Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 Y_RNA.676-201ENST00000516393 96 ntBASIC2.19□□□□□ -2.06
RTF1Q92541 SNORA31.17-201ENST00000516953 127 ntBASIC2.19□□□□□ -2.06
RTF1Q92541 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.19□□□□□ -2.06
RTF1Q92541 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.19□□□□□ -2.06
RTF1Q92541 RNU6-833P-201ENST00000363486 107 ntBASIC2.18□□□□□ -2.06
RTF1Q92541 RNU6-457P-201ENST00000363999 107 ntBASIC2.18□□□□□ -2.06
RTF1Q92541 SNORD61-201ENST00000384252 73 ntBASIC2.18□□□□□ -2.06
RTF1Q92541 RNU6-163P-201ENST00000384396 106 ntBASIC2.18□□□□□ -2.06
RTF1Q92541 Y_RNA.542-201ENST00000384641 111 ntBASIC2.18□□□□□ -2.06
RTF1Q92541 U8.16-201ENST00000391279 133 ntBASIC2.18□□□□□ -2.06
RTF1Q92541 AC108667.1-201ENST00000428618 249 ntBASIC2.18□□□□□ -2.06
RTF1Q92541 CALM2P4-201ENST00000430810 426 ntBASIC2.18□□□□□ -2.06
RTF1Q92541 RNU7-197P-201ENST00000458836 62 ntBASIC2.18□□□□□ -2.06
RTF1Q92541 AC114811.1-201ENST00000507207 168 ntBASIC2.18□□□□□ -2.06
RTF1Q92541 Y_RNA.666-201ENST00000516187 112 ntBASIC2.18□□□□□ -2.06
RTF1Q92541 RNA5SP168-201ENST00000516642 112 ntBASIC2.18□□□□□ -2.06
RTF1Q92541 AC090142.3-201ENST00000519012 385 ntBASIC2.18□□□□□ -2.06
RTF1Q92541 AC007751.1-201ENST00000529260 376 ntBASIC2.18□□□□□ -2.06
RTF1Q92541 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.18□□□□□ -2.06
RTF1Q92541 AC021506.2-201ENST00000612354 169 ntBASIC2.18□□□□□ -2.06
RTF1Q92541 AL513423.1-201ENST00000621695 132 ntBASIC2.18□□□□□ -2.06
RTF1Q92541 RNA5SP276-201ENST00000362580 94 ntBASIC2.17□□□□□ -2.06
RTF1Q92541 RNU6-268P-201ENST00000364174 107 ntBASIC2.17□□□□□ -2.06
RTF1Q92541 RNU6-1082P-201ENST00000364574 107 ntBASIC2.17□□□□□ -2.06
RTF1Q92541 Y_RNA.497-201ENST00000384447 98 ntBASIC2.17□□□□□ -2.06
RTF1Q92541 RNU6-588P-201ENST00000410281 105 ntBASIC2.17□□□□□ -2.06
RTF1Q92541 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.17□□□□□ -2.06
RTF1Q92541 RNA5SP57-201ENST00000459463 123 ntBASIC2.17□□□□□ -2.06
RTF1Q92541 RNU6-426P-201ENST00000516464 97 ntBASIC2.17□□□□□ -2.06
RTF1Q92541 RNU6-1292P-201ENST00000383856 107 ntBASIC2.16□□□□□ -2.06
RTF1Q92541 MIR548A2-201ENST00000384956 97 ntBASIC2.16□□□□□ -2.06
RTF1Q92541 SNORA67.5-201ENST00000391036 107 ntBASIC2.16□□□□□ -2.06
RTF1Q92541 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.16□□□□□ -2.06
RTF1Q92541 AC099513.1-201ENST00000490423 301 ntBASIC2.16□□□□□ -2.06
RTF1Q92541 RNU6-693P-201ENST00000516134 107 ntBASIC2.16□□□□□ -2.06
RTF1Q92541 SNORA25.12-201ENST00000516202 82 ntBASIC2.16□□□□□ -2.06
RTF1Q92541 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.16□□□□□ -2.06
RTF1Q92541 AC132825.6-201ENST00000638861 357 ntBASIC2.16□□□□□ -2.06
RTF1Q92541 AL442644.1-201ENST00000454390 3105 ntBASIC2.16□□□□□ -2.06
RTF1Q92541 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
RTF1Q92541 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
RTF1Q92541 Y_RNA.251-201ENST00000364551 99 ntBASIC2.15□□□□□ -2.07
RTF1Q92541 MIR624-201ENST00000385217 97 ntBASIC2.15□□□□□ -2.07
RTF1Q92541 MIR891A-201ENST00000401237 79 ntBASIC2.15□□□□□ -2.07
RTF1Q92541 MIR548O-201ENST00000408583 114 ntBASIC2.15□□□□□ -2.07
RTF1Q92541 AC092991.1-201ENST00000477176 376 ntBASIC2.15□□□□□ -2.07
RTF1Q92541 RNU6-1116P-201ENST00000517269 99 ntBASIC2.15□□□□□ -2.07
RTF1Q92541 AC024614.2-201ENST00000577584 372 ntBASIC2.15□□□□□ -2.07
RTF1Q92541 AC012493.3-201ENST00000604494 112 ntBASIC2.15□□□□□ -2.07
RTF1Q92541 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.15□□□□□ -2.07
