Protein–RNA interactions for Protein: P0DPA3

SNHG28, Putative uncharacterized protein SNHG28, humanhuman

Predictions only

Length 235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28P0DPA3 SNORA48.11-201ENST00000517015 89 ntBASIC1.9□□□□□ -2.11
SNHG28P0DPA3 RNU6-667P-201ENST00000517186 102 ntBASIC1.9□□□□□ -2.11
SNHG28P0DPA3 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.9□□□□□ -2.11
SNHG28P0DPA3 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.9□□□□□ -2.11
SNHG28P0DPA3 AC022513.1-201ENST00000624512 117 ntBASIC1.9□□□□□ -2.11
SNHG28P0DPA3 AL359851.1-201ENST00000569460 4997 ntBASIC1.9□□□□□ -2.11
SNHG28P0DPA3 SNORA1B-201ENST00000362535 133 ntBASIC1.89□□□□□ -2.11
SNHG28P0DPA3 Y_RNA.366-201ENST00000365540 102 ntBASIC1.89□□□□□ -2.11
SNHG28P0DPA3 MIR522-201ENST00000385071 87 ntBASIC1.89□□□□□ -2.11
SNHG28P0DPA3 RNU6-554P-201ENST00000410466 106 ntBASIC1.89□□□□□ -2.11
SNHG28P0DPA3 AC099677.2-201ENST00000436385 175 ntBASIC1.89□□□□□ -2.11
SNHG28P0DPA3 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.89□□□□□ -2.11
SNHG28P0DPA3 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.89□□□□□ -2.11
SNHG28P0DPA3 RNA5SP364-201ENST00000516938 78 ntBASIC1.89□□□□□ -2.11
SNHG28P0DPA3 MIR5582-201ENST00000579697 68 ntBASIC1.89□□□□□ -2.11
SNHG28P0DPA3 AP000942.3-201ENST00000603702 160 ntBASIC1.89□□□□□ -2.11
SNHG28P0DPA3 MIR5739-201ENST00000619803 80 ntBASIC1.89□□□□□ -2.11
SNHG28P0DPA3 AL121890.5-201ENST00000620848 304 ntBASIC1.89□□□□□ -2.11
SNHG28P0DPA3 MIR6079-201ENST00000635807 62 ntBASIC1.89□□□□□ -2.11
SNHG28P0DPA3 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.89□□□□□ -2.11
SNHG28P0DPA3 Y_RNA.267-201ENST00000364679 109 ntBASIC1.88□□□□□ -2.11
SNHG28P0DPA3 RNU6-1292P-201ENST00000383856 107 ntBASIC1.88□□□□□ -2.11
SNHG28P0DPA3 MIR1253-201ENST00000408273 105 ntBASIC1.88□□□□□ -2.11
SNHG28P0DPA3 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.88□□□□□ -2.11
SNHG28P0DPA3 SNRPGP14-201ENST00000435400 219 ntBASIC1.88□□□□□ -2.11
SNHG28P0DPA3 SNORA4.4-201ENST00000515921 135 ntBASIC1.88□□□□□ -2.11
SNHG28P0DPA3 RNU6-693P-201ENST00000516134 107 ntBASIC1.88□□□□□ -2.11
SNHG28P0DPA3 RNU6-504P-201ENST00000516568 104 ntBASIC1.88□□□□□ -2.11
SNHG28P0DPA3 AC024614.2-201ENST00000577584 372 ntBASIC1.88□□□□□ -2.11
SNHG28P0DPA3 SNORD14A-201ENST00000606526 91 ntBASIC1.88□□□□□ -2.11
SNHG28P0DPA3 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.88□□□□□ -2.11
SNHG28P0DPA3 MIR7157-201ENST00000635801 60 ntBASIC1.88□□□□□ -2.11
SNHG28P0DPA3 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
SNHG28P0DPA3 MIR126-201ENST00000362291 85 ntBASIC1.87□□□□□ -2.11
SNHG28P0DPA3 Y_RNA.116-201ENST00000363292 103 ntBASIC1.87□□□□□ -2.11
SNHG28P0DPA3 SNORA3A-201ENST00000364113 130 ntBASIC1.87□□□□□ -2.11
SNHG28P0DPA3 SNORD18B-201ENST00000365659 72 ntBASIC1.87□□□□□ -2.11
SNHG28P0DPA3 Y_RNA.495-201ENST00000384435 112 ntBASIC1.87□□□□□ -2.11
SNHG28P0DPA3 MIR520G-201ENST00000385064 90 ntBASIC1.87□□□□□ -2.11
SNHG28P0DPA3 RNU6-938P-201ENST00000411285 103 ntBASIC1.87□□□□□ -2.11
SNHG28P0DPA3 EDDM3CP-201ENST00000415977 425 ntBASIC1.87□□□□□ -2.11
SNHG28P0DPA3 BX510359.4-201ENST00000423750 193 ntBASIC1.87□□□□□ -2.11
SNHG28P0DPA3 AC108667.1-201ENST00000428618 249 ntBASIC1.87□□□□□ -2.11
SNHG28P0DPA3 RNA5SP233-201ENST00000459153 113 ntBASIC1.87□□□□□ -2.11
SNHG28P0DPA3 AL163195.1-201ENST00000496941 348 ntBASIC1.87□□□□□ -2.11
SNHG28P0DPA3 SNORA31.4-201ENST00000516049 129 ntBASIC1.87□□□□□ -2.11
SNHG28P0DPA3 RNU6-341P-201ENST00000516973 96 ntBASIC1.87□□□□□ -2.11
SNHG28P0DPA3 MIR4662B-201ENST00000579498 81 ntBASIC1.87□□□□□ -2.11
SNHG28P0DPA3 MIR4303-201ENST00000581299 66 ntBASIC1.87□□□□□ -2.11
