Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 SCARNA8-201ENST00000515924 131 ntBASIC0.55□□□□□ -2.32
VMP1Q96GC9 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.55□□□□□ -2.32
VMP1Q96GC9 MIR548AO-201ENST00000579992 96 ntBASIC0.55□□□□□ -2.32
VMP1Q96GC9 MIR4791-201ENST00000607666 84 ntBASIC0.55□□□□□ -2.32
VMP1Q96GC9 MTND1P7-201ENST00000632801 297 ntBASIC0.55□□□□□ -2.32
VMP1Q96GC9 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.55□□□□□ -2.32
VMP1Q96GC9 Y_RNA.118-201ENST00000363300 101 ntBASIC0.54□□□□□ -2.32
VMP1Q96GC9 RNU6-450P-201ENST00000364654 107 ntBASIC0.54□□□□□ -2.32
VMP1Q96GC9 MIR1252-201ENST00000408861 65 ntBASIC0.54□□□□□ -2.32
VMP1Q96GC9 AC023449.1-201ENST00000454464 154 ntBASIC0.54□□□□□ -2.32
VMP1Q96GC9 RNU2-13P-201ENST00000515909 113 ntBASIC0.54□□□□□ -2.32
VMP1Q96GC9 MIR6515-201ENST00000619843 57 ntBASIC0.54□□□□□ -2.32
VMP1Q96GC9 AC022140.2-201ENST00000623500 188 ntBASIC0.54□□□□□ -2.32
VMP1Q96GC9 RNA5SP347-201ENST00000362445 119 ntBASIC0.53□□□□□ -2.32
VMP1Q96GC9 Y_RNA.509-201ENST00000384506 99 ntBASIC0.53□□□□□ -2.32
VMP1Q96GC9 Y_RNA.581-201ENST00000391017 97 ntBASIC0.53□□□□□ -2.32
VMP1Q96GC9 RNU6-101P-201ENST00000410323 104 ntBASIC0.53□□□□□ -2.32
VMP1Q96GC9 RNU6-847P-201ENST00000411115 108 ntBASIC0.53□□□□□ -2.32
VMP1Q96GC9 Y_RNA.637-201ENST00000459424 114 ntBASIC0.53□□□□□ -2.32
VMP1Q96GC9 Y_RNA.721-201ENST00000517207 102 ntBASIC0.53□□□□□ -2.32
VMP1Q96GC9 AP003484.1-201ENST00000530974 250 ntBASIC0.53□□□□□ -2.32
VMP1Q96GC9 AL021707.8-201ENST00000609428 183 ntBASIC0.53□□□□□ -2.32
VMP1Q96GC9 AC013791.1-201ENST00000616619 62 ntBASIC0.53□□□□□ -2.32
VMP1Q96GC9 Y_RNA.28-201ENST00000362554 111 ntBASIC0.52□□□□□ -2.33
VMP1Q96GC9 Y_RNA.105-201ENST00000363182 111 ntBASIC0.52□□□□□ -2.33
VMP1Q96GC9 RNU6-290P-201ENST00000365212 101 ntBASIC0.52□□□□□ -2.33
VMP1Q96GC9 Y_RNA.389-201ENST00000383924 113 ntBASIC0.52□□□□□ -2.33
VMP1Q96GC9 Y_RNA.547-201ENST00000384654 119 ntBASIC0.52□□□□□ -2.33
VMP1Q96GC9 RNU6-383P-201ENST00000410864 94 ntBASIC0.52□□□□□ -2.33
VMP1Q96GC9 AL117351.2-201ENST00000513571 157 ntBASIC0.52□□□□□ -2.33
VMP1Q96GC9 RNU7-25P-201ENST00000516544 62 ntBASIC0.52□□□□□ -2.33
VMP1Q96GC9 RNU7-149P-201ENST00000516739 59 ntBASIC0.52□□□□□ -2.33
VMP1Q96GC9 AP000753.3-201ENST00000604083 169 ntBASIC0.52□□□□□ -2.33
