737 141 ntBASIC2.37□□□□□ -2.03
SYPP08247 Y_RNA.328-201ENST00000365208 113 ntBASIC2.37□□□□□ -2.03
SYPP08247 AL035398.1-201ENST00000430869 322 ntBASIC2.37□□□□□ -2.03
SYPP08247 RPL39P34-201ENST00000477141 156 ntBASIC2.37□□□□□ -2.03
SYPP08247 IGLV3-17-201ENST00000519099 244 ntBASIC2.37□□□□□ -2.03
SYPP08247 AC022523.2-201ENST00000561045 150 ntBASIC2.37□□□□□ -2.03
SYPP08247 AC106754.2-201ENST00000623006 233 ntBASIC2.37□□□□□ -2.03
SYPP08247 AC010297.1-201ENST00000623948 149 ntBASIC2.37□□□□□ -2.03
SYPP08247 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
SYPP08247 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
SYPP08247 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
SYPP08247 RNA5SP393-201ENST00000363423 117 ntBASIC2.36□□□□□ -2.03
SYPP08247 RNU6-756P-201ENST00000383997 107 ntBASIC2.36□□□□□ -2.03
SYPP08247 MIR452-201ENST00000385020 85 ntBASIC2.36□□□□□ -2.03
SYPP08247 MIR1302-5-201ENST00000408164 150 ntBASIC2.36□□□□□ -2.03
SYPP08247 MIR1267-201ENST00000408723 78 ntBASIC2.36□□□□□ -2.03
SYPP08247 RNA5SP181-201ENST00000410246 98 ntBASIC2.36□□□□□ -2.03
SYPP08247 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC2.36□□□□□ -2.03
SYPP08247 Y_RNA.677-201ENST00000516401 85 ntBASIC2.36□□□□□ -2.03
SYPP08247 AC046143.2-201ENST00000609789 160 ntBASIC2.36□□□□□ -2.03
SYPP08247 AL137847.3-201ENST00000611521 109 ntBASIC2.36□□□□□ -2.03
SYPP08247 AC021506.2-201ENST00000612354 169 ntBASIC2.36□□□□□ -2.03
SYPP08247 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
SYPP08247 AC016717.2-201ENST00000609089 5141 ntBASIC2.35□□□□□ -2.03
SYPP08247 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
SYPP08247 Y_RNA.344-201ENST00000365381 112 ntBASIC2.35□□□□□ -2.03
SYPP08247 MIR516B2-201ENST00000385190 85 ntBASIC2.35□□□□□ -2.03
SYPP08247 RNA5SP210-201ENST00000391034 120 ntBASIC2.35□□□□□ -2.03
SYPP08247 RNU2-7P-201ENST00000410794 178 ntBASIC2.35□□□□□ -2.03
SYPP08247 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.35□□□□□ -2.03
SYPP08247 AC026436.1-201ENST00000510537 270 ntBASIC2.35□□□□□ -2.03
SYPP08247 RNU6-537P-201ENST00000517277 103 ntBASIC2.35□□□□□ -2.03
SYPP08247 MIR5194-201ENST00000582634 120 ntBASIC2.35□□□□□ -2.03
SYPP08247 FO624990.1-201ENST00000636373 85 ntBASIC2.35□□□□□ -2.03
SYPP08247 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
SYPP08247 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.34□□□□□ -2.03
SYPP08247 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.34□□□□□ -2.03
SYPP08247 SNORA51.5-201ENST00000384126 131 ntBASIC2.34□□□□□ -2.03
SYPP08247 MIR548D2-201ENST00000384955 97 ntBASIC2.34□□□□□ -2.03
SYPP08247 RNA5SP144-201ENST00000410846 116 ntBASIC2.34□□□□□ -2.03
SYPP08247 AC093850.1-201ENST00000454121 251 ntBASIC2.34□□□□□ -2.03
SYPP08247 RNU7-34P-201ENST00000459394 64 ntBASIC2.34□□□□□ -2.03
SYPP08247 AC099513.1-201ENST00000490423 301 ntBASIC2.34□□□□□ -2.03
SYPP08247 RNA5SP481-201ENST00000516814 122 ntBASIC2.34□□□□□ -2.03
SYPP08247 MIR4709-201ENST00000577272 72 ntBASIC2.34□□□□□ -2.03
SYPP08247 MIR4446-201ENST00000578505 67 ntBASIC2.34□□□□□ -2.03
SYPP08247 MIR3163-201ENST00000581592 73 ntBASIC2.34□□□□□ -2.03
SYPP08247 SNORD14A-201ENST00000606526 91 ntBASIC2.34□□□□□ -2.03
SYPP08247 AL513423.1-201ENST00000621695 132 ntBASIC2.34□□□□□ -2.03
SYPP08247 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
SYPP08247 MIR302B-201ENST00000362188 73 ntBASIC2.33□□□□□ -2.04
SYPP08247 U8.6-201ENST00000364939 135 ntBASIC2.33□□□□□ -2.04
SYPP08247 RNA5SP270-201ENST00000411361 118 ntBASIC2.33□□□□□ -2.04
SYPP08247 snoU13.27-201ENST00000459278 104 ntBASIC2.33□□□□□ -2.04
SYPP08247 RPL23AP42-201ENST00000471152 471 ntBASIC2.33□□□□□ -2.04
SYPP08247 AC068339.1-201ENST00000526965 141 ntBASIC2.33□□□□□ -2.04
SYPP08247 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.33□□□□□ -2.04
SYPP08247 AC021613.1-201ENST00000623880 111 ntBASIC2.33□□□□□ -2.04
SYPP08247 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.33□□□□□ -2.04
SYPP08247 MIR4679-1-201ENST00000637619 75 ntBASIC2.33□□□□□ -2.04
SYPP08247 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
SYPP08247 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.33□□□□□ -2.04
SYPP08247 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
SYPP08247 MIR6073-201ENST00000352083 89 ntBASIC2.32□□□□□ -2.04
SYPP08247 SNORA1.2-201ENST00000365189 134 ntBASIC2.32□□□□□ -2.04
SYPP08247 Y_RNA.348-201ENST00000365403 103 ntBASIC2.32□□□□□ -2.04
SYPP08247 MIR136-201ENST00000385207 82 ntBASIC2.32□□□□□ -2.04
SYPP08247 MIR660-201ENST00000385235 97 ntBASIC2.32□□□□□ -2.04
SYPP08247 MIR764-201ENST00000390811 85 ntBASIC2.32□□□□□ -2.04
SYPP08247 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.32□□□□□ -2.04
SYPP08247 RNU2-11P-201ENST00000459191 187 ntBASIC2.32□□□□□ -2.04
SYPP08247 SNORA31.15-201ENST00000516771 132 ntBASIC2.32□□□□□ -2.04
SYPP08247 RNU6-548P-201ENST00000517083 115 ntBASIC2.32□□□□□ -2.04
SYPP08247 MIR5009-201ENST00000578736 100 ntBASIC2.32□□□□□ -2.04
SYPP08247 MIR5582-201ENST00000579697 68 ntBASIC2.32□□□□□ -2.04
SYPP08247 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.32□□□□□ -2.04
SYPP08247 AC092881.1-201ENST00000638218 2733 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 210.9 ms