SNHG28P0DPA3 AC022217.4-201ENST00000604389 163 ntBASIC1.87□□□□□ -2.11
SNHG28P0DPA3 AC022202.1-201ENST00000613515 211 ntBASIC1.87□□□□□ -2.11
SNHG28P0DPA3 JPX_2.1-201ENST00000614161 69 ntBASIC1.87□□□□□ -2.11
SNHG28P0DPA3 AL035470.1-201ENST00000622571 220 ntBASIC1.87□□□□□ -2.11
SNHG28P0DPA3 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.87□□□□□ -2.11
SNHG28P0DPA3 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.86□□□□□ -2.11
SNHG28P0DPA3 AC018630.2-201ENST00000534866 2403 ntBASIC1.86□□□□□ -2.11
SNHG28P0DPA3 RNU6-661P-201ENST00000362409 107 ntBASIC1.86□□□□□ -2.11
SNHG28P0DPA3 SNORA25B-201ENST00000365507 128 ntBASIC1.86□□□□□ -2.11
SNHG28P0DPA3 SNORD24-201ENST00000383884 75 ntBASIC1.86□□□□□ -2.11
SNHG28P0DPA3 RNU6-905P-201ENST00000384434 107 ntBASIC1.86□□□□□ -2.11
SNHG28P0DPA3 Y_RNA.528-201ENST00000384575 108 ntBASIC1.86□□□□□ -2.11
SNHG28P0DPA3 MIR17-201ENST00000385012 84 ntBASIC1.86□□□□□ -2.11
SNHG28P0DPA3 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.86□□□□□ -2.11
SNHG28P0DPA3 AL355297.2-201ENST00000604792 129 ntBASIC1.86□□□□□ -2.11
SNHG28P0DPA3 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.86□□□□□ -2.11
SNHG28P0DPA3 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.86□□□□□ -2.11
SNHG28P0DPA3 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
SNHG28P0DPA3 RNU6-862P-201ENST00000362804 105 ntBASIC1.85□□□□□ -2.11
SNHG28P0DPA3 RNU6-640P-201ENST00000363693 105 ntBASIC1.85□□□□□ -2.11
SNHG28P0DPA3 RNU6-880P-201ENST00000384526 107 ntBASIC1.85□□□□□ -2.11
SNHG28P0DPA3 AL356379.1-201ENST00000414105 126 ntBASIC1.85□□□□□ -2.11
SNHG28P0DPA3 FTH1P12-201ENST00000432137 551 ntBASIC1.85□□□□□ -2.11
SNHG28P0DPA3 AL353689.1-201ENST00000438895 199 ntBASIC1.85□□□□□ -2.11
SNHG28P0DPA3 AC023449.1-201ENST00000454464 154 ntBASIC1.85□□□□□ -2.11
SNHG28P0DPA3 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.85□□□□□ -2.11
SNHG28P0DPA3 RNU7-25P-201ENST00000516544 62 ntBASIC1.85□□□□□ -2.11
SNHG28P0DPA3 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.85□□□□□ -2.11
SNHG28P0DPA3 AC007229.1-201ENST00000590455 412 ntBASIC1.85□□□□□ -2.11
SNHG28P0DPA3 HSPE1P19-201ENST00000603327 295 ntBASIC1.85□□□□□ -2.11
SNHG28P0DPA3 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
SNHG28P0DPA3 Y_RNA.281-201ENST00000364774 94 ntBASIC1.84□□□□□ -2.11
SNHG28P0DPA3 Y_RNA.309-201ENST00000365046 111 ntBASIC1.84□□□□□ -2.11
SNHG28P0DPA3 Y_RNA.346-201ENST00000365385 112 ntBASIC1.84□□□□□ -2.11
SNHG28P0DPA3 Y_RNA.348-201ENST00000365403 103 ntBASIC1.84□□□□□ -2.11
SNHG28P0DPA3 SNORA51.10-201ENST00000384418 136 ntBASIC1.84□□□□□ -2.11
SNHG28P0DPA3 RNU6-1104P-201ENST00000384723 104 ntBASIC1.84□□□□□ -2.11
SNHG28P0DPA3 SNORA26-201ENST00000391286 122 ntBASIC1.84□□□□□ -2.11
SNHG28P0DPA3 SNRPGP13-201ENST00000442212 177 ntBASIC1.84□□□□□ -2.11
SNHG28P0DPA3 AL049830.1-201ENST00000468034 425 ntBASIC1.84□□□□□ -2.11
SNHG28P0DPA3 RNU6-240P-201ENST00000516098 97 ntBASIC1.84□□□□□ -2.11
SNHG28P0DPA3 SNORD36C-201ENST00000516733 66 ntBASIC1.84□□□□□ -2.11
SNHG28P0DPA3 RNU6-1116P-201ENST00000517269 99 ntBASIC1.84□□□□□ -2.11
SNHG28P0DPA3 AC007012.1-201ENST00000567192 175 ntBASIC1.84□□□□□ -2.11
SNHG28P0DPA3 MIR3169-201ENST00000578032 83 ntBASIC1.84□□□□□ -2.11
SNHG28P0DPA3 AC078899.2-201ENST00000595282 212 ntBASIC1.84□□□□□ -2.11
SNHG28P0DPA3 AL353149.1-201ENST00000610667 244 ntBASIC1.84□□□□□ -2.11
SNHG28P0DPA3 AL359075.3-201ENST00000613288 217 ntBASIC1.84□□□□□ -2.11
SNHG28P0DPA3 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.84□□□□□ -2.12
SNHG28P0DPA3 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
SNHG28P0DPA3 ICE2P2-201ENST00000483823 2787 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 178.7 ms