Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
USB1Q9BQ65 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC3.16□□□□□ -1.9
USB1Q9BQ65 RNU1-70P-201ENST00000362618 164 ntBASIC3.16□□□□□ -1.9
USB1Q9BQ65 MIR519C-201ENST00000385053 87 ntBASIC3.16□□□□□ -1.9
USB1Q9BQ65 RNU2-7P-201ENST00000410794 178 ntBASIC3.16□□□□□ -1.9
USB1Q9BQ65 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.16□□□□□ -1.9
USB1Q9BQ65 AC093729.1-201ENST00000513074 128 ntBASIC3.16□□□□□ -1.9
USB1Q9BQ65 RNU7-79P-201ENST00000516082 62 ntBASIC3.16□□□□□ -1.9
USB1Q9BQ65 RNU2-27P-201ENST00000516185 142 ntBASIC3.16□□□□□ -1.9
USB1Q9BQ65 MIR4506-201ENST00000584693 77 ntBASIC3.16□□□□□ -1.9
USB1Q9BQ65 MIR8065-201ENST00000620577 100 ntBASIC3.16□□□□□ -1.9
USB1Q9BQ65 AL513423.1-201ENST00000621695 132 ntBASIC3.16□□□□□ -1.9
USB1Q9BQ65 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
USB1Q9BQ65 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
USB1Q9BQ65 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.15□□□□□ -1.91
USB1Q9BQ65 SNORD9-201ENST00000362566 104 ntBASIC3.15□□□□□ -1.91
USB1Q9BQ65 RNA5SP50-201ENST00000363731 107 ntBASIC3.15□□□□□ -1.91
USB1Q9BQ65 RNU1-91P-201ENST00000364746 163 ntBASIC3.15□□□□□ -1.91
USB1Q9BQ65 RNU6-613P-201ENST00000410412 108 ntBASIC3.15□□□□□ -1.91
USB1Q9BQ65 RPL23AP6-201ENST00000446637 472 ntBASIC3.15□□□□□ -1.91
USB1Q9BQ65 MIR3126-201ENST00000577443 74 ntBASIC3.15□□□□□ -1.91
USB1Q9BQ65 AC021506.2-201ENST00000612354 169 ntBASIC3.15□□□□□ -1.91
USB1Q9BQ65 AC105081.1-201ENST00000617727 106 ntBASIC3.15□□□□□ -1.91
USB1Q9BQ65 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
USB1Q9BQ65 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
USB1Q9BQ65 SNORA71.3-201ENST00000362582 128 ntBASIC3.14□□□□□ -1.91
USB1Q9BQ65 SNORD38.2-201ENST00000384470 69 ntBASIC3.14□□□□□ -1.91
USB1Q9BQ65 MIR627-201ENST00000384979 97 ntBASIC3.14□□□□□ -1.91
USB1Q9BQ65 MIR660-201ENST00000385235 97 ntBASIC3.14□□□□□ -1.91
USB1Q9BQ65 RNU6-1321P-201ENST00000390905 107 ntBASIC3.14□□□□□ -1.91
USB1Q9BQ65 AC104389.3-201ENST00000445629 235 ntBASIC3.14□□□□□ -1.91
USB1Q9BQ65 RN7SL293P-201ENST00000481765 281 ntBASIC3.14□□□□□ -1.91
USB1Q9BQ65 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC3.14□□□□□ -1.91
USB1Q9BQ65 AL513043.2-201ENST00000573941 143 ntBASIC3.14□□□□□ -1.91
USB1Q9BQ65 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC3.14□□□□□ -1.91
USB1Q9BQ65 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC3.14□□□□□ -1.91
USB1Q9BQ65 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.14□□□□□ -1.91
USB1Q9BQ65 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
USB1Q9BQ65 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.14□□□□□ -1.91
USB1Q9BQ65 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
USB1Q9BQ65 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
USB1Q9BQ65 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
USB1Q9BQ65 SNORA63.1-201ENST00000362493 131 ntBASIC3.13□□□□□ -1.91
USB1Q9BQ65 SNORD114-10-201ENST00000363409 72 ntBASIC3.13□□□□□ -1.91
USB1Q9BQ65 RNA5SP138-201ENST00000365098 114 ntBASIC3.13□□□□□ -1.91
USB1Q9BQ65 MIR520A-201ENST00000384862 85 ntBASIC3.13□□□□□ -1.91
USB1Q9BQ65 RNU6-447P-201ENST00000410293 104 ntBASIC3.13□□□□□ -1.91
USB1Q9BQ65 RNU6-1118P-201ENST00000410382 104 ntBASIC3.13□□□□□ -1.91
USB1Q9BQ65 RNU6-1076P-201ENST00000410397 104 ntBASIC3.13□□□□□ -1.91
USB1Q9BQ65 RNU6-355P-201ENST00000410427 104 ntBASIC3.13□□□□□ -1.91
