Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 ELOCP20-201ENST00000422460 345 ntBASIC0.86□□□□□ -2.27
PRPF39Q86UA1 AL392103.1-201ENST00000447000 198 ntBASIC0.86□□□□□ -2.27
PRPF39Q86UA1 Y_RNA.637-201ENST00000459424 114 ntBASIC0.86□□□□□ -2.27
PRPF39Q86UA1 AC091959.1-201ENST00000495857 238 ntBASIC0.86□□□□□ -2.27
PRPF39Q86UA1 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.86□□□□□ -2.27
PRPF39Q86UA1 RNU7-149P-201ENST00000516739 59 ntBASIC0.86□□□□□ -2.27
PRPF39Q86UA1 AC025627.3-201ENST00000582078 182 ntBASIC0.86□□□□□ -2.27
PRPF39Q86UA1 AC013244.2-201ENST00000603396 103 ntBASIC0.86□□□□□ -2.27
PRPF39Q86UA1 uc_338.4-201ENST00000616635 176 ntBASIC0.86□□□□□ -2.27
PRPF39Q86UA1 RNU6-662P-201ENST00000384253 104 ntBASIC0.85□□□□□ -2.27
PRPF39Q86UA1 Y_RNA.541-201ENST00000384640 113 ntBASIC0.85□□□□□ -2.27
PRPF39Q86UA1 MIR605-201ENST00000385078 83 ntBASIC0.85□□□□□ -2.27
PRPF39Q86UA1 MIR548O-201ENST00000408583 114 ntBASIC0.85□□□□□ -2.27
PRPF39Q86UA1 RNA5SP95-201ENST00000410319 137 ntBASIC0.85□□□□□ -2.27
PRPF39Q86UA1 RNU7-25P-201ENST00000516544 62 ntBASIC0.85□□□□□ -2.27
PRPF39Q86UA1 MIR3171-201ENST00000584270 74 ntBASIC0.85□□□□□ -2.27
PRPF39Q86UA1 AC022140.2-201ENST00000623500 188 ntBASIC0.85□□□□□ -2.27
PRPF39Q86UA1 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
PRPF39Q86UA1 AC023934.1-201ENST00000574529 2389 ntBASIC0.84□□□□□ -2.27
PRPF39Q86UA1 SNORD114-2-201ENST00000363953 78 ntBASIC0.84□□□□□ -2.27
PRPF39Q86UA1 Y_RNA.214-201ENST00000364201 112 ntBASIC0.84□□□□□ -2.27
PRPF39Q86UA1 MIR215-201ENST00000384858 110 ntBASIC0.84□□□□□ -2.27
PRPF39Q86UA1 MIR613-201ENST00000385248 95 ntBASIC0.84□□□□□ -2.27
PRPF39Q86UA1 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
PRPF39Q86UA1 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.84□□□□□ -2.27
PRPF39Q86UA1 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.84□□□□□ -2.27
PRPF39Q86UA1 MIR1302-7-201ENST00000408841 72 ntBASIC0.84□□□□□ -2.27
PRPF39Q86UA1 RPL21P38-201ENST00000418090 167 ntBASIC0.84□□□□□ -2.27
PRPF39Q86UA1 AL035398.1-201ENST00000430869 322 ntBASIC0.84□□□□□ -2.27
PRPF39Q86UA1 RNU4-57P-201ENST00000515980 135 ntBASIC0.84□□□□□ -2.27
PRPF39Q86UA1 RNU6-351P-201ENST00000516097 100 ntBASIC0.84□□□□□ -2.27
PRPF39Q86UA1 AC113195.1-201ENST00000579952 141 ntBASIC0.84□□□□□ -2.27
PRPF39Q86UA1 AL353765.1-201ENST00000605514 183 ntBASIC0.84□□□□□ -2.27
