Protein–RNA interactions for Protein: A6NCS4

NKX2-6, Homeobox protein Nkx-2.6, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-6A6NCS4 MIR2681-201ENST00000581814 105 ntBASIC0.73□□□□□ -2.29
NKX2-6A6NCS4 MIR103A2-201ENST00000362154 78 ntBASIC0.72□□□□□ -2.29
NKX2-6A6NCS4 Y_RNA.217-201ENST00000364214 105 ntBASIC0.72□□□□□ -2.29
NKX2-6A6NCS4 Y_RNA.276-201ENST00000364732 109 ntBASIC0.72□□□□□ -2.29
NKX2-6A6NCS4 Y_RNA.376-201ENST00000365638 108 ntBASIC0.72□□□□□ -2.29
NKX2-6A6NCS4 SNORD38C-201ENST00000384381 69 ntBASIC0.72□□□□□ -2.29
NKX2-6A6NCS4 SNORA80D-201ENST00000384488 135 ntBASIC0.72□□□□□ -2.29
NKX2-6A6NCS4 RNU6-1109P-201ENST00000391187 107 ntBASIC0.72□□□□□ -2.29
NKX2-6A6NCS4 RNU6-1203P-201ENST00000410703 110 ntBASIC0.72□□□□□ -2.29
NKX2-6A6NCS4 AL731563.1-201ENST00000442202 214 ntBASIC0.72□□□□□ -2.29
NKX2-6A6NCS4 Y_RNA.641-201ENST00000459414 105 ntBASIC0.72□□□□□ -2.29
NKX2-6A6NCS4 RNU6-635P-201ENST00000516651 102 ntBASIC0.72□□□□□ -2.29
NKX2-6A6NCS4 AC133485.1-201ENST00000567176 124 ntBASIC0.72□□□□□ -2.29
NKX2-6A6NCS4 AC138907.6-201ENST00000568401 126 ntBASIC0.72□□□□□ -2.29
NKX2-6A6NCS4 AC012433.1-201ENST00000588916 398 ntBASIC0.72□□□□□ -2.29
NKX2-6A6NCS4 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
NKX2-6A6NCS4 Pinc.1-201ENST00000616452 154 ntBASIC0.72□□□□□ -2.29
NKX2-6A6NCS4 Y_RNA.11-201ENST00000362375 109 ntBASIC0.71□□□□□ -2.3
NKX2-6A6NCS4 Y_RNA.24-201ENST00000362508 103 ntBASIC0.71□□□□□ -2.3
NKX2-6A6NCS4 Y_RNA.237-201ENST00000364439 102 ntBASIC0.71□□□□□ -2.3
NKX2-6A6NCS4 RNU6-1289P-201ENST00000384431 106 ntBASIC0.71□□□□□ -2.3
NKX2-6A6NCS4 MIR19B1-201ENST00000384829 87 ntBASIC0.71□□□□□ -2.3
NKX2-6A6NCS4 MIR146A-201ENST00000385201 99 ntBASIC0.71□□□□□ -2.3
NKX2-6A6NCS4 U8.17-201ENST00000391292 132 ntBASIC0.71□□□□□ -2.3
NKX2-6A6NCS4 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.71□□□□□ -2.3
NKX2-6A6NCS4 AC004941.2-201ENST00000427009 228 ntBASIC0.71□□□□□ -2.3
NKX2-6A6NCS4 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.71□□□□□ -2.3
NKX2-6A6NCS4 SERF1AP1-201ENST00000514575 187 ntBASIC0.71□□□□□ -2.3
NKX2-6A6NCS4 Y_RNA.666-201ENST00000516187 112 ntBASIC0.71□□□□□ -2.3
NKX2-6A6NCS4 RNU7-149P-201ENST00000516739 59 ntBASIC0.71□□□□□ -2.3
NKX2-6A6NCS4 AP003716.2-201ENST00000528260 108 ntBASIC0.71□□□□□ -2.3
NKX2-6A6NCS4 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.71□□□□□ -2.3
