Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 RNU4-82P-201ENST00000362443 140 ntBASIC2.31□□□□□ -2.04
PTCHD1Q96NR3 SNORD115-12-201ENST00000362583 82 ntBASIC2.31□□□□□ -2.04
PTCHD1Q96NR3 SNORD115-29-201ENST00000362834 82 ntBASIC2.31□□□□□ -2.04
PTCHD1Q96NR3 SNORD115-9-201ENST00000362912 82 ntBASIC2.31□□□□□ -2.04
PTCHD1Q96NR3 SNORD115-21-201ENST00000362963 81 ntBASIC2.31□□□□□ -2.04
PTCHD1Q96NR3 SNORD115-14-201ENST00000363090 81 ntBASIC2.31□□□□□ -2.04
PTCHD1Q96NR3 SNORD115-13-201ENST00000363358 82 ntBASIC2.31□□□□□ -2.04
PTCHD1Q96NR3 SNORD115-41-201ENST00000363608 82 ntBASIC2.31□□□□□ -2.04
PTCHD1Q96NR3 SNORD115-11-201ENST00000363616 82 ntBASIC2.31□□□□□ -2.04
PTCHD1Q96NR3 SNORD115-5-201ENST00000363633 82 ntBASIC2.31□□□□□ -2.04
PTCHD1Q96NR3 SNORD115-39-201ENST00000363694 82 ntBASIC2.31□□□□□ -2.04
PTCHD1Q96NR3 SNORD115-4-201ENST00000363810 82 ntBASIC2.31□□□□□ -2.04
PTCHD1Q96NR3 SNORD115-16-201ENST00000363887 82 ntBASIC2.31□□□□□ -2.04
PTCHD1Q96NR3 SNORD115-6-201ENST00000363942 82 ntBASIC2.31□□□□□ -2.04
PTCHD1Q96NR3 SNORA3A-201ENST00000364113 130 ntBASIC2.31□□□□□ -2.04
PTCHD1Q96NR3 SNORD115-42-201ENST00000364273 82 ntBASIC2.31□□□□□ -2.04
PTCHD1Q96NR3 Y_RNA.281-201ENST00000364774 94 ntBASIC2.31□□□□□ -2.04
PTCHD1Q96NR3 SNORD115-15-201ENST00000364809 81 ntBASIC2.31□□□□□ -2.04
PTCHD1Q96NR3 SNORD115-1-201ENST00000364961 82 ntBASIC2.31□□□□□ -2.04
PTCHD1Q96NR3 SNORD115-26-201ENST00000365067 82 ntBASIC2.31□□□□□ -2.04
PTCHD1Q96NR3 SNORD115-10-201ENST00000365073 81 ntBASIC2.31□□□□□ -2.04
PTCHD1Q96NR3 SNORD115-43-201ENST00000365503 82 ntBASIC2.31□□□□□ -2.04
PTCHD1Q96NR3 SNORD115-36-201ENST00000365629 82 ntBASIC2.31□□□□□ -2.04
PTCHD1Q96NR3 MIR516B2-201ENST00000385190 85 ntBASIC2.31□□□□□ -2.04
PTCHD1Q96NR3 MIR1267-201ENST00000408723 78 ntBASIC2.31□□□□□ -2.04
PTCHD1Q96NR3 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.31□□□□□ -2.04
PTCHD1Q96NR3 AC093850.1-201ENST00000454121 251 ntBASIC2.31□□□□□ -2.04
PTCHD1Q96NR3 RNU7-164P-201ENST00000459221 62 ntBASIC2.31□□□□□ -2.04
PTCHD1Q96NR3 IGLV3-17-201ENST00000519099 244 ntBASIC2.31□□□□□ -2.04
PTCHD1Q96NR3 AC090821.2-201ENST00000523552 176 ntBASIC2.31□□□□□ -2.04
PTCHD1Q96NR3 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.31□□□□□ -2.04
PTCHD1Q96NR3 SNORD115-40-201ENST00000606510 82 ntBASIC2.31□□□□□ -2.04
PTCHD1Q96NR3 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.31□□□□□ -2.04