RTF1Q92541 MIR518F-201ENST00000384973 87 ntBASIC2.14□□□□□ -2.07
RTF1Q92541 RNA5SP127-201ENST00000411051 133 ntBASIC2.14□□□□□ -2.07
RTF1Q92541 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.14□□□□□ -2.07
RTF1Q92541 PGBD4P5-201ENST00000445958 426 ntBASIC2.14□□□□□ -2.07
RTF1Q92541 RNU7-12P-201ENST00000516030 62 ntBASIC2.14□□□□□ -2.07
RTF1Q92541 RNU6-1270P-201ENST00000517128 108 ntBASIC2.14□□□□□ -2.07
RTF1Q92541 AC010332.2-201ENST00000613083 1904 ntBASIC2.14□□□□□ -2.07
RTF1Q92541 RNU6-81P-201ENST00000365608 104 ntBASIC2.13□□□□□ -2.07
RTF1Q92541 SNORA1-201ENST00000384107 130 ntBASIC2.13□□□□□ -2.07
RTF1Q92541 SNORD38C-201ENST00000384381 69 ntBASIC2.13□□□□□ -2.07
RTF1Q92541 MIR660-201ENST00000385235 97 ntBASIC2.13□□□□□ -2.07
RTF1Q92541 SNORA18.4-201ENST00000516440 124 ntBASIC2.13□□□□□ -2.07
RTF1Q92541 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.13□□□□□ -2.07
RTF1Q92541 AC131055.1-201ENST00000584626 316 ntBASIC2.13□□□□□ -2.07
RTF1Q92541 AL773524.1-201ENST00000614065 229 ntBASIC2.13□□□□□ -2.07
RTF1Q92541 MIR424-201ENST00000362227 98 ntBASIC2.12□□□□□ -2.07
RTF1Q92541 SNORD48-201ENST00000364953 64 ntBASIC2.12□□□□□ -2.07
RTF1Q92541 SNORD113-1-201ENST00000365321 69 ntBASIC2.12□□□□□ -2.07
RTF1Q92541 RNU6-1336P-201ENST00000383886 109 ntBASIC2.12□□□□□ -2.07
RTF1Q92541 Y_RNA.584-201ENST00000391090 114 ntBASIC2.12□□□□□ -2.07
RTF1Q92541 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC2.12□□□□□ -2.07
RTF1Q92541 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.12□□□□□ -2.07
RTF1Q92541 RNU6-830P-201ENST00000516353 107 ntBASIC2.12□□□□□ -2.07
RTF1Q92541 MIR3129-201ENST00000581095 76 ntBASIC2.12□□□□□ -2.07
RTF1Q92541 AP001340.1-201ENST00000624405 217 ntBASIC2.12□□□□□ -2.07
RTF1Q92541 Y_RNA.410-201ENST00000383992 113 ntBASIC2.11□□□□□ -2.07
RTF1Q92541 Y_RNA.420-201ENST00000384043 110 ntBASIC2.11□□□□□ -2.07
RTF1Q92541 Y_RNA.547-201ENST00000384654 119 ntBASIC2.11□□□□□ -2.07
RTF1Q92541 SNORA40-201ENST00000388090 126 ntBASIC2.11□□□□□ -2.07
RTF1Q92541 Y_RNA.586-201ENST00000391146 98 ntBASIC2.11□□□□□ -2.07
RTF1Q92541 RNU6-257P-201ENST00000410238 98 ntBASIC2.11□□□□□ -2.07
RTF1Q92541 AC244636.1-201ENST00000421152 228 ntBASIC2.11□□□□□ -2.07
RTF1Q92541 RNU7-25P-201ENST00000516544 62 ntBASIC2.11□□□□□ -2.07
RTF1Q92541 AC022254.1-201ENST00000567857 235 ntBASIC2.11□□□□□ -2.07
RTF1Q92541 SNORD53B-201ENST00000577887 78 ntBASIC2.11□□□□□ -2.07
RTF1Q92541 MIR4303-201ENST00000581299 66 ntBASIC2.11□□□□□ -2.07
RTF1Q92541 AC134878.1-201ENST00000619901 243 ntBASIC2.11□□□□□ -2.07
RTF1Q92541 AC091895.1-201ENST00000624494 256 ntBASIC2.11□□□□□ -2.07
RTF1Q92541 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
RTF1Q92541 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
RTF1Q92541 RNU6-1123P-201ENST00000362347 106 ntBASIC2.1□□□□□ -2.07
RTF1Q92541 RNU6-661P-201ENST00000362409 107 ntBASIC2.1□□□□□ -2.07
RTF1Q92541 SNORD115-28-201ENST00000363931 81 ntBASIC2.1□□□□□ -2.07
RTF1Q92541 MIR452-201ENST00000385020 85 ntBASIC2.1□□□□□ -2.07
RTF1Q92541 AC015922.2-201ENST00000435593 184 ntBASIC2.1□□□□□ -2.07
RTF1Q92541 AL157777.2-201ENST00000258070 137 ntBASIC2.09□□□□□ -2.07
RTF1Q92541 RNY1P11-201ENST00000363759 113 ntBASIC2.09□□□□□ -2.07
RTF1Q92541 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
RTF1Q92541 SNORD77.3-201ENST00000391113 65 ntBASIC2.09□□□□□ -2.07
RTF1Q92541 RNU4-62P-201ENST00000410125 130 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 181.8 ms