Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 SNORD115-29-201ENST00000362834 82 ntBASIC2.02□□□□□ -2.09
PTX3P26022 SNORD115-9-201ENST00000362912 82 ntBASIC2.02□□□□□ -2.09
PTX3P26022 SNORD115-21-201ENST00000362963 81 ntBASIC2.02□□□□□ -2.09
PTX3P26022 SNORD115-14-201ENST00000363090 81 ntBASIC2.02□□□□□ -2.09
PTX3P26022 SNORD115-13-201ENST00000363358 82 ntBASIC2.02□□□□□ -2.09
PTX3P26022 SNORD115-41-201ENST00000363608 82 ntBASIC2.02□□□□□ -2.09
PTX3P26022 SNORD115-11-201ENST00000363616 82 ntBASIC2.02□□□□□ -2.09
PTX3P26022 SNORD115-5-201ENST00000363633 82 ntBASIC2.02□□□□□ -2.09
PTX3P26022 SNORD115-39-201ENST00000363694 82 ntBASIC2.02□□□□□ -2.09
PTX3P26022 SNORD115-4-201ENST00000363810 82 ntBASIC2.02□□□□□ -2.09
PTX3P26022 SNORD115-16-201ENST00000363887 82 ntBASIC2.02□□□□□ -2.09
PTX3P26022 SNORD115-6-201ENST00000363942 82 ntBASIC2.02□□□□□ -2.09
PTX3P26022 SNORD115-42-201ENST00000364273 82 ntBASIC2.02□□□□□ -2.09
PTX3P26022 SNORD115-15-201ENST00000364809 81 ntBASIC2.02□□□□□ -2.09
PTX3P26022 SNORD115-1-201ENST00000364961 82 ntBASIC2.02□□□□□ -2.09
PTX3P26022 SNORD115-26-201ENST00000365067 82 ntBASIC2.02□□□□□ -2.09
PTX3P26022 SNORD115-10-201ENST00000365073 81 ntBASIC2.02□□□□□ -2.09
PTX3P26022 SNORA2.2-201ENST00000365473 135 ntBASIC2.02□□□□□ -2.09
PTX3P26022 SNORD115-43-201ENST00000365503 82 ntBASIC2.02□□□□□ -2.09
PTX3P26022 SNORD115-36-201ENST00000365629 82 ntBASIC2.02□□□□□ -2.09
PTX3P26022 Y_RNA.440-201ENST00000384120 114 ntBASIC2.02□□□□□ -2.09
PTX3P26022 RNU6-80P-201ENST00000384195 107 ntBASIC2.02□□□□□ -2.09
PTX3P26022 MIR516B2-201ENST00000385190 85 ntBASIC2.02□□□□□ -2.09
PTX3P26022 U8.17-201ENST00000391292 132 ntBASIC2.02□□□□□ -2.09
PTX3P26022 MIR1267-201ENST00000408723 78 ntBASIC2.02□□□□□ -2.09
PTX3P26022 RNU6-717P-201ENST00000459076 104 ntBASIC2.02□□□□□ -2.09
PTX3P26022 RNA5SP233-201ENST00000459153 113 ntBASIC2.02□□□□□ -2.09
PTX3P26022 RNA5SP236-201ENST00000516169 116 ntBASIC2.02□□□□□ -2.09
PTX3P26022 RNU6-971P-201ENST00000516920 106 ntBASIC2.02□□□□□ -2.09
PTX3P26022 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.02□□□□□ -2.09
PTX3P26022 SNORD115-40-201ENST00000606510 82 ntBASIC2.02□□□□□ -2.09
PTX3P26022 AL590808.1-201ENST00000618696 141 ntBASIC2.02□□□□□ -2.09
PTX3P26022 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.02□□□□□ -2.09
PTX3P26022 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
PTX3P26022 RNU6-22P-201ENST00000384355 107 ntBASIC2.01□□□□□ -2.09
PTX3P26022 RNU6-1081P-201ENST00000384537 107 ntBASIC2.01□□□□□ -2.09
PTX3P26022 MIR526A1-201ENST00000384897 85 ntBASIC2.01□□□□□ -2.09
PTX3P26022 AL356379.1-201ENST00000414105 126 ntBASIC2.01□□□□□ -2.09
PTX3P26022 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.01□□□□□ -2.09
PTX3P26022 AC008267.6-201ENST00000441664 139 ntBASIC2.01□□□□□ -2.09
PTX3P26022 RNU6-1211P-201ENST00000459179 105 ntBASIC2.01□□□□□ -2.09
PTX3P26022 RNU7-80P-201ENST00000459562 61 ntBASIC2.01□□□□□ -2.09
PTX3P26022 RNU6-113P-201ENST00000516653 101 ntBASIC2.01□□□□□ -2.09
PTX3P26022 MIR3121-201ENST00000579680 77 ntBASIC2.01□□□□□ -2.09
PTX3P26022 MIR8074-201ENST00000615081 81 ntBASIC2.01□□□□□ -2.09
PTX3P26022 MIR376A2-201ENST00000636782 80 ntBASIC2.01□□□□□ -2.09
PTX3P26022 RNU6-457P-201ENST00000363999 107 ntBASIC2□□□□□ -2.09
PTX3P26022 Y_RNA.500-201ENST00000384466 111 ntBASIC2□□□□□ -2.09
PTX3P26022 RNA5SP425-201ENST00000410336 112 ntBASIC2□□□□□ -2.09
PTX3P26022 RNA5SP508-201ENST00000411327 119 ntBASIC2□□□□□ -2.09
