Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 RNA5SP496-201ENST00000391240 109 ntBASIC0.8□□□□□ -2.28
TIMP1P01033 AC023449.1-201ENST00000454464 154 ntBASIC0.8□□□□□ -2.28
TIMP1P01033 Y_RNA.641-201ENST00000459414 105 ntBASIC0.8□□□□□ -2.28
TIMP1P01033 RPS26P48-201ENST00000491713 339 ntBASIC0.8□□□□□ -2.28
TIMP1P01033 AL589743.1-201ENST00000551932 2712 ntBASIC0.79□□□□□ -2.28
TIMP1P01033 UBE2WP1-201ENST00000362030 340 ntBASIC0.79□□□□□ -2.28
TIMP1P01033 Y_RNA.16-201ENST00000362421 102 ntBASIC0.79□□□□□ -2.28
TIMP1P01033 RNA5SP264-201ENST00000363115 107 ntBASIC0.79□□□□□ -2.28
TIMP1P01033 RNU6-1187P-201ENST00000364771 110 ntBASIC0.79□□□□□ -2.28
TIMP1P01033 RNU6-662P-201ENST00000384253 104 ntBASIC0.79□□□□□ -2.28
TIMP1P01033 SNORD72-201ENST00000390994 80 ntBASIC0.79□□□□□ -2.28
TIMP1P01033 RNU6-1109P-201ENST00000391187 107 ntBASIC0.79□□□□□ -2.28
TIMP1P01033 RNU6-1203P-201ENST00000410703 110 ntBASIC0.79□□□□□ -2.28
TIMP1P01033 AC113618.1-201ENST00000416747 285 ntBASIC0.79□□□□□ -2.28
TIMP1P01033 AC063976.4-201ENST00000421971 163 ntBASIC0.79□□□□□ -2.28
TIMP1P01033 BTF3P11-201ENST00000426582 477 ntBASIC0.79□□□□□ -2.28
TIMP1P01033 AC002429.1-201ENST00000437672 148 ntBASIC0.79□□□□□ -2.28
TIMP1P01033 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.79□□□□□ -2.28
TIMP1P01033 SERF1AP1-201ENST00000514575 187 ntBASIC0.79□□□□□ -2.28
TIMP1P01033 RNU7-41P-201ENST00000515917 61 ntBASIC0.79□□□□□ -2.28
TIMP1P01033 RNU6-1338P-201ENST00000516328 91 ntBASIC0.79□□□□□ -2.28
TIMP1P01033 AP003716.2-201ENST00000528260 108 ntBASIC0.79□□□□□ -2.28
TIMP1P01033 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.79□□□□□ -2.28
TIMP1P01033 AC004812.1-201ENST00000540773 146 ntBASIC0.79□□□□□ -2.28
TIMP1P01033 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.79□□□□□ -2.28
TIMP1P01033 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.79□□□□□ -2.28
TIMP1P01033 AC006441.5-201ENST00000612680 209 ntBASIC0.79□□□□□ -2.28
TIMP1P01033 Pinc.1-201ENST00000616452 154 ntBASIC0.79□□□□□ -2.28
TIMP1P01033 AL109933.3-201ENST00000619095 188 ntBASIC0.79□□□□□ -2.28
TIMP1P01033 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.79□□□□□ -2.28
TIMP1P01033 Y_RNA.14-201ENST00000362415 103 ntBASIC0.78□□□□□ -2.28
TIMP1P01033 RNA5SP347-201ENST00000362445 119 ntBASIC0.78□□□□□ -2.28
TIMP1P01033 RNA5SP48-201ENST00000363969 126 ntBASIC0.78□□□□□ -2.28
TIMP1P01033 AL603910.2-201ENST00000407268 136 ntBASIC0.78□□□□□ -2.28
TIMP1P01033 HMGN1P33-201ENST00000432945 451 ntBASIC0.78□□□□□ -2.28
TIMP1P01033 RNU7-21P-201ENST00000459430 62 ntBASIC0.78□□□□□ -2.28
TIMP1P01033 AP003072.1-201ENST00000531740 145 ntBASIC0.78□□□□□ -2.28
TIMP1P01033 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.78□□□□□ -2.28
TIMP1P01033 MIR5688-201ENST00000580619 83 ntBASIC0.78□□□□□ -2.28
TIMP1P01033 AL021707.8-201ENST00000609428 183 ntBASIC0.78□□□□□ -2.28
TIMP1P01033 AC022140.2-201ENST00000623500 188 ntBASIC0.78□□□□□ -2.28
TIMP1P01033 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.78□□□□□ -2.29
TIMP1P01033 MIR367-201ENST00000362299 68 ntBASIC0.77□□□□□ -2.29
TIMP1P01033 Y_RNA.68-201ENST00000362881 102 ntBASIC0.77□□□□□ -2.29
TIMP1P01033 Y_RNA.293-201ENST00000364908 93 ntBASIC0.77□□□□□ -2.29
TIMP1P01033 RNU6-383P-201ENST00000410864 94 ntBASIC0.77□□□□□ -2.29
TIMP1P01033 AL358176.2-201ENST00000425769 204 ntBASIC0.77□□□□□ -2.29
TIMP1P01033 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.77□□□□□ -2.29
TIMP1P01033 MTND5P22-201ENST00000458380 195 ntBASIC0.77□□□□□ -2.29
TIMP1P01033 RNU7-90P-201ENST00000459216 62 ntBASIC0.77□□□□□ -2.29