PRPF39Q86UA1 AC104465.1-201ENST00000611365 139 ntBASIC0.84□□□□□ -2.27
PRPF39Q86UA1 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.84□□□□□ -2.27
PRPF39Q86UA1 AC243994.1-201ENST00000618627 109 ntBASIC0.84□□□□□ -2.27
PRPF39Q86UA1 MTND1P7-201ENST00000632801 297 ntBASIC0.84□□□□□ -2.27
PRPF39Q86UA1 snoU2_19.2-201ENST00000363024 80 ntBASIC0.83□□□□□ -2.28
PRPF39Q86UA1 Y_RNA.216-201ENST00000364205 93 ntBASIC0.83□□□□□ -2.28
PRPF39Q86UA1 Y_RNA.276-201ENST00000364732 109 ntBASIC0.83□□□□□ -2.28
PRPF39Q86UA1 RNU6-613P-201ENST00000410412 108 ntBASIC0.83□□□□□ -2.28
PRPF39Q86UA1 AC004941.2-201ENST00000427009 228 ntBASIC0.83□□□□□ -2.28
PRPF39Q86UA1 RNU6-1110P-201ENST00000516462 101 ntBASIC0.83□□□□□ -2.28
PRPF39Q86UA1 AP003733.2-201ENST00000529409 171 ntBASIC0.83□□□□□ -2.28
PRPF39Q86UA1 MIR548AO-201ENST00000579992 96 ntBASIC0.83□□□□□ -2.28
PRPF39Q86UA1 AC006006.1-201ENST00000603082 144 ntBASIC0.83□□□□□ -2.28
PRPF39Q86UA1 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
PRPF39Q86UA1 Y_RNA.202-201ENST00000364083 110 ntBASIC0.82□□□□□ -2.28
PRPF39Q86UA1 Y_RNA.241-201ENST00000364470 117 ntBASIC0.82□□□□□ -2.28
PRPF39Q86UA1 RNU6-806P-201ENST00000365147 105 ntBASIC0.82□□□□□ -2.28
PRPF39Q86UA1 RNU6-1335P-201ENST00000365426 107 ntBASIC0.82□□□□□ -2.28
PRPF39Q86UA1 Y_RNA.547-201ENST00000384654 119 ntBASIC0.82□□□□□ -2.28
PRPF39Q86UA1 MIR598-201ENST00000384868 97 ntBASIC0.82□□□□□ -2.28
PRPF39Q86UA1 SNORD99-201ENST00000408612 74 ntBASIC0.82□□□□□ -2.28
PRPF39Q86UA1 RPS26P5-201ENST00000418544 335 ntBASIC0.82□□□□□ -2.28
PRPF39Q86UA1 MIR4662B-201ENST00000579498 81 ntBASIC0.82□□□□□ -2.28
PRPF39Q86UA1 AP000753.3-201ENST00000604083 169 ntBASIC0.82□□□□□ -2.28
PRPF39Q86UA1 AC108706.1-201ENST00000611053 297 ntBASIC0.82□□□□□ -2.28
PRPF39Q86UA1 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.81□□□□□ -2.28
PRPF39Q86UA1 MIR1-1-201ENST00000362147 71 ntBASIC0.81□□□□□ -2.28
PRPF39Q86UA1 Y_RNA.64-201ENST00000362845 102 ntBASIC0.81□□□□□ -2.28
PRPF39Q86UA1 MIR146A-201ENST00000385201 99 ntBASIC0.81□□□□□ -2.28
PRPF39Q86UA1 AC113618.1-201ENST00000416747 285 ntBASIC0.81□□□□□ -2.28
PRPF39Q86UA1 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.81□□□□□ -2.28
PRPF39Q86UA1 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.81□□□□□ -2.28
PRPF39Q86UA1 RNU7-67P-201ENST00000459003 62 ntBASIC0.81□□□□□ -2.28
PRPF39Q86UA1 AC113410.1-201ENST00000505029 247 ntBASIC0.81□□□□□ -2.28
