Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 MIR548AR-201ENST00000582191 57 ntBASIC0.86□□□□□ -2.27
ATG4BQ9Y4P1 MIR6857-201ENST00000613267 93 ntBASIC0.86□□□□□ -2.27
ATG4BQ9Y4P1 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
ATG4BQ9Y4P1 Y_RNA.293-201ENST00000364908 93 ntBASIC0.85□□□□□ -2.27
ATG4BQ9Y4P1 MIR570-201ENST00000384917 97 ntBASIC0.85□□□□□ -2.27
ATG4BQ9Y4P1 AC023449.1-201ENST00000454464 154 ntBASIC0.85□□□□□ -2.27
ATG4BQ9Y4P1 Y_RNA.637-201ENST00000459424 114 ntBASIC0.85□□□□□ -2.27
ATG4BQ9Y4P1 AC091959.1-201ENST00000495857 238 ntBASIC0.85□□□□□ -2.27
ATG4BQ9Y4P1 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.85□□□□□ -2.27
ATG4BQ9Y4P1 Y_RNA.701-201ENST00000516812 110 ntBASIC0.85□□□□□ -2.27
ATG4BQ9Y4P1 RNU6-1137P-201ENST00000517073 99 ntBASIC0.85□□□□□ -2.27
ATG4BQ9Y4P1 AP003733.2-201ENST00000529409 171 ntBASIC0.85□□□□□ -2.27
ATG4BQ9Y4P1 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.85□□□□□ -2.27
ATG4BQ9Y4P1 AC023827.1-201ENST00000569247 97 ntBASIC0.85□□□□□ -2.27
ATG4BQ9Y4P1 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC0.85□□□□□ -2.27
ATG4BQ9Y4P1 Pinc.1-201ENST00000616452 154 ntBASIC0.85□□□□□ -2.27
ATG4BQ9Y4P1 AC013791.1-201ENST00000616619 62 ntBASIC0.85□□□□□ -2.27
ATG4BQ9Y4P1 AC008133.2-201ENST00000624540 351 ntBASIC0.85□□□□□ -2.27
ATG4BQ9Y4P1 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
ATG4BQ9Y4P1 MIR367-201ENST00000362299 68 ntBASIC0.84□□□□□ -2.27
ATG4BQ9Y4P1 Y_RNA.16-201ENST00000362421 102 ntBASIC0.84□□□□□ -2.27
ATG4BQ9Y4P1 RNU6-1272P-201ENST00000362776 107 ntBASIC0.84□□□□□ -2.27
ATG4BQ9Y4P1 Y_RNA.116-201ENST00000363292 103 ntBASIC0.84□□□□□ -2.27
ATG4BQ9Y4P1 Y_RNA.153-201ENST00000363615 91 ntBASIC0.84□□□□□ -2.27
ATG4BQ9Y4P1 RNU6-144P-201ENST00000383951 107 ntBASIC0.84□□□□□ -2.27
ATG4BQ9Y4P1 MIR1185-1-201ENST00000408598 86 ntBASIC0.84□□□□□ -2.27
ATG4BQ9Y4P1 FABP5P4-201ENST00000437203 171 ntBASIC0.84□□□□□ -2.27
ATG4BQ9Y4P1 MTND4LP30-201ENST00000454092 297 ntBASIC0.84□□□□□ -2.27
ATG4BQ9Y4P1 RN7SKP164-201ENST00000516138 266 ntBASIC0.84□□□□□ -2.27
ATG4BQ9Y4P1 RNU6-1153P-201ENST00000516760 105 ntBASIC0.84□□□□□ -2.27
ATG4BQ9Y4P1 RNU7-181P-201ENST00000517234 74 ntBASIC0.84□□□□□ -2.27
ATG4BQ9Y4P1 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.84□□□□□ -2.27
ATG4BQ9Y4P1 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.84□□□□□ -2.27