PTX3P26022 AC107297.1-201ENST00000459991 176 ntBASIC2□□□□□ -2.09
PTX3P26022 UBE2DNL-203ENST00000474922 222 ntBASIC2□□□□□ -2.09
PTX3P26022 RNU6-479P-201ENST00000516348 105 ntBASIC2□□□□□ -2.09
PTX3P26022 SNORA18.7-201ENST00000516910 131 ntBASIC2□□□□□ -2.09
PTX3P26022 SUMO2P16-201ENST00000519475 264 ntBASIC2□□□□□ -2.09
PTX3P26022 MIR1273D-201ENST00000577266 86 ntBASIC2□□□□□ -2.09
PTX3P26022 MIR4435-1-201ENST00000582552 80 ntBASIC2□□□□□ -2.09
PTX3P26022 AL627230.6-201ENST00000611129 280 ntBASIC2□□□□□ -2.09
PTX3P26022 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2□□□□□ -2.09
PTX3P26022 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
PTX3P26022 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
PTX3P26022 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
PTX3P26022 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.99□□□□□ -2.09
PTX3P26022 Y_RNA.241-201ENST00000364470 117 ntBASIC1.99□□□□□ -2.09
PTX3P26022 RNA5SP138-201ENST00000365098 114 ntBASIC1.99□□□□□ -2.09
PTX3P26022 RNU6-439P-201ENST00000384188 106 ntBASIC1.99□□□□□ -2.09
PTX3P26022 Y_RNA.454-201ENST00000384224 113 ntBASIC1.99□□□□□ -2.09
PTX3P26022 SNORA27-201ENST00000384323 126 ntBASIC1.99□□□□□ -2.09
PTX3P26022 MIR513A1-201ENST00000385138 129 ntBASIC1.99□□□□□ -2.09
PTX3P26022 MIR653-201ENST00000385279 96 ntBASIC1.99□□□□□ -2.09
PTX3P26022 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
PTX3P26022 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.99□□□□□ -2.09
PTX3P26022 SNORA44.1-201ENST00000517031 108 ntBASIC1.99□□□□□ -2.09
PTX3P26022 DEFB122-202ENST00000569013 197 ntBASIC1.99□□□□□ -2.09
PTX3P26022 FAM106DP-201ENST00000586416 501 ntBASIC1.99□□□□□ -2.09
PTX3P26022 AC095038.3-201ENST00000634439 195 ntBASIC1.99□□□□□ -2.09
PTX3P26022 MIR219B-201ENST00000637023 88 ntBASIC1.99□□□□□ -2.09
PTX3P26022 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.98□□□□□ -2.09
PTX3P26022 Y_RNA.71-201ENST00000362892 104 ntBASIC1.98□□□□□ -2.09
PTX3P26022 SNORD116-14-201ENST00000383894 92 ntBASIC1.98□□□□□ -2.09
PTX3P26022 SNORD116-17-201ENST00000383929 92 ntBASIC1.98□□□□□ -2.09
PTX3P26022 SNORD116-15-201ENST00000384445 92 ntBASIC1.98□□□□□ -2.09
PTX3P26022 SNORD116-19-201ENST00000384729 92 ntBASIC1.98□□□□□ -2.09
PTX3P26022 Z98742.3-201ENST00000418637 326 ntBASIC1.98□□□□□ -2.09
PTX3P26022 RNU6-322P-201ENST00000516010 103 ntBASIC1.98□□□□□ -2.09
PTX3P26022 RNU7-70P-201ENST00000516941 66 ntBASIC1.98□□□□□ -2.09
PTX3P26022 RNU7-181P-201ENST00000517234 74 ntBASIC1.98□□□□□ -2.09
PTX3P26022 AC090049.2-201ENST00000550377 109 ntBASIC1.98□□□□□ -2.09
PTX3P26022 SNORA77B-201ENST00000578179 125 ntBASIC1.98□□□□□ -2.09
PTX3P26022 AL022345.2-201ENST00000606307 135 ntBASIC1.98□□□□□ -2.09
PTX3P26022 AC064859.1-201ENST00000624741 174 ntBASIC1.98□□□□□ -2.09
PTX3P26022 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
PTX3P26022 RNU6-647P-201ENST00000364243 107 ntBASIC1.97□□□□□ -2.09
PTX3P26022 RNU6-309P-201ENST00000364573 106 ntBASIC1.97□□□□□ -2.09
PTX3P26022 Y_RNA.280-201ENST00000364765 112 ntBASIC1.97□□□□□ -2.09
PTX3P26022 Y_RNA.351-201ENST00000365436 96 ntBASIC1.97□□□□□ -2.09
PTX3P26022 Y_RNA.370-201ENST00000365589 108 ntBASIC1.97□□□□□ -2.09
PTX3P26022 SNORA70.7-201ENST00000384159 133 ntBASIC1.97□□□□□ -2.09
PTX3P26022 RNU6-1067P-201ENST00000384752 107 ntBASIC1.97□□□□□ -2.09
PTX3P26022 MIR23A-201ENST00000385245 73 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 193 ms