VMP1Q96GC9 uc_338.4-201ENST00000616635 176 ntBASIC0.52□□□□□ -2.33
VMP1Q96GC9 AC243994.1-201ENST00000618627 109 ntBASIC0.52□□□□□ -2.33
VMP1Q96GC9 MIR6513-201ENST00000621188 64 ntBASIC0.52□□□□□ -2.33
VMP1Q96GC9 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
VMP1Q96GC9 MIR377-201ENST00000362145 69 ntBASIC0.51□□□□□ -2.33
VMP1Q96GC9 MT-TN-201ENST00000387400 73 ntBASIC0.51□□□□□ -2.33
VMP1Q96GC9 RNA5SP496-201ENST00000391240 109 ntBASIC0.51□□□□□ -2.33
VMP1Q96GC9 MIR548O-201ENST00000408583 114 ntBASIC0.51□□□□□ -2.33
VMP1Q96GC9 RNU6-121P-201ENST00000410525 99 ntBASIC0.51□□□□□ -2.33
VMP1Q96GC9 MTND4LP30-201ENST00000454092 297 ntBASIC0.51□□□□□ -2.33
VMP1Q96GC9 RN7SKP12-201ENST00000516275 143 ntBASIC0.51□□□□□ -2.33
VMP1Q96GC9 AL512605.2-201ENST00000592972 256 ntBASIC0.51□□□□□ -2.33
VMP1Q96GC9 Y_RNA.14-201ENST00000362415 103 ntBASIC0.5□□□□□ -2.33
VMP1Q96GC9 RNU6-1272P-201ENST00000362776 107 ntBASIC0.5□□□□□ -2.33
VMP1Q96GC9 RNY1-201ENST00000364228 113 ntBASIC0.5□□□□□ -2.33
VMP1Q96GC9 RNU6-934P-201ENST00000365154 107 ntBASIC0.5□□□□□ -2.33
VMP1Q96GC9 RNU6-580P-201ENST00000365159 107 ntBASIC0.5□□□□□ -2.33
VMP1Q96GC9 RNU6-1138P-201ENST00000365359 106 ntBASIC0.5□□□□□ -2.33
VMP1Q96GC9 Y_RNA.380-201ENST00000365663 111 ntBASIC0.5□□□□□ -2.33
VMP1Q96GC9 RNU6-474P-201ENST00000384243 107 ntBASIC0.5□□□□□ -2.33
VMP1Q96GC9 AL157398.1-201ENST00000452981 186 ntBASIC0.5□□□□□ -2.33
VMP1Q96GC9 RNU6-1132P-201ENST00000459214 107 ntBASIC0.5□□□□□ -2.33
VMP1Q96GC9 RNU6-229P-201ENST00000516614 102 ntBASIC0.5□□□□□ -2.33
VMP1Q96GC9 RNU2-31P-201ENST00000516954 155 ntBASIC0.5□□□□□ -2.33
VMP1Q96GC9 RNU6-988P-201ENST00000519081 107 ntBASIC0.5□□□□□ -2.33
VMP1Q96GC9 MIR5692C2-201ENST00000577959 77 ntBASIC0.5□□□□□ -2.33
VMP1Q96GC9 AL049861.1-201ENST00000603130 150 ntBASIC0.5□□□□□ -2.33
VMP1Q96GC9 AL160413.1-201ENST00000622780 310 ntBASIC0.5□□□□□ -2.33
VMP1Q96GC9 MIR367-201ENST00000362299 68 ntBASIC0.49□□□□□ -2.33
VMP1Q96GC9 MIR140-201ENST00000385282 100 ntBASIC0.49□□□□□ -2.33
VMP1Q96GC9 RNU6-177P-201ENST00000411257 104 ntBASIC0.49□□□□□ -2.33
VMP1Q96GC9 MTND4LP11-201ENST00000422184 280 ntBASIC0.49□□□□□ -2.33
VMP1Q96GC9 AC092628.1-201ENST00000436250 252 ntBASIC0.49□□□□□ -2.33
VMP1Q96GC9 Y_RNA.631-201ENST00000459607 101 ntBASIC0.49□□□□□ -2.33
VMP1Q96GC9 AC107297.1-201ENST00000459991 176 ntBASIC0.49□□□□□ -2.33
