Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 Y_RNA.581-201ENST00000391017 97 ntBASIC0.49□□□□□ -2.33
SHMT2P34897 RNU6-823P-201ENST00000391042 103 ntBASIC0.49□□□□□ -2.33
SHMT2P34897 MIR548O-201ENST00000408583 114 ntBASIC0.49□□□□□ -2.33
SHMT2P34897 PMCHL1-202ENST00000423102 261 ntBASIC0.49□□□□□ -2.33
SHMT2P34897 Y_RNA.637-201ENST00000459424 114 ntBASIC0.49□□□□□ -2.33
SHMT2P34897 SCARNA8-201ENST00000515924 131 ntBASIC0.49□□□□□ -2.33
SHMT2P34897 RNU6-897P-201ENST00000517135 105 ntBASIC0.49□□□□□ -2.33
SHMT2P34897 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.49□□□□□ -2.33
SHMT2P34897 AC011195.1-201ENST00000578177 177 ntBASIC0.49□□□□□ -2.33
SHMT2P34897 AC243994.1-201ENST00000618627 109 ntBASIC0.49□□□□□ -2.33
SHMT2P34897 Y_RNA.376-201ENST00000365638 108 ntBASIC0.48□□□□□ -2.33
SHMT2P34897 RNU6-144P-201ENST00000383951 107 ntBASIC0.48□□□□□ -2.33
SHMT2P34897 SNORA24-201ENST00000384096 131 ntBASIC0.48□□□□□ -2.33
SHMT2P34897 RNU6-125P-201ENST00000384505 107 ntBASIC0.48□□□□□ -2.33
SHMT2P34897 Y_RNA.569-201ENST00000384749 103 ntBASIC0.48□□□□□ -2.33
SHMT2P34897 RNU6-121P-201ENST00000410525 99 ntBASIC0.48□□□□□ -2.33
SHMT2P34897 RNU6-383P-201ENST00000410864 94 ntBASIC0.48□□□□□ -2.33
SHMT2P34897 RNU6-1132P-201ENST00000459214 107 ntBASIC0.48□□□□□ -2.33
SHMT2P34897 snoU13.21-201ENST00000459368 105 ntBASIC0.48□□□□□ -2.33
SHMT2P34897 RNU7-149P-201ENST00000516739 59 ntBASIC0.48□□□□□ -2.33
SHMT2P34897 AC013791.1-201ENST00000616619 62 ntBASIC0.48□□□□□ -2.33
SHMT2P34897 AC090971.5-201ENST00000621102 293 ntBASIC0.48□□□□□ -2.33
SHMT2P34897 MIR1-1-201ENST00000362147 71 ntBASIC0.47□□□□□ -2.33
SHMT2P34897 RNU6-1272P-201ENST00000362776 107 ntBASIC0.47□□□□□ -2.33
SHMT2P34897 RNU6-945P-201ENST00000383947 107 ntBASIC0.47□□□□□ -2.33
SHMT2P34897 RNU6-205P-201ENST00000390858 107 ntBASIC0.47□□□□□ -2.33
SHMT2P34897 AC114737.2-201ENST00000421583 173 ntBASIC0.47□□□□□ -2.33
SHMT2P34897 MIR4264-201ENST00000583520 66 ntBASIC0.47□□□□□ -2.33
SHMT2P34897 uc_338.4-201ENST00000616635 176 ntBASIC0.47□□□□□ -2.33
SHMT2P34897 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
SHMT2P34897 Y_RNA.118-201ENST00000363300 101 ntBASIC0.46□□□□□ -2.34
SHMT2P34897 RNU6-290P-201ENST00000365212 101 ntBASIC0.46□□□□□ -2.34
SHMT2P34897 RNU6-1138P-201ENST00000365359 106 ntBASIC0.46□□□□□ -2.34
SHMT2P34897 RNY1P8-201ENST00000383970 114 ntBASIC0.46□□□□□ -2.34
SHMT2P34897 Y_RNA.509-201ENST00000384506 99 ntBASIC0.46□□□□□ -2.34
SHMT2P34897 MIR1252-201ENST00000408861 65 ntBASIC0.46□□□□□ -2.34
SHMT2P34897 AC090844.1-201ENST00000422019 156 ntBASIC0.46□□□□□ -2.34
SHMT2P34897 RNU4-54P-201ENST00000516428 129 ntBASIC0.46□□□□□ -2.34
SHMT2P34897 RNU6-229P-201ENST00000516614 102 ntBASIC0.46□□□□□ -2.34
SHMT2P34897 AL049861.1-201ENST00000603130 150 ntBASIC0.46□□□□□ -2.34
SHMT2P34897 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.45□□□□□ -2.34
SHMT2P34897 SNORD18A-201ENST00000363753 72 ntBASIC0.45□□□□□ -2.34
SHMT2P34897 RNY1-201ENST00000364228 113 ntBASIC0.45□□□□□ -2.34
SHMT2P34897 Y_RNA.431-201ENST00000384086 102 ntBASIC0.45□□□□□ -2.34
SHMT2P34897 Y_RNA.494-201ENST00000384432 111 ntBASIC0.45□□□□□ -2.34
SHMT2P34897 MIR598-201ENST00000384868 97 ntBASIC0.45□□□□□ -2.34
SHMT2P34897 MIR573-201ENST00000384964 99 ntBASIC0.45□□□□□ -2.34
SHMT2P34897 AC098934.3-201ENST00000430450 190 ntBASIC0.45□□□□□ -2.34
SHMT2P34897 AC023449.1-201ENST00000454464 154 ntBASIC0.45□□□□□ -2.34
SHMT2P34897 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.45□□□□□ -2.34