ATG4BQ9Y4P1 MIR4251-201ENST00000635819 61 ntBASIC0.84□□□□□ -2.27
ATG4BQ9Y4P1 MIR373-201ENST00000362273 69 ntBASIC0.83□□□□□ -2.28
ATG4BQ9Y4P1 Y_RNA.14-201ENST00000362415 103 ntBASIC0.83□□□□□ -2.28
ATG4BQ9Y4P1 RNU6-326P-201ENST00000365480 107 ntBASIC0.83□□□□□ -2.28
ATG4BQ9Y4P1 MIR518E-201ENST00000385252 88 ntBASIC0.83□□□□□ -2.28
ATG4BQ9Y4P1 U8.17-201ENST00000391292 132 ntBASIC0.83□□□□□ -2.28
ATG4BQ9Y4P1 AL603910.2-201ENST00000407268 136 ntBASIC0.83□□□□□ -2.28
ATG4BQ9Y4P1 SNRPGP14-201ENST00000435400 219 ntBASIC0.83□□□□□ -2.28
ATG4BQ9Y4P1 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.83□□□□□ -2.28
ATG4BQ9Y4P1 MTND5P22-201ENST00000458380 195 ntBASIC0.83□□□□□ -2.28
ATG4BQ9Y4P1 RPL39P28-201ENST00000465655 155 ntBASIC0.83□□□□□ -2.28
ATG4BQ9Y4P1 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.83□□□□□ -2.28
ATG4BQ9Y4P1 PDCD5P2-201ENST00000507570 312 ntBASIC0.83□□□□□ -2.28
ATG4BQ9Y4P1 RNU6-1143P-201ENST00000516125 104 ntBASIC0.83□□□□□ -2.28
ATG4BQ9Y4P1 RNU11-2P-201ENST00000516898 142 ntBASIC0.83□□□□□ -2.28
ATG4BQ9Y4P1 SCARNA24.2-201ENST00000516968 130 ntBASIC0.83□□□□□ -2.28
ATG4BQ9Y4P1 MIR5692C2-201ENST00000577959 77 ntBASIC0.83□□□□□ -2.28
ATG4BQ9Y4P1 MIR3973-201ENST00000579824 107 ntBASIC0.83□□□□□ -2.28
ATG4BQ9Y4P1 AL049861.1-201ENST00000603130 150 ntBASIC0.83□□□□□ -2.28
ATG4BQ9Y4P1 AC211469.2-201ENST00000605461 205 ntBASIC0.83□□□□□ -2.28
ATG4BQ9Y4P1 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.82□□□□□ -2.28
ATG4BQ9Y4P1 Y_RNA.122-201ENST00000363331 96 ntBASIC0.82□□□□□ -2.28
ATG4BQ9Y4P1 Y_RNA.276-201ENST00000364732 109 ntBASIC0.82□□□□□ -2.28
ATG4BQ9Y4P1 SNORA33.2-201ENST00000365413 134 ntBASIC0.82□□□□□ -2.28
ATG4BQ9Y4P1 RNU6-639P-201ENST00000384074 107 ntBASIC0.82□□□□□ -2.28
ATG4BQ9Y4P1 RPS29P1-201ENST00000465274 159 ntBASIC0.82□□□□□ -2.28
ATG4BQ9Y4P1 MIR4698-201ENST00000577795 80 ntBASIC0.82□□□□□ -2.28
ATG4BQ9Y4P1 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.82□□□□□ -2.28
ATG4BQ9Y4P1 AC044792.1-201ENST00000593294 196 ntBASIC0.82□□□□□ -2.28
ATG4BQ9Y4P1 SEPT14P17-201ENST00000617978 177 ntBASIC0.82□□□□□ -2.28
ATG4BQ9Y4P1 Y_RNA.242-201ENST00000364473 110 ntBASIC0.81□□□□□ -2.28
ATG4BQ9Y4P1 RNU2-64P-201ENST00000411315 191 ntBASIC0.81□□□□□ -2.28
ATG4BQ9Y4P1 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.81□□□□□ -2.28