NKX2-6A6NCS4 AC013244.2-201ENST00000603396 103 ntBASIC0.71□□□□□ -2.3
NKX2-6A6NCS4 AC037487.3-201ENST00000606668 112 ntBASIC0.71□□□□□ -2.3
NKX2-6A6NCS4 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.71□□□□□ -2.3
NKX2-6A6NCS4 MIR367-201ENST00000362299 68 ntBASIC0.7□□□□□ -2.3
NKX2-6A6NCS4 RNU6-654P-201ENST00000364373 107 ntBASIC0.7□□□□□ -2.3
NKX2-6A6NCS4 RNU6-740P-201ENST00000364734 105 ntBASIC0.7□□□□□ -2.3
NKX2-6A6NCS4 Y_RNA.326-201ENST00000365176 113 ntBASIC0.7□□□□□ -2.3
NKX2-6A6NCS4 RNU6-211P-201ENST00000384047 107 ntBASIC0.7□□□□□ -2.3
NKX2-6A6NCS4 Y_RNA.494-201ENST00000384432 111 ntBASIC0.7□□□□□ -2.3
NKX2-6A6NCS4 MT-TW-201ENST00000387382 68 ntBASIC0.7□□□□□ -2.3
NKX2-6A6NCS4 MIR1302-7-201ENST00000408841 72 ntBASIC0.7□□□□□ -2.3
NKX2-6A6NCS4 RNA5SP95-201ENST00000410319 137 ntBASIC0.7□□□□□ -2.3
NKX2-6A6NCS4 RNU7-25P-201ENST00000516544 62 ntBASIC0.7□□□□□ -2.3
NKX2-6A6NCS4 RNU7-43P-201ENST00000516554 64 ntBASIC0.7□□□□□ -2.3
NKX2-6A6NCS4 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.7□□□□□ -2.3
NKX2-6A6NCS4 AP001282.2-201ENST00000616149 309 ntBASIC0.7□□□□□ -2.3
NKX2-6A6NCS4 AC007742.2-201ENST00000618226 398 ntBASIC0.7□□□□□ -2.3
NKX2-6A6NCS4 MIR6835-201ENST00000621552 64 ntBASIC0.7□□□□□ -2.3
NKX2-6A6NCS4 AC008133.2-201ENST00000624540 351 ntBASIC0.7□□□□□ -2.3
NKX2-6A6NCS4 MIR4251-201ENST00000635819 61 ntBASIC0.7□□□□□ -2.3
NKX2-6A6NCS4 Y_RNA.14-201ENST00000362415 103 ntBASIC0.69□□□□□ -2.3
NKX2-6A6NCS4 SNORD114-2-201ENST00000363953 78 ntBASIC0.69□□□□□ -2.3
NKX2-6A6NCS4 RNU6-694P-201ENST00000364071 147 ntBASIC0.69□□□□□ -2.3
NKX2-6A6NCS4 RNU6-144P-201ENST00000383951 107 ntBASIC0.69□□□□□ -2.3
NKX2-6A6NCS4 Y_RNA.483-201ENST00000384380 101 ntBASIC0.69□□□□□ -2.3
NKX2-6A6NCS4 Y_RNA.486-201ENST00000384398 107 ntBASIC0.69□□□□□ -2.3
NKX2-6A6NCS4 MIR508-201ENST00000384857 115 ntBASIC0.69□□□□□ -2.3
NKX2-6A6NCS4 SNORD12-201ENST00000391002 90 ntBASIC0.69□□□□□ -2.3
NKX2-6A6NCS4 Y_RNA.587-201ENST00000391210 103 ntBASIC0.69□□□□□ -2.3
NKX2-6A6NCS4 POLR2J4-204ENST00000418424 324 ntBASIC0.69□□□□□ -2.3
NKX2-6A6NCS4 TRBVB-201ENST00000477100 408 ntBASIC0.69□□□□□ -2.3
NKX2-6A6NCS4 RNU6-1143P-201ENST00000516125 104 ntBASIC0.69□□□□□ -2.3
NKX2-6A6NCS4 MIR4724-201ENST00000579485 89 ntBASIC0.69□□□□□ -2.3
NKX2-6A6NCS4 MIR4661-201ENST00000582720 75 ntBASIC0.69□□□□□ -2.3
