Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 MIR300-201ENST00000401138 83 ntBASIC1.6□□□□□ -2.15
NOTCH3Q9UM47 RPL30P14-201ENST00000482744 348 ntBASIC1.6□□□□□ -2.15
NOTCH3Q9UM47 RNU6-928P-201ENST00000516876 104 ntBASIC1.6□□□□□ -2.15
NOTCH3Q9UM47 MIR4666B-201ENST00000578142 81 ntBASIC1.6□□□□□ -2.15
NOTCH3Q9UM47 MIR6073-201ENST00000352083 89 ntBASIC1.6□□□□□ -2.15
NOTCH3Q9UM47 Y_RNA.73-201ENST00000362910 113 ntBASIC1.6□□□□□ -2.15
NOTCH3Q9UM47 RNU1-22P-201ENST00000363334 158 ntBASIC1.6□□□□□ -2.15
NOTCH3Q9UM47 Y_RNA.191-201ENST00000363972 113 ntBASIC1.6□□□□□ -2.15
NOTCH3Q9UM47 RNA5SP456-201ENST00000364002 114 ntBASIC1.6□□□□□ -2.15
NOTCH3Q9UM47 RNU6-944P-201ENST00000364023 107 ntBASIC1.6□□□□□ -2.15
NOTCH3Q9UM47 RNU6-1240P-201ENST00000365155 104 ntBASIC1.6□□□□□ -2.15
NOTCH3Q9UM47 SNORA4.2-201ENST00000365313 147 ntBASIC1.6□□□□□ -2.15
NOTCH3Q9UM47 Y_RNA.507-201ENST00000384500 99 ntBASIC1.6□□□□□ -2.15
NOTCH3Q9UM47 MIR1294-201ENST00000408503 142 ntBASIC1.6□□□□□ -2.15
NOTCH3Q9UM47 HMGN2P21-201ENST00000447764 270 ntBASIC1.6□□□□□ -2.15
NOTCH3Q9UM47 RNU1-131P-201ENST00000458943 161 ntBASIC1.6□□□□□ -2.15
NOTCH3Q9UM47 NDUFA4P2-201ENST00000489989 244 ntBASIC1.6□□□□□ -2.15
NOTCH3Q9UM47 Y_RNA.666-201ENST00000516187 112 ntBASIC1.6□□□□□ -2.15
NOTCH3Q9UM47 AC068339.1-201ENST00000526965 141 ntBASIC1.6□□□□□ -2.15
NOTCH3Q9UM47 AC004486.1-201ENST00000546846 233 ntBASIC1.6□□□□□ -2.15
NOTCH3Q9UM47 Y_RNA.68-201ENST00000362881 102 ntBASIC1.59□□□□□ -2.15
NOTCH3Q9UM47 RNU6-1209P-201ENST00000363655 107 ntBASIC1.59□□□□□ -2.15
NOTCH3Q9UM47 Y_RNA.290-201ENST00000364879 114 ntBASIC1.59□□□□□ -2.15
NOTCH3Q9UM47 Y_RNA.299-201ENST00000364973 94 ntBASIC1.59□□□□□ -2.15
NOTCH3Q9UM47 SNORD61-201ENST00000384252 73 ntBASIC1.59□□□□□ -2.15
NOTCH3Q9UM47 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.59□□□□□ -2.15
NOTCH3Q9UM47 AC139453.2-201ENST00000487255 133 ntBASIC1.59□□□□□ -2.15
NOTCH3Q9UM47 AC010598.1-201ENST00000510378 103 ntBASIC1.59□□□□□ -2.15
NOTCH3Q9UM47 SNORA4.4-201ENST00000515921 135 ntBASIC1.59□□□□□ -2.15
NOTCH3Q9UM47 RNU6-1149P-201ENST00000516810 97 ntBASIC1.59□□□□□ -2.15
NOTCH3Q9UM47 AC008739.2-201ENST00000597006 317 ntBASIC1.59□□□□□ -2.15
NOTCH3Q9UM47 Y_RNA.17-201ENST00000362433 111 ntBASIC1.58□□□□□ -2.16
NOTCH3Q9UM47 RNU6-743P-201ENST00000364151 106 ntBASIC1.58□□□□□ -2.16
NOTCH3Q9UM47 Y_RNA.224-201ENST00000364308 111 ntBASIC1.58□□□□□ -2.16
NOTCH3Q9UM47 SNORD31B-201ENST00000364977 69 ntBASIC1.58□□□□□ -2.16
NOTCH3Q9UM47 AC092427.1-202ENST00000430569 476 ntBASIC1.58□□□□□ -2.16
NOTCH3Q9UM47 AL445646.1-201ENST00000431784 216 ntBASIC1.58□□□□□ -2.16
NOTCH3Q9UM47 RNU6-1291P-201ENST00000516591 104 ntBASIC1.58□□□□□ -2.16
NOTCH3Q9UM47 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.58□□□□□ -2.16
NOTCH3Q9UM47 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
NOTCH3Q9UM47 AC005336.3-201ENST00000623833 2679 ntBASIC1.58□□□□□ -2.16
NOTCH3Q9UM47 RNU6-600P-201ENST00000362524 99 ntBASIC1.58□□□□□ -2.16
NOTCH3Q9UM47 Y_RNA.190-201ENST00000363964 101 ntBASIC1.58□□□□□ -2.16