ATG4BQ9Y4P1 RNU6-570P-201ENST00000517051 105 ntBASIC0.81□□□□□ -2.28
ATG4BQ9Y4P1 MIR4724-201ENST00000579485 89 ntBASIC0.81□□□□□ -2.28
ATG4BQ9Y4P1 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.81□□□□□ -2.28
ATG4BQ9Y4P1 FAM71BP1-201ENST00000604431 523 ntBASIC0.81□□□□□ -2.28
ATG4BQ9Y4P1 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.81□□□□□ -2.28
ATG4BQ9Y4P1 AC068700.1-201ENST00000565862 3754 ntBASIC0.81□□□□□ -2.28
ATG4BQ9Y4P1 Y_RNA.84-201ENST00000363011 104 ntBASIC0.8□□□□□ -2.28
ATG4BQ9Y4P1 RNU4-10P-201ENST00000364383 140 ntBASIC0.8□□□□□ -2.28
ATG4BQ9Y4P1 Y_RNA.508-201ENST00000384502 114 ntBASIC0.8□□□□□ -2.28
ATG4BQ9Y4P1 RNU6-1067P-201ENST00000384752 107 ntBASIC0.8□□□□□ -2.28
ATG4BQ9Y4P1 RNU6-985P-201ENST00000410182 104 ntBASIC0.8□□□□□ -2.28
ATG4BQ9Y4P1 ACA64.5-201ENST00000516207 127 ntBASIC0.8□□□□□ -2.28
ATG4BQ9Y4P1 RNU6-830P-201ENST00000516353 107 ntBASIC0.8□□□□□ -2.28
ATG4BQ9Y4P1 RNA5SP255-201ENST00000516370 107 ntBASIC0.8□□□□□ -2.28
ATG4BQ9Y4P1 SNORA27.4-201ENST00000516650 95 ntBASIC0.8□□□□□ -2.28
ATG4BQ9Y4P1 RNU7-149P-201ENST00000516739 59 ntBASIC0.8□□□□□ -2.28
ATG4BQ9Y4P1 AC012433.1-201ENST00000588916 398 ntBASIC0.8□□□□□ -2.28
ATG4BQ9Y4P1 AL078603.1-201ENST00000603824 313 ntBASIC0.8□□□□□ -2.28
ATG4BQ9Y4P1 AC006441.5-201ENST00000612680 209 ntBASIC0.8□□□□□ -2.28
ATG4BQ9Y4P1 uc_338.4-201ENST00000616635 176 ntBASIC0.8□□□□□ -2.28
ATG4BQ9Y4P1 Y_RNA.370-201ENST00000365589 108 ntBASIC0.79□□□□□ -2.28
ATG4BQ9Y4P1 SNORA51.10-201ENST00000384418 136 ntBASIC0.79□□□□□ -2.28
ATG4BQ9Y4P1 MIR608-201ENST00000384820 100 ntBASIC0.79□□□□□ -2.28
ATG4BQ9Y4P1 MTCYBP6-201ENST00000441810 138 ntBASIC0.79□□□□□ -2.28
ATG4BQ9Y4P1 AL731563.1-201ENST00000442202 214 ntBASIC0.79□□□□□ -2.28
ATG4BQ9Y4P1 RNU7-25P-201ENST00000516544 62 ntBASIC0.79□□□□□ -2.28
ATG4BQ9Y4P1 AC109810.1-201ENST00000534066 224 ntBASIC0.79□□□□□ -2.28
ATG4BQ9Y4P1 SNORA4-201ENST00000584302 138 ntBASIC0.79□□□□□ -2.28
ATG4BQ9Y4P1 AC131055.1-201ENST00000584626 316 ntBASIC0.79□□□□□ -2.28
ATG4BQ9Y4P1 MIR4653-201ENST00000585107 83 ntBASIC0.79□□□□□ -2.28
ATG4BQ9Y4P1 AL008718.3-201ENST00000610217 321 ntBASIC0.79□□□□□ -2.28
ATG4BQ9Y4P1 AC022140.2-201ENST00000623500 188 ntBASIC0.79□□□□□ -2.28
ATG4BQ9Y4P1 snoU18.1-201ENST00000629629 71 ntBASIC0.79□□□□□ -2.28
ATG4BQ9Y4P1 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 280.3 ms