Protein–RNA interactions for Protein: O60635

TSPAN1, Tetraspanin-1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1O60635 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.1□□□□□ -2.23
TSPAN1O60635 RNU7-25P-201ENST00000516544 62 ntBASIC1.1□□□□□ -2.23
TSPAN1O60635 AC099654.10-201ENST00000640395 161 ntBASIC1.1□□□□□ -2.23
TSPAN1O60635 RNA5SP264-201ENST00000363115 107 ntBASIC1.09□□□□□ -2.23
TSPAN1O60635 Y_RNA.149-201ENST00000363558 117 ntBASIC1.09□□□□□ -2.23
TSPAN1O60635 Y_RNA.229-201ENST00000364347 113 ntBASIC1.09□□□□□ -2.23
TSPAN1O60635 Y_RNA.277-201ENST00000364754 102 ntBASIC1.09□□□□□ -2.23
TSPAN1O60635 Y_RNA.486-201ENST00000384398 107 ntBASIC1.09□□□□□ -2.23
TSPAN1O60635 SNORA8.3-201ENST00000384679 139 ntBASIC1.09□□□□□ -2.23
TSPAN1O60635 MIR520E-201ENST00000384867 87 ntBASIC1.09□□□□□ -2.23
TSPAN1O60635 MIR626-201ENST00000385032 94 ntBASIC1.09□□□□□ -2.23
TSPAN1O60635 MT-TT-201ENST00000387460 66 ntBASIC1.09□□□□□ -2.23
TSPAN1O60635 Y_RNA.590-201ENST00000410140 107 ntBASIC1.09□□□□□ -2.23
TSPAN1O60635 AC002429.1-201ENST00000437672 148 ntBASIC1.09□□□□□ -2.23
TSPAN1O60635 RPS29P28-201ENST00000446439 141 ntBASIC1.09□□□□□ -2.23
TSPAN1O60635 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.09□□□□□ -2.23
TSPAN1O60635 SNORD2.1-201ENST00000458762 69 ntBASIC1.09□□□□□ -2.23
TSPAN1O60635 RNU6-830P-201ENST00000516353 107 ntBASIC1.09□□□□□ -2.23
TSPAN1O60635 RNU7-43P-201ENST00000516554 64 ntBASIC1.09□□□□□ -2.23
TSPAN1O60635 RNU6-1007P-201ENST00000516586 107 ntBASIC1.09□□□□□ -2.23
TSPAN1O60635 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.09□□□□□ -2.23
TSPAN1O60635 AC008163.1-202ENST00000636004 2889 ntBASIC1.08□□□□□ -2.24
TSPAN1O60635 Y_RNA.54-201ENST00000362766 105 ntBASIC1.08□□□□□ -2.24
TSPAN1O60635 Y_RNA.116-201ENST00000363292 103 ntBASIC1.08□□□□□ -2.24
TSPAN1O60635 Y_RNA.133-201ENST00000363428 110 ntBASIC1.08□□□□□ -2.24
TSPAN1O60635 MIR1185-1-201ENST00000408598 86 ntBASIC1.08□□□□□ -2.24
TSPAN1O60635 RNU4-57P-201ENST00000515980 135 ntBASIC1.08□□□□□ -2.24
TSPAN1O60635 SNORD77.4-201ENST00000516158 81 ntBASIC1.08□□□□□ -2.24
TSPAN1O60635 Y_RNA.679-201ENST00000516416 91 ntBASIC1.08□□□□□ -2.24
TSPAN1O60635 RNU6-113P-201ENST00000516653 101 ntBASIC1.08□□□□□ -2.24
TSPAN1O60635 AC100767.1-201ENST00000528178 123 ntBASIC1.08□□□□□ -2.24
TSPAN1O60635 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.08□□□□□ -2.24
TSPAN1O60635 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.08□□□□□ -2.24
TSPAN1O60635 U6.104-201ENST00000637979 90 ntBASIC1.08□□□□□ -2.24
TSPAN1O60635 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
TSPAN1O60635 Y_RNA.122-201ENST00000363331 96 ntBASIC1.07□□□□□ -2.24
TSPAN1O60635 snoU2_19.4-201ENST00000364329 80 ntBASIC1.07□□□□□ -2.24
TSPAN1O60635 Y_RNA.416-201ENST00000384014 113 ntBASIC1.07□□□□□ -2.24
TSPAN1O60635 Y_RNA.547-201ENST00000384654 119 ntBASIC1.07□□□□□ -2.24
TSPAN1O60635 MIR548O-201ENST00000408583 114 ntBASIC1.07□□□□□ -2.24
TSPAN1O60635 RNU7-21P-201ENST00000459430 62 ntBASIC1.07□□□□□ -2.24
TSPAN1O60635 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.07□□□□□ -2.24
TSPAN1O60635 SCARNA8-201ENST00000515924 131 ntBASIC1.07□□□□□ -2.24
TSPAN1O60635 SNORD116-28-201ENST00000516123 91 ntBASIC1.07□□□□□ -2.24
TSPAN1O60635 RNU6-453P-201ENST00000516819 85 ntBASIC1.07□□□□□ -2.24
TSPAN1O60635 AP003716.2-201ENST00000528260 108 ntBASIC1.07□□□□□ -2.24
TSPAN1O60635 AC008133.2-201ENST00000624540 351 ntBASIC1.07□□□□□ -2.24
TSPAN1O60635 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
TSPAN1O60635 MIR103A2-201ENST00000362154 78 ntBASIC1.06□□□□□ -2.24
TSPAN1O60635 MIR373-201ENST00000362273 69 ntBASIC1.06□□□□□ -2.24