PRPF39Q86UA1 Y_RNA.666-201ENST00000516187 112 ntBASIC0.81□□□□□ -2.28
PRPF39Q86UA1 SNORA27.4-201ENST00000516650 95 ntBASIC0.81□□□□□ -2.28
PRPF39Q86UA1 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.81□□□□□ -2.28
PRPF39Q86UA1 MIR4680-201ENST00000580906 66 ntBASIC0.81□□□□□ -2.28
PRPF39Q86UA1 Y_RNA.802-201ENST00000614892 130 ntBASIC0.81□□□□□ -2.28
PRPF39Q86UA1 RNU6-797P-201ENST00000363101 109 ntBASIC0.8□□□□□ -2.28
PRPF39Q86UA1 MIR100-201ENST00000385259 80 ntBASIC0.8□□□□□ -2.28
PRPF39Q86UA1 AL606490.4-201ENST00000423117 127 ntBASIC0.8□□□□□ -2.28
PRPF39Q86UA1 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.8□□□□□ -2.28
PRPF39Q86UA1 AL021707.8-201ENST00000609428 183 ntBASIC0.8□□□□□ -2.28
PRPF39Q86UA1 MIR6866-201ENST00000638146 69 ntBASIC0.8□□□□□ -2.28
PRPF39Q86UA1 Y_RNA.168-201ENST00000363740 102 ntBASIC0.79□□□□□ -2.28
PRPF39Q86UA1 RNU6-1138P-201ENST00000365359 106 ntBASIC0.79□□□□□ -2.28
PRPF39Q86UA1 Y_RNA.376-201ENST00000365638 108 ntBASIC0.79□□□□□ -2.28
PRPF39Q86UA1 Y_RNA.587-201ENST00000391210 103 ntBASIC0.79□□□□□ -2.28
PRPF39Q86UA1 SCARNA24.2-201ENST00000516968 130 ntBASIC0.79□□□□□ -2.28
PRPF39Q86UA1 MIR4653-201ENST00000585107 83 ntBASIC0.79□□□□□ -2.28
PRPF39Q86UA1 AL356055.1-201ENST00000602528 446 ntBASIC0.79□□□□□ -2.28
PRPF39Q86UA1 MIR6835-201ENST00000621552 64 ntBASIC0.79□□□□□ -2.28
PRPF39Q86UA1 snoU18.1-201ENST00000629629 71 ntBASIC0.79□□□□□ -2.28
PRPF39Q86UA1 Y_RNA.16-201ENST00000362421 102 ntBASIC0.78□□□□□ -2.28
PRPF39Q86UA1 Y_RNA.26-201ENST00000362539 101 ntBASIC0.78□□□□□ -2.28
PRPF39Q86UA1 Y_RNA.466-201ENST00000384294 113 ntBASIC0.78□□□□□ -2.28
PRPF39Q86UA1 RNU6-110P-201ENST00000384508 104 ntBASIC0.78□□□□□ -2.28
PRPF39Q86UA1 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.78□□□□□ -2.28
PRPF39Q86UA1 AC006461.1-201ENST00000412637 326 ntBASIC0.78□□□□□ -2.28
PRPF39Q86UA1 AC020661.2-201ENST00000560114 134 ntBASIC0.78□□□□□ -2.28
PRPF39Q86UA1 AC133485.1-201ENST00000567176 124 ntBASIC0.78□□□□□ -2.28
PRPF39Q86UA1 AC138907.6-201ENST00000568401 126 ntBASIC0.78□□□□□ -2.28
PRPF39Q86UA1 AC134878.1-201ENST00000619901 243 ntBASIC0.78□□□□□ -2.28
PRPF39Q86UA1 SNORD115-28-201ENST00000363931 81 ntBASIC0.77□□□□□ -2.29
PRPF39Q86UA1 MIR526A2-201ENST00000390198 65 ntBASIC0.77□□□□□ -2.29
PRPF39Q86UA1 RNU6-205P-201ENST00000390858 107 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 213.9 ms