VMP1Q96GC9 RNU6-977P-201ENST00000516411 103 ntBASIC0.49□□□□□ -2.33
VMP1Q96GC9 SNORA40.15-201ENST00000516884 107 ntBASIC0.49□□□□□ -2.33
VMP1Q96GC9 MIR4724-201ENST00000579485 89 ntBASIC0.49□□□□□ -2.33
VMP1Q96GC9 AP001094.1-201ENST00000579805 193 ntBASIC0.49□□□□□ -2.33
VMP1Q96GC9 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.49□□□□□ -2.33
VMP1Q96GC9 MTND4P29-201ENST00000503122 1372 ntBASIC0.48□□□□□ -2.33
VMP1Q96GC9 SNORA25.1-201ENST00000362326 128 ntBASIC0.48□□□□□ -2.33
VMP1Q96GC9 snoU2_19.2-201ENST00000363024 80 ntBASIC0.48□□□□□ -2.33
VMP1Q96GC9 SNORD45.3-201ENST00000363836 72 ntBASIC0.48□□□□□ -2.33
VMP1Q96GC9 RNU6-326P-201ENST00000365480 107 ntBASIC0.48□□□□□ -2.33
VMP1Q96GC9 SNORA24-201ENST00000384096 131 ntBASIC0.48□□□□□ -2.33
VMP1Q96GC9 RNU6-514P-201ENST00000384208 107 ntBASIC0.48□□□□□ -2.33
VMP1Q96GC9 RNU6-125P-201ENST00000384505 107 ntBASIC0.48□□□□□ -2.33
VMP1Q96GC9 MIR598-201ENST00000384868 97 ntBASIC0.48□□□□□ -2.33
VMP1Q96GC9 SNORA53-201ENST00000391141 249 ntBASIC0.48□□□□□ -2.33
VMP1Q96GC9 BTF3P11-201ENST00000426582 477 ntBASIC0.48□□□□□ -2.33
VMP1Q96GC9 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.48□□□□□ -2.33
VMP1Q96GC9 snoU13.16-201ENST00000459350 104 ntBASIC0.48□□□□□ -2.33
VMP1Q96GC9 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.48□□□□□ -2.33
VMP1Q96GC9 AC037487.3-201ENST00000606668 112 ntBASIC0.48□□□□□ -2.33
VMP1Q96GC9 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.48□□□□□ -2.33
VMP1Q96GC9 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
VMP1Q96GC9 SNORD115-34-201ENST00000362441 82 ntBASIC0.47□□□□□ -2.33
VMP1Q96GC9 RNU6-369P-201ENST00000362515 102 ntBASIC0.47□□□□□ -2.33
VMP1Q96GC9 SNORD115-12-201ENST00000362583 82 ntBASIC0.47□□□□□ -2.33
VMP1Q96GC9 SNORD115-29-201ENST00000362834 82 ntBASIC0.47□□□□□ -2.33
VMP1Q96GC9 SNORD115-9-201ENST00000362912 82 ntBASIC0.47□□□□□ -2.33
VMP1Q96GC9 SNORD115-21-201ENST00000362963 81 ntBASIC0.47□□□□□ -2.33
VMP1Q96GC9 SNORD115-14-201ENST00000363090 81 ntBASIC0.47□□□□□ -2.33
VMP1Q96GC9 SNORD115-13-201ENST00000363358 82 ntBASIC0.47□□□□□ -2.33
VMP1Q96GC9 SNORD115-41-201ENST00000363608 82 ntBASIC0.47□□□□□ -2.33
VMP1Q96GC9 SNORD115-11-201ENST00000363616 82 ntBASIC0.47□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 186.9 ms