Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 Y_RNA.788-201ENST00000622394 112 ntBASIC1.79□□□□□ -2.12
KRTAP3-1Q9BYR8 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
KRTAP3-1Q9BYR8 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC1.78□□□□□ -2.12
KRTAP3-1Q9BYR8 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC1.78□□□□□ -2.12
KRTAP3-1Q9BYR8 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP3-1Q9BYR8 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC1.78□□□□□ -2.12
KRTAP3-1Q9BYR8 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC1.78□□□□□ -2.12
KRTAP3-1Q9BYR8 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP3-1Q9BYR8 SNORA63.2-201ENST00000362603 126 ntBASIC1.78□□□□□ -2.12
KRTAP3-1Q9BYR8 RNU6-811P-201ENST00000384069 107 ntBASIC1.78□□□□□ -2.12
KRTAP3-1Q9BYR8 HMGN2P39-201ENST00000398005 273 ntBASIC1.78□□□□□ -2.12
KRTAP3-1Q9BYR8 AC019129.1-201ENST00000403786 261 ntBASIC1.78□□□□□ -2.12
KRTAP3-1Q9BYR8 RNA5SP293-201ENST00000410527 113 ntBASIC1.78□□□□□ -2.12
KRTAP3-1Q9BYR8 RNU4-83P-201ENST00000410863 133 ntBASIC1.78□□□□□ -2.12
KRTAP3-1Q9BYR8 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC1.78□□□□□ -2.12
KRTAP3-1Q9BYR8 AC105272.1-201ENST00000438604 198 ntBASIC1.78□□□□□ -2.12
KRTAP3-1Q9BYR8 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC1.78□□□□□ -2.12
KRTAP3-1Q9BYR8 CYCSP30-201ENST00000546447 172 ntBASIC1.78□□□□□ -2.12
KRTAP3-1Q9BYR8 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC1.78□□□□□ -2.12
KRTAP3-1Q9BYR8 MIR3186-201ENST00000577404 85 ntBASIC1.78□□□□□ -2.12
KRTAP3-1Q9BYR8 AC087499.8-201ENST00000578406 226 ntBASIC1.78□□□□□ -2.12
KRTAP3-1Q9BYR8 MIR4500-201ENST00000579472 76 ntBASIC1.78□□□□□ -2.12
KRTAP3-1Q9BYR8 AL357312.1-201ENST00000603879 298 ntBASIC1.78□□□□□ -2.12
KRTAP3-1Q9BYR8 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP3-1Q9BYR8 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP3-1Q9BYR8 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP3-1Q9BYR8 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC1.77□□□□□ -2.13
KRTAP3-1Q9BYR8 RNU1-13P-201ENST00000384499 162 ntBASIC1.77□□□□□ -2.13
KRTAP3-1Q9BYR8 AC093578.1-201ENST00000415219 368 ntBASIC1.77□□□□□ -2.13
KRTAP3-1Q9BYR8 AL159169.1-201ENST00000421119 127 ntBASIC1.77□□□□□ -2.13
KRTAP3-1Q9BYR8 RNU7-170P-201ENST00000459303 61 ntBASIC1.77□□□□□ -2.13
KRTAP3-1Q9BYR8 RNU6-523P-201ENST00000516304 54 ntBASIC1.77□□□□□ -2.13
KRTAP3-1Q9BYR8 SNORA70.18-201ENST00000516696 98 ntBASIC1.77□□□□□ -2.13
KRTAP3-1Q9BYR8 RNU6-807P-201ENST00000516805 107 ntBASIC1.77□□□□□ -2.13
KRTAP3-1Q9BYR8 AC138749.4-201ENST00000563970 127 ntBASIC1.77□□□□□ -2.13
KRTAP3-1Q9BYR8 U6.109-201ENST00000636749 87 ntBASIC1.77□□□□□ -2.13
KRTAP3-1Q9BYR8 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
KRTAP3-1Q9BYR8 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
KRTAP3-1Q9BYR8 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
KRTAP3-1Q9BYR8 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC1.77□□□□□ -2.13
KRTAP3-1Q9BYR8 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
KRTAP3-1Q9BYR8 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC1.77□□□□□ -2.13
KRTAP3-1Q9BYR8 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP3-1Q9BYR8 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP3-1Q9BYR8 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP3-1Q9BYR8 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
KRTAP3-1Q9BYR8 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP3-1Q9BYR8 IDE-202ENST00000371581 4480 ntTSL 2 BASIC1.76□□□□□ -2.13
KRTAP3-1Q9BYR8 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC1.76□□□□□ -2.13
KRTAP3-1Q9BYR8 RNU6-161P-201ENST00000363051 106 ntBASIC1.76□□□□□ -2.13