SHMT2P34897 SNORD77.4-201ENST00000516158 81 ntBASIC0.45□□□□□ -2.34
SHMT2P34897 AC007751.1-201ENST00000529260 376 ntBASIC0.45□□□□□ -2.34
SHMT2P34897 AP000753.3-201ENST00000604083 169 ntBASIC0.45□□□□□ -2.34
SHMT2P34897 AC243829.3-201ENST00000622177 108 ntBASIC0.45□□□□□ -2.34
SHMT2P34897 MIR5087-201ENST00000635826 76 ntBASIC0.45□□□□□ -2.34
SHMT2P34897 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.45□□□□□ -2.34
SHMT2P34897 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
SHMT2P34897 SNORD115-34-201ENST00000362441 82 ntBASIC0.44□□□□□ -2.34
SHMT2P34897 Y_RNA.28-201ENST00000362554 111 ntBASIC0.44□□□□□ -2.34
SHMT2P34897 SNORD115-12-201ENST00000362583 82 ntBASIC0.44□□□□□ -2.34
SHMT2P34897 SNORD115-29-201ENST00000362834 82 ntBASIC0.44□□□□□ -2.34
SHMT2P34897 SNORD115-9-201ENST00000362912 82 ntBASIC0.44□□□□□ -2.34
SHMT2P34897 SNORD115-21-201ENST00000362963 81 ntBASIC0.44□□□□□ -2.34
SHMT2P34897 SNORD115-14-201ENST00000363090 81 ntBASIC0.44□□□□□ -2.34
SHMT2P34897 SNORD115-13-201ENST00000363358 82 ntBASIC0.44□□□□□ -2.34
SHMT2P34897 SNORD115-41-201ENST00000363608 82 ntBASIC0.44□□□□□ -2.34
SHMT2P34897 SNORD115-11-201ENST00000363616 82 ntBASIC0.44□□□□□ -2.34
SHMT2P34897 SNORD115-5-201ENST00000363633 82 ntBASIC0.44□□□□□ -2.34
SHMT2P34897 SNORD115-39-201ENST00000363694 82 ntBASIC0.44□□□□□ -2.34
SHMT2P34897 SNORD115-4-201ENST00000363810 82 ntBASIC0.44□□□□□ -2.34
SHMT2P34897 SNORD115-16-201ENST00000363887 82 ntBASIC0.44□□□□□ -2.34
SHMT2P34897 SNORD115-6-201ENST00000363942 82 ntBASIC0.44□□□□□ -2.34
SHMT2P34897 SNORD115-42-201ENST00000364273 82 ntBASIC0.44□□□□□ -2.34
SHMT2P34897 SNORD115-15-201ENST00000364809 81 ntBASIC0.44□□□□□ -2.34
SHMT2P34897 SNORD115-1-201ENST00000364961 82 ntBASIC0.44□□□□□ -2.34
SHMT2P34897 SNORD115-26-201ENST00000365067 82 ntBASIC0.44□□□□□ -2.34
SHMT2P34897 SNORD115-10-201ENST00000365073 81 ntBASIC0.44□□□□□ -2.34
SHMT2P34897 SNORD115-43-201ENST00000365503 82 ntBASIC0.44□□□□□ -2.34
SHMT2P34897 SNORD115-36-201ENST00000365629 82 ntBASIC0.44□□□□□ -2.34
SHMT2P34897 RNA5SP496-201ENST00000391240 109 ntBASIC0.44□□□□□ -2.34
SHMT2P34897 MIR936-201ENST00000401264 98 ntBASIC0.44□□□□□ -2.34
SHMT2P34897 RNA5SP222-201ENST00000411039 105 ntBASIC0.44□□□□□ -2.34
SHMT2P34897 RNU6-177P-201ENST00000411257 104 ntBASIC0.44□□□□□ -2.34
SHMT2P34897 SNORD83.1-201ENST00000411362 77 ntBASIC0.44□□□□□ -2.34
SHMT2P34897 MTATP6P23-201ENST00000440153 476 ntBASIC0.44□□□□□ -2.34
SHMT2P34897 snoU13.16-201ENST00000459350 104 ntBASIC0.44□□□□□ -2.34
SHMT2P34897 AC091959.1-201ENST00000495857 238 ntBASIC0.44□□□□□ -2.34
SHMT2P34897 RNA5SP436-201ENST00000516020 115 ntBASIC0.44□□□□□ -2.34
SHMT2P34897 Y_RNA.666-201ENST00000516187 112 ntBASIC0.44□□□□□ -2.34
SHMT2P34897 AC018659.1-201ENST00000551083 169 ntBASIC0.44□□□□□ -2.34
SHMT2P34897 MIR5692C2-201ENST00000577959 77 ntBASIC0.44□□□□□ -2.34
SHMT2P34897 SNORD115-40-201ENST00000606510 82 ntBASIC0.44□□□□□ -2.34
SHMT2P34897 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.44□□□□□ -2.34
SHMT2P34897 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.44□□□□□ -2.34
SHMT2P34897 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.44□□□□□ -2.34
SHMT2P34897 MIR367-201ENST00000362299 68 ntBASIC0.43□□□□□ -2.34
SHMT2P34897 Y_RNA.14-201ENST00000362415 103 ntBASIC0.43□□□□□ -2.34
SHMT2P34897 snoU2_19.2-201ENST00000363024 80 ntBASIC0.43□□□□□ -2.34
SHMT2P34897 Y_RNA.241-201ENST00000364470 117 ntBASIC0.43□□□□□ -2.34
SHMT2P34897 RNU6-474P-201ENST00000384243 107 ntBASIC0.43□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 207.9 ms