TIMP1P01033 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.77□□□□□ -2.29
TIMP1P01033 AL442663.2-201ENST00000554385 511 ntBASIC0.77□□□□□ -2.29
TIMP1P01033 MIR4724-201ENST00000579485 89 ntBASIC0.77□□□□□ -2.29
TIMP1P01033 MIR548AR-201ENST00000582191 57 ntBASIC0.77□□□□□ -2.29
TIMP1P01033 AC006504.6-201ENST00000590142 199 ntBASIC0.77□□□□□ -2.29
TIMP1P01033 MIR8087-201ENST00000612745 78 ntBASIC0.77□□□□□ -2.29
TIMP1P01033 uc_338.4-201ENST00000616635 176 ntBASIC0.77□□□□□ -2.29
TIMP1P01033 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.77□□□□□ -2.29
TIMP1P01033 snoU18.1-201ENST00000629629 71 ntBASIC0.77□□□□□ -2.29
TIMP1P01033 AC068700.1-201ENST00000565862 3754 ntBASIC0.77□□□□□ -2.29
TIMP1P01033 Y_RNA.326-201ENST00000365176 113 ntBASIC0.76□□□□□ -2.29
TIMP1P01033 RNU6-1067P-201ENST00000384752 107 ntBASIC0.76□□□□□ -2.29
TIMP1P01033 MIR526A2-201ENST00000390198 65 ntBASIC0.76□□□□□ -2.29
TIMP1P01033 SNORA75.2-201ENST00000391138 150 ntBASIC0.76□□□□□ -2.29
TIMP1P01033 SNORA75.3-201ENST00000391231 150 ntBASIC0.76□□□□□ -2.29
TIMP1P01033 U8.17-201ENST00000391292 132 ntBASIC0.76□□□□□ -2.29
TIMP1P01033 RPL39P28-201ENST00000465655 155 ntBASIC0.76□□□□□ -2.29
TIMP1P01033 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.76□□□□□ -2.29
TIMP1P01033 RN7SKP164-201ENST00000516138 266 ntBASIC0.76□□□□□ -2.29
TIMP1P01033 SCARNA24.2-201ENST00000516968 130 ntBASIC0.76□□□□□ -2.29
TIMP1P01033 AL008718.3-201ENST00000610217 321 ntBASIC0.76□□□□□ -2.29
TIMP1P01033 AC008163.1-202ENST00000636004 2889 ntBASIC0.76□□□□□ -2.29
TIMP1P01033 MIR103A2-201ENST00000362154 78 ntBASIC0.75□□□□□ -2.29
TIMP1P01033 MIR330-201ENST00000362196 94 ntBASIC0.75□□□□□ -2.29
TIMP1P01033 Y_RNA.85-201ENST00000363014 111 ntBASIC0.75□□□□□ -2.29
TIMP1P01033 Y_RNA.275-201ENST00000364726 110 ntBASIC0.75□□□□□ -2.29
TIMP1P01033 RNU1-36P-201ENST00000365130 165 ntBASIC0.75□□□□□ -2.29
TIMP1P01033 RNU6-1138P-201ENST00000365359 106 ntBASIC0.75□□□□□ -2.29
TIMP1P01033 RNU6-1160P-201ENST00000384546 104 ntBASIC0.75□□□□□ -2.29
TIMP1P01033 RNU6-713P-201ENST00000384761 107 ntBASIC0.75□□□□□ -2.29
TIMP1P01033 MIR200A-201ENST00000384875 90 ntBASIC0.75□□□□□ -2.29
TIMP1P01033 RNU2-64P-201ENST00000411315 191 ntBASIC0.75□□□□□ -2.29
TIMP1P01033 TRBVB-201ENST00000477100 408 ntBASIC0.75□□□□□ -2.29
TIMP1P01033 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.75□□□□□ -2.29
TIMP1P01033 ACA64.5-201ENST00000516207 127 ntBASIC0.75□□□□□ -2.29
TIMP1P01033 RNA5SP121-201ENST00000516537 101 ntBASIC0.75□□□□□ -2.29
TIMP1P01033 RNU7-149P-201ENST00000516739 59 ntBASIC0.75□□□□□ -2.29
TIMP1P01033 RNU11-2P-201ENST00000516898 142 ntBASIC0.75□□□□□ -2.29
TIMP1P01033 RNU6-570P-201ENST00000517051 105 ntBASIC0.75□□□□□ -2.29
TIMP1P01033 Y_RNA.720-201ENST00000517166 92 ntBASIC0.75□□□□□ -2.29
TIMP1P01033 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
TIMP1P01033 AC013244.2-201ENST00000603396 103 ntBASIC0.75□□□□□ -2.29
TIMP1P01033 Y_RNA.802-201ENST00000614892 130 ntBASIC0.75□□□□□ -2.29
TIMP1P01033 SEPT14P17-201ENST00000617978 177 ntBASIC0.75□□□□□ -2.29
TIMP1P01033 SNORA25.3-201ENST00000363205 127 ntBASIC0.74□□□□□ -2.29
TIMP1P01033 SNORD114-24-201ENST00000365029 72 ntBASIC0.74□□□□□ -2.29
TIMP1P01033 SNORA1.2-201ENST00000365189 134 ntBASIC0.74□□□□□ -2.29
TIMP1P01033 Y_RNA.370-201ENST00000365589 108 ntBASIC0.74□□□□□ -2.29
TIMP1P01033 RNU6-211P-201ENST00000384047 107 ntBASIC0.74□□□□□ -2.29
TIMP1P01033 RNU6-1289P-201ENST00000384431 106 ntBASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 243.5 ms