PTCHD1Q96NR3 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
PTCHD1Q96NR3 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.3□□□□□ -2.04
PTCHD1Q96NR3 MIR6073-201ENST00000352083 89 ntBASIC2.3□□□□□ -2.04
PTCHD1Q96NR3 Y_RNA.213-201ENST00000364178 111 ntBASIC2.3□□□□□ -2.04
PTCHD1Q96NR3 Y_RNA.298-201ENST00000364960 107 ntBASIC2.3□□□□□ -2.04
PTCHD1Q96NR3 Y_RNA.494-201ENST00000384432 111 ntBASIC2.3□□□□□ -2.04
PTCHD1Q96NR3 AL359511.1-201ENST00000402970 211 ntBASIC2.3□□□□□ -2.04
PTCHD1Q96NR3 SUMO2P16-201ENST00000519475 264 ntBASIC2.3□□□□□ -2.04
PTCHD1Q96NR3 AL513423.1-201ENST00000621695 132 ntBASIC2.3□□□□□ -2.04
PTCHD1Q96NR3 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
PTCHD1Q96NR3 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.29□□□□□ -2.04
PTCHD1Q96NR3 Y_RNA.116-201ENST00000363292 103 ntBASIC2.29□□□□□ -2.04
PTCHD1Q96NR3 MIR144-201ENST00000384886 86 ntBASIC2.29□□□□□ -2.04
PTCHD1Q96NR3 MIR136-201ENST00000385207 82 ntBASIC2.29□□□□□ -2.04
PTCHD1Q96NR3 SNORD12C-201ENST00000386307 89 ntBASIC2.29□□□□□ -2.04
PTCHD1Q96NR3 RNA5SP450-201ENST00000411206 102 ntBASIC2.29□□□□□ -2.04
PTCHD1Q96NR3 AL035398.1-201ENST00000430869 322 ntBASIC2.29□□□□□ -2.04
PTCHD1Q96NR3 RNU7-96P-201ENST00000459535 64 ntBASIC2.29□□□□□ -2.04
PTCHD1Q96NR3 RPS29P24-201ENST00000486345 171 ntBASIC2.29□□□□□ -2.04
PTCHD1Q96NR3 RNU6-998P-201ENST00000515894 101 ntBASIC2.29□□□□□ -2.04
PTCHD1Q96NR3 SNORA31.11-201ENST00000516528 139 ntBASIC2.29□□□□□ -2.04
PTCHD1Q96NR3 SNORA31.25-201ENST00000517242 134 ntBASIC2.29□□□□□ -2.04
PTCHD1Q96NR3 MIR4529-201ENST00000578110 78 ntBASIC2.29□□□□□ -2.04
PTCHD1Q96NR3 MIR4679-2-201ENST00000578358 77 ntBASIC2.29□□□□□ -2.04
PTCHD1Q96NR3 MIR4305-201ENST00000583252 102 ntBASIC2.29□□□□□ -2.04
PTCHD1Q96NR3 HSPE1P19-201ENST00000603327 295 ntBASIC2.29□□□□□ -2.04
PTCHD1Q96NR3 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
PTCHD1Q96NR3 RNU4-16P-201ENST00000364737 141 ntBASIC2.28□□□□□ -2.04
PTCHD1Q96NR3 RNU6-1107P-201ENST00000364817 104 ntBASIC2.28□□□□□ -2.04
PTCHD1Q96NR3 Y_RNA.549-201ENST00000384657 102 ntBASIC2.28□□□□□ -2.04
PTCHD1Q96NR3 MIR660-201ENST00000385235 97 ntBASIC2.28□□□□□ -2.04
PTCHD1Q96NR3 MIR759-201ENST00000390224 91 ntBASIC2.28□□□□□ -2.04
PTCHD1Q96NR3 RNA5SP508-201ENST00000411327 119 ntBASIC2.28□□□□□ -2.04
PTCHD1Q96NR3 AC099513.1-201ENST00000490423 301 ntBASIC2.28□□□□□ -2.04