KRTAP3-1Q9BYR8 RNA5SP283-201ENST00000365604 119 ntBASIC1.76□□□□□ -2.13
KRTAP3-1Q9BYR8 RNU6-805P-201ENST00000365643 106 ntBASIC1.76□□□□□ -2.13
KRTAP3-1Q9BYR8 SNORA70C-201ENST00000384538 135 ntBASIC1.76□□□□□ -2.13
KRTAP3-1Q9BYR8 AC009220.1-201ENST00000451614 275 ntBASIC1.76□□□□□ -2.13
KRTAP3-1Q9BYR8 HMGN1P18-201ENST00000457642 277 ntBASIC1.76□□□□□ -2.13
KRTAP3-1Q9BYR8 SCARNA18B-201ENST00000458806 135 ntBASIC1.76□□□□□ -2.13
KRTAP3-1Q9BYR8 RNU7-41P-201ENST00000515917 61 ntBASIC1.76□□□□□ -2.13
KRTAP3-1Q9BYR8 SNORD111.1-201ENST00000516421 86 ntBASIC1.76□□□□□ -2.13
KRTAP3-1Q9BYR8 RNU4ATAC3P-201ENST00000516699 126 ntBASIC1.76□□□□□ -2.13
KRTAP3-1Q9BYR8 DEFB122-202ENST00000569013 197 ntBASIC1.76□□□□□ -2.13
KRTAP3-1Q9BYR8 MIR3134-201ENST00000579433 74 ntBASIC1.76□□□□□ -2.13
KRTAP3-1Q9BYR8 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC1.76□□□□□ -2.13
KRTAP3-1Q9BYR8 MIR6716-201ENST00000613413 80 ntBASIC1.76□□□□□ -2.13
KRTAP3-1Q9BYR8 MIR7641-1-201ENST00000627518 61 ntBASIC1.76□□□□□ -2.13
KRTAP3-1Q9BYR8 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC1.76□□□□□ -2.13
KRTAP3-1Q9BYR8 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC1.76□□□□□ -2.13
KRTAP3-1Q9BYR8 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC1.76□□□□□ -2.13
KRTAP3-1Q9BYR8 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP3-1Q9BYR8 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC1.76□□□□□ -2.13
KRTAP3-1Q9BYR8 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
KRTAP3-1Q9BYR8 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP3-1Q9BYR8 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP3-1Q9BYR8 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC1.76□□□□□ -2.13
KRTAP3-1Q9BYR8 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC1.75□□□□□ -2.13
KRTAP3-1Q9BYR8 SPRR2C-201ENST00000290702 219 ntBASIC1.75□□□□□ -2.13
KRTAP3-1Q9BYR8 MIR148B-201ENST00000362252 99 ntBASIC1.75□□□□□ -2.13
KRTAP3-1Q9BYR8 SNORD56.3-201ENST00000363507 71 ntBASIC1.75□□□□□ -2.13
KRTAP3-1Q9BYR8 SNORA73.2-201ENST00000364946 201 ntBASIC1.75□□□□□ -2.13
KRTAP3-1Q9BYR8 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
KRTAP3-1Q9BYR8 SNORA48.8-201ENST00000391324 134 ntBASIC1.75□□□□□ -2.13
KRTAP3-1Q9BYR8 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC1.75□□□□□ -2.13
KRTAP3-1Q9BYR8 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC1.75□□□□□ -2.13
KRTAP3-1Q9BYR8 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC1.75□□□□□ -2.13
KRTAP3-1Q9BYR8 AC009474.2-201ENST00000451383 136 ntBASIC1.75□□□□□ -2.13
KRTAP3-1Q9BYR8 snoU13.2-201ENST00000459201 104 ntBASIC1.75□□□□□ -2.13
KRTAP3-1Q9BYR8 AC125388.1-201ENST00000459631 156 ntBASIC1.75□□□□□ -2.13
KRTAP3-1Q9BYR8 AC003982.1-202ENST00000469928 248 ntBASIC1.75□□□□□ -2.13
KRTAP3-1Q9BYR8 AC026402.1-201ENST00000513642 170 ntBASIC1.75□□□□□ -2.13
KRTAP3-1Q9BYR8 VTRNA2-2P-201ENST00000516091 103 ntBASIC1.75□□□□□ -2.13
KRTAP3-1Q9BYR8 RNU1-143P-201ENST00000516296 146 ntBASIC1.75□□□□□ -2.13
KRTAP3-1Q9BYR8 RNU6-1108P-201ENST00000516308 104 ntBASIC1.75□□□□□ -2.13
KRTAP3-1Q9BYR8 SNORA64.4-201ENST00000516632 81 ntBASIC1.75□□□□□ -2.13
KRTAP3-1Q9BYR8 SCARNA20.6-201ENST00000517251 106 ntBASIC1.75□□□□□ -2.13
KRTAP3-1Q9BYR8 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.75□□□□□ -2.13
KRTAP3-1Q9BYR8 MIR4284-201ENST00000578924 81 ntBASIC1.75□□□□□ -2.13
KRTAP3-1Q9BYR8 MIR4536-1-201ENST00000583537 88 ntBASIC1.75□□□□□ -2.13
KRTAP3-1Q9BYR8 SNORA4-201ENST00000584302 138 ntBASIC1.75□□□□□ -2.13
KRTAP3-1Q9BYR8 U1.23-201ENST00000610293 146 ntBASIC1.75□□□□□ -2.13
KRTAP3-1Q9BYR8 AL096861.1-201ENST00000610899 123 ntBASIC1.75□□□□□ -2.13
KRTAP3-1Q9BYR8 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 219.7 ms