TSPAN1O60635 Y_RNA.82-201ENST00000363000 102 ntBASIC1.06□□□□□ -2.24
TSPAN1O60635 Y_RNA.92-201ENST00000363043 102 ntBASIC1.06□□□□□ -2.24
TSPAN1O60635 Y_RNA.235-201ENST00000364412 102 ntBASIC1.06□□□□□ -2.24
TSPAN1O60635 Y_RNA.306-201ENST00000365015 102 ntBASIC1.06□□□□□ -2.24
TSPAN1O60635 Y_RNA.312-201ENST00000365089 102 ntBASIC1.06□□□□□ -2.24
TSPAN1O60635 Y_RNA.322-201ENST00000365151 102 ntBASIC1.06□□□□□ -2.24
TSPAN1O60635 Y_RNA.330-201ENST00000365230 109 ntBASIC1.06□□□□□ -2.24
TSPAN1O60635 RNU6-1138P-201ENST00000365359 106 ntBASIC1.06□□□□□ -2.24
TSPAN1O60635 SNORA80D-201ENST00000384488 135 ntBASIC1.06□□□□□ -2.24
TSPAN1O60635 Y_RNA.518-201ENST00000384552 113 ntBASIC1.06□□□□□ -2.24
TSPAN1O60635 AC063976.4-201ENST00000421971 163 ntBASIC1.06□□□□□ -2.24
TSPAN1O60635 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.06□□□□□ -2.24
TSPAN1O60635 SNORD127-201ENST00000458892 86 ntBASIC1.06□□□□□ -2.24
TSPAN1O60635 Y_RNA.650-201ENST00000459002 102 ntBASIC1.06□□□□□ -2.24
TSPAN1O60635 Y_RNA.777-201ENST00000516982 102 ntBASIC1.06□□□□□ -2.24
TSPAN1O60635 AC007751.1-201ENST00000529260 376 ntBASIC1.06□□□□□ -2.24
TSPAN1O60635 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.06□□□□□ -2.24
TSPAN1O60635 Y_RNA.771-201ENST00000598668 102 ntBASIC1.06□□□□□ -2.24
TSPAN1O60635 AL365265.1-201ENST00000621045 234 ntBASIC1.06□□□□□ -2.24
TSPAN1O60635 Y_RNA.789-201ENST00000622480 102 ntBASIC1.06□□□□□ -2.24
TSPAN1O60635 MIR4251-201ENST00000635819 61 ntBASIC1.06□□□□□ -2.24
TSPAN1O60635 Y_RNA.76-201ENST00000362931 109 ntBASIC1.05□□□□□ -2.24
TSPAN1O60635 RNU6-1187P-201ENST00000364771 110 ntBASIC1.05□□□□□ -2.24
TSPAN1O60635 Y_RNA.494-201ENST00000384432 111 ntBASIC1.05□□□□□ -2.24
TSPAN1O60635 AL078595.1-201ENST00000404458 226 ntBASIC1.05□□□□□ -2.24
TSPAN1O60635 MIR1302-7-201ENST00000408841 72 ntBASIC1.05□□□□□ -2.24
TSPAN1O60635 MTCYBP9-201ENST00000431021 303 ntBASIC1.05□□□□□ -2.24
TSPAN1O60635 SNORD124-201ENST00000459577 104 ntBASIC1.05□□□□□ -2.24
TSPAN1O60635 RNU6-1045P-201ENST00000516321 107 ntBASIC1.05□□□□□ -2.24
TSPAN1O60635 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.05□□□□□ -2.24
TSPAN1O60635 MIR4282-201ENST00000583613 67 ntBASIC1.05□□□□□ -2.24
TSPAN1O60635 AL353621.2-201ENST00000605340 133 ntBASIC1.05□□□□□ -2.24
TSPAN1O60635 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.05□□□□□ -2.24
TSPAN1O60635 AC012676.2-201ENST00000619258 186 ntBASIC1.05□□□□□ -2.24
TSPAN1O60635 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.05□□□□□ -2.24
TSPAN1O60635 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
TSPAN1O60635 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
TSPAN1O60635 RNU1-124P-201ENST00000363861 145 ntBASIC1.04□□□□□ -2.24
TSPAN1O60635 MIR532-201ENST00000385025 91 ntBASIC1.04□□□□□ -2.24
TSPAN1O60635 Y_RNA.622-201ENST00000411091 108 ntBASIC1.04□□□□□ -2.24
TSPAN1O60635 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.04□□□□□ -2.24
TSPAN1O60635 RPS29P1-201ENST00000465274 159 ntBASIC1.04□□□□□ -2.24
TSPAN1O60635 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.04□□□□□ -2.24
TSPAN1O60635 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.03□□□□□ -2.24
TSPAN1O60635 Y_RNA.288-201ENST00000364854 92 ntBASIC1.03□□□□□ -2.24
TSPAN1O60635 Y_RNA.352-201ENST00000365439 102 ntBASIC1.03□□□□□ -2.24
TSPAN1O60635 Y_RNA.370-201ENST00000365589 108 ntBASIC1.03□□□□□ -2.24
TSPAN1O60635 SNORD61-201ENST00000384252 73 ntBASIC1.03□□□□□ -2.24
TSPAN1O60635 Y_RNA.477-201ENST00000384352 108 ntBASIC1.03□□□□□ -2.24
TSPAN1O60635 MIR19B1-201ENST00000384829 87 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 218.2 ms