USB1Q9BQ65 RNU6-791P-201ENST00000410467 104 ntBASIC3.13□□□□□ -1.91
USB1Q9BQ65 RNU6-705P-201ENST00000410601 104 ntBASIC3.13□□□□□ -1.91
USB1Q9BQ65 RNU6-1100P-201ENST00000410691 104 ntBASIC3.13□□□□□ -1.91
USB1Q9BQ65 RN7SKP123-201ENST00000410732 291 ntBASIC3.13□□□□□ -1.91
USB1Q9BQ65 RNU6-860P-201ENST00000410860 104 ntBASIC3.13□□□□□ -1.91
USB1Q9BQ65 RNU6-1217P-201ENST00000411276 104 ntBASIC3.13□□□□□ -1.91
USB1Q9BQ65 RNU6-785P-201ENST00000411324 104 ntBASIC3.13□□□□□ -1.91
USB1Q9BQ65 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.13□□□□□ -1.91
USB1Q9BQ65 MTND5P40-201ENST00000559945 246 ntBASIC3.13□□□□□ -1.91
USB1Q9BQ65 FAM106DP-201ENST00000586416 501 ntBASIC3.13□□□□□ -1.91
USB1Q9BQ65 U6.90-201ENST00000614007 104 ntBASIC3.13□□□□□ -1.91
USB1Q9BQ65 U6.70-201ENST00000620287 104 ntBASIC3.13□□□□□ -1.91
USB1Q9BQ65 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
USB1Q9BQ65 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
USB1Q9BQ65 MIR148B-201ENST00000362252 99 ntBASIC3.12□□□□□ -1.91
USB1Q9BQ65 SNORD115-37-201ENST00000363768 82 ntBASIC3.12□□□□□ -1.91
USB1Q9BQ65 Y_RNA.173-201ENST00000363776 113 ntBASIC3.12□□□□□ -1.91
USB1Q9BQ65 MIR183-201ENST00000384958 110 ntBASIC3.12□□□□□ -1.91
USB1Q9BQ65 RNVU1-2-201ENST00000516326 135 ntBASIC3.12□□□□□ -1.91
USB1Q9BQ65 RNU7-137P-201ENST00000516788 62 ntBASIC3.12□□□□□ -1.91
USB1Q9BQ65 HMSD-204ENST00000526932 162 ntTSL 3 BASIC3.12□□□□□ -1.91
USB1Q9BQ65 MIR4709-201ENST00000577272 72 ntBASIC3.12□□□□□ -1.91
USB1Q9BQ65 AC012676.2-201ENST00000619258 186 ntBASIC3.12□□□□□ -1.91
USB1Q9BQ65 Z97988.1-201ENST00000637697 135 ntBASIC3.12□□□□□ -1.91
USB1Q9BQ65 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
USB1Q9BQ65 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.11□□□□□ -1.91
USB1Q9BQ65 Y_RNA.98-201ENST00000363109 102 ntBASIC3.11□□□□□ -1.91
USB1Q9BQ65 SNORD46.1-201ENST00000364139 104 ntBASIC3.11□□□□□ -1.91
USB1Q9BQ65 PRSS3P4-201ENST00000453323 162 ntBASIC3.11□□□□□ -1.91
USB1Q9BQ65 AC234781.5-201ENST00000508429 271 ntBASIC3.11□□□□□ -1.91
USB1Q9BQ65 SNORA74.3-201ENST00000517108 154 ntBASIC3.11□□□□□ -1.91
USB1Q9BQ65 RN7SKP57-201ENST00000517248 293 ntBASIC3.11□□□□□ -1.91
USB1Q9BQ65 RNA5SP437-201ENST00000517249 129 ntBASIC3.11□□□□□ -1.91
USB1Q9BQ65 SNORA31.26-201ENST00000517250 137 ntBASIC3.11□□□□□ -1.91
USB1Q9BQ65 MIR7975-201ENST00000619350 68 ntBASIC3.11□□□□□ -1.91
USB1Q9BQ65 AC012314.7-201ENST00000619693 93 ntBASIC3.11□□□□□ -1.91
USB1Q9BQ65 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
USB1Q9BQ65 AC092435.3-201ENST00000565538 3654 ntBASIC3.11□□□□□ -1.91
USB1Q9BQ65 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
USB1Q9BQ65 RNU6-480P-201ENST00000384332 107 ntBASIC3.1□□□□□ -1.91
USB1Q9BQ65 MIR181B2-201ENST00000385004 89 ntBASIC3.1□□□□□ -1.91
USB1Q9BQ65 RNU6-602P-201ENST00000411155 105 ntBASIC3.1□□□□□ -1.91
USB1Q9BQ65 RNU7-48P-201ENST00000458875 63 ntBASIC3.1□□□□□ -1.91
USB1Q9BQ65 AC091153.1-201ENST00000466297 402 ntBASIC3.1□□□□□ -1.91
USB1Q9BQ65 RN7SKP132-201ENST00000516001 208 ntBASIC3.1□□□□□ -1.91
USB1Q9BQ65 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
USB1Q9BQ65 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
USB1Q9BQ65 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
USB1Q9BQ65 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
USB1Q9BQ65 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 176.6 ms