PTCHD1Q96NR3 RNU7-123P-201ENST00000515911 60 ntBASIC2.28□□□□□ -2.04
PTCHD1Q96NR3 RNU7-193P-201ENST00000516723 65 ntBASIC2.28□□□□□ -2.04
PTCHD1Q96NR3 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.28□□□□□ -2.04
PTCHD1Q96NR3 uc_338.28-201ENST00000612082 187 ntBASIC2.28□□□□□ -2.04
PTCHD1Q96NR3 MIR302B-201ENST00000362188 73 ntBASIC2.27□□□□□ -2.05
PTCHD1Q96NR3 Y_RNA.85-201ENST00000363014 111 ntBASIC2.27□□□□□ -2.05
PTCHD1Q96NR3 SNORA1.2-201ENST00000365189 134 ntBASIC2.27□□□□□ -2.05
PTCHD1Q96NR3 RNU6-301P-201ENST00000384277 107 ntBASIC2.27□□□□□ -2.05
PTCHD1Q96NR3 SNORD23.1-201ENST00000408212 104 ntBASIC2.27□□□□□ -2.05
PTCHD1Q96NR3 RNA5SP181-201ENST00000410246 98 ntBASIC2.27□□□□□ -2.05
PTCHD1Q96NR3 RNA5SP100-201ENST00000410903 110 ntBASIC2.27□□□□□ -2.05
PTCHD1Q96NR3 RNA5SP59-201ENST00000410922 110 ntBASIC2.27□□□□□ -2.05
PTCHD1Q96NR3 PGBD4P5-201ENST00000445958 426 ntBASIC2.27□□□□□ -2.05
PTCHD1Q96NR3 AL031737.1-201ENST00000450125 223 ntBASIC2.27□□□□□ -2.05
PTCHD1Q96NR3 AC107297.1-201ENST00000459991 176 ntBASIC2.27□□□□□ -2.05
PTCHD1Q96NR3 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.27□□□□□ -2.05
PTCHD1Q96NR3 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.27□□□□□ -2.05
PTCHD1Q96NR3 RNA5SP402-201ENST00000517148 110 ntBASIC2.27□□□□□ -2.05
PTCHD1Q96NR3 MIR3683-201ENST00000580847 82 ntBASIC2.27□□□□□ -2.05
PTCHD1Q96NR3 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.27□□□□□ -2.05
PTCHD1Q96NR3 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.27□□□□□ -2.05
PTCHD1Q96NR3 SNORD3E-202ENST00000627253 216 ntBASIC2.27□□□□□ -2.05
PTCHD1Q96NR3 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
PTCHD1Q96NR3 RNY4P6-201ENST00000363667 96 ntBASIC2.26□□□□□ -2.05
PTCHD1Q96NR3 RNU6-414P-201ENST00000363705 104 ntBASIC2.26□□□□□ -2.05
PTCHD1Q96NR3 RPS12P2-201ENST00000439728 269 ntBASIC2.26□□□□□ -2.05
PTCHD1Q96NR3 AC026436.1-201ENST00000510537 270 ntBASIC2.26□□□□□ -2.05
PTCHD1Q96NR3 RNA5SP24-201ENST00000516478 95 ntBASIC2.26□□□□□ -2.05
PTCHD1Q96NR3 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
PTCHD1Q96NR3 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
PTCHD1Q96NR3 MIR450A1-201ENST00000362262 91 ntBASIC2.25□□□□□ -2.05
PTCHD1Q96NR3 Y_RNA.370-201ENST00000365589 108 ntBASIC2.25□□□□□ -2.05
PTCHD1Q96NR3 RNU6-106P-201ENST00000384405 107 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 280.2 ms