NKX2-6A6NCS4 AC087685.1-201ENST00000587507 141 ntBASIC0.69□□□□□ -2.3
NKX2-6A6NCS4 AL021707.8-201ENST00000609428 183 ntBASIC0.69□□□□□ -2.3
NKX2-6A6NCS4 AC006441.5-201ENST00000612680 209 ntBASIC0.69□□□□□ -2.3
NKX2-6A6NCS4 uc_338.4-201ENST00000616635 176 ntBASIC0.69□□□□□ -2.3
NKX2-6A6NCS4 AL442644.1-201ENST00000454390 3105 ntBASIC0.69□□□□□ -2.3
NKX2-6A6NCS4 AC023934.1-201ENST00000574529 2389 ntBASIC0.68□□□□□ -2.3
NKX2-6A6NCS4 Y_RNA.547-201ENST00000384654 119 ntBASIC0.68□□□□□ -2.3
NKX2-6A6NCS4 MIR606-201ENST00000384851 96 ntBASIC0.68□□□□□ -2.3
NKX2-6A6NCS4 MIR942-201ENST00000401111 86 ntBASIC0.68□□□□□ -2.3
NKX2-6A6NCS4 RNU7-90P-201ENST00000459216 62 ntBASIC0.68□□□□□ -2.3
NKX2-6A6NCS4 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.68□□□□□ -2.3
NKX2-6A6NCS4 RNU4-57P-201ENST00000515980 135 ntBASIC0.68□□□□□ -2.3
NKX2-6A6NCS4 RNU6-351P-201ENST00000516097 100 ntBASIC0.68□□□□□ -2.3
NKX2-6A6NCS4 ACA64.5-201ENST00000516207 127 ntBASIC0.68□□□□□ -2.3
NKX2-6A6NCS4 Y_RNA.720-201ENST00000517166 92 ntBASIC0.68□□□□□ -2.3
NKX2-6A6NCS4 MIR548AO-201ENST00000579992 96 ntBASIC0.68□□□□□ -2.3
NKX2-6A6NCS4 AC131055.1-201ENST00000584626 316 ntBASIC0.68□□□□□ -2.3
NKX2-6A6NCS4 AC006006.1-201ENST00000603082 144 ntBASIC0.68□□□□□ -2.3
NKX2-6A6NCS4 RNU6-94P-201ENST00000607728 107 ntBASIC0.68□□□□□ -2.3
NKX2-6A6NCS4 SNORA63C-201ENST00000364578 129 ntBASIC0.67□□□□□ -2.3
NKX2-6A6NCS4 Y_RNA.275-201ENST00000364726 110 ntBASIC0.67□□□□□ -2.3
NKX2-6A6NCS4 Y_RNA.370-201ENST00000365589 108 ntBASIC0.67□□□□□ -2.3
NKX2-6A6NCS4 MIR15B-201ENST00000385045 98 ntBASIC0.67□□□□□ -2.3
NKX2-6A6NCS4 MT-TT-201ENST00000387460 66 ntBASIC0.67□□□□□ -2.3
NKX2-6A6NCS4 MIR548O-201ENST00000408583 114 ntBASIC0.67□□□□□ -2.3
NKX2-6A6NCS4 MTCO2P24-201ENST00000515611 426 ntBASIC0.67□□□□□ -2.3
NKX2-6A6NCS4 RNU6-830P-201ENST00000516353 107 ntBASIC0.67□□□□□ -2.3
NKX2-6A6NCS4 AC007751.1-201ENST00000529260 376 ntBASIC0.67□□□□□ -2.3
NKX2-6A6NCS4 AC109810.1-201ENST00000534066 224 ntBASIC0.67□□□□□ -2.3
NKX2-6A6NCS4 AC008737.2-201ENST00000599446 118 ntBASIC0.67□□□□□ -2.3
NKX2-6A6NCS4 MIR4791-201ENST00000607666 84 ntBASIC0.67□□□□□ -2.3
NKX2-6A6NCS4 SEPT14P17-201ENST00000617978 177 ntBASIC0.67□□□□□ -2.3
NKX2-6A6NCS4 MIR6513-201ENST00000621188 64 ntBASIC0.67□□□□□ -2.3
NKX2-6A6NCS4 MIR6516-201ENST00000630554 81 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 175.2 ms