NOTCH3Q9UM47 MIR577-201ENST00000385196 96 ntBASIC1.58□□□□□ -2.16
NOTCH3Q9UM47 AL133475.1-201ENST00000404414 305 ntBASIC1.58□□□□□ -2.16
NOTCH3Q9UM47 AL445687.1-201ENST00000439946 251 ntBASIC1.58□□□□□ -2.16
NOTCH3Q9UM47 RNA5SP57-201ENST00000459463 123 ntBASIC1.58□□□□□ -2.16
NOTCH3Q9UM47 RNU7-171P-201ENST00000459581 62 ntBASIC1.58□□□□□ -2.16
NOTCH3Q9UM47 RNU7-172P-201ENST00000517125 64 ntBASIC1.58□□□□□ -2.16
NOTCH3Q9UM47 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.58□□□□□ -2.16
NOTCH3Q9UM47 AC022217.4-201ENST00000604389 163 ntBASIC1.58□□□□□ -2.16
NOTCH3Q9UM47 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.58□□□□□ -2.16
NOTCH3Q9UM47 MIR6504-201ENST00000613520 61 ntBASIC1.58□□□□□ -2.16
NOTCH3Q9UM47 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.58□□□□□ -2.16
NOTCH3Q9UM47 AC073308.1-201ENST00000623696 305 ntBASIC1.58□□□□□ -2.16
NOTCH3Q9UM47 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.58□□□□□ -2.16
NOTCH3Q9UM47 Y_RNA.253-201ENST00000364562 112 ntBASIC1.57□□□□□ -2.16
NOTCH3Q9UM47 RNU1-138P-201ENST00000384093 164 ntBASIC1.57□□□□□ -2.16
NOTCH3Q9UM47 Y_RNA.454-201ENST00000384224 113 ntBASIC1.57□□□□□ -2.16
NOTCH3Q9UM47 Y_RNA.531-201ENST00000384589 121 ntBASIC1.57□□□□□ -2.16
NOTCH3Q9UM47 MIR607-201ENST00000385241 96 ntBASIC1.57□□□□□ -2.16
NOTCH3Q9UM47 RNA5SP239-201ENST00000410218 129 ntBASIC1.57□□□□□ -2.16
NOTCH3Q9UM47 Y_RNA.601-201ENST00000410500 113 ntBASIC1.57□□□□□ -2.16
NOTCH3Q9UM47 AC099677.2-201ENST00000436385 175 ntBASIC1.57□□□□□ -2.16
NOTCH3Q9UM47 MIR5197-201ENST00000583721 112 ntBASIC1.57□□□□□ -2.16
NOTCH3Q9UM47 AC091152.3-201ENST00000604227 325 ntBASIC1.57□□□□□ -2.16
NOTCH3Q9UM47 AC002064.3-201ENST00000623448 346 ntBASIC1.57□□□□□ -2.16
NOTCH3Q9UM47 U6.98-201ENST00000637157 84 ntBASIC1.57□□□□□ -2.16
NOTCH3Q9UM47 RNU6-1189P-201ENST00000383958 107 ntBASIC1.57□□□□□ -2.16
NOTCH3Q9UM47 RNU6-675P-201ENST00000384236 104 ntBASIC1.57□□□□□ -2.16
NOTCH3Q9UM47 AC023141.4-201ENST00000412031 328 ntBASIC1.57□□□□□ -2.16
NOTCH3Q9UM47 SCARNA23-201ENST00000516060 130 ntBASIC1.57□□□□□ -2.16
NOTCH3Q9UM47 RNA5SP200-201ENST00000516360 103 ntBASIC1.57□□□□□ -2.16
NOTCH3Q9UM47 AC019288.1-201ENST00000557918 224 ntBASIC1.57□□□□□ -2.16
NOTCH3Q9UM47 MIR3690-201ENST00000580266 75 ntBASIC1.57□□□□□ -2.16
NOTCH3Q9UM47 MIR4452-201ENST00000583004 71 ntBASIC1.57□□□□□ -2.16
NOTCH3Q9UM47 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.57□□□□□ -2.16
NOTCH3Q9UM47 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC1.57□□□□□ -2.16
NOTCH3Q9UM47 HDX-206ENST00000506585 6158 ntTSL 2 BASIC1.57□□□□□ -2.16
NOTCH3Q9UM47 AL355596.1-201ENST00000565399 3996 ntBASIC1.56□□□□□ -2.16
NOTCH3Q9UM47 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
NOTCH3Q9UM47 Y_RNA.242-201ENST00000364473 110 ntBASIC1.56□□□□□ -2.16
NOTCH3Q9UM47 RNU6-234P-201ENST00000365229 104 ntBASIC1.56□□□□□ -2.16
NOTCH3Q9UM47 RNU6-198P-201ENST00000384258 104 ntBASIC1.56□□□□□ -2.16
NOTCH3Q9UM47 MIR548D2-201ENST00000384955 97 ntBASIC1.56□□□□□ -2.16
NOTCH3Q9UM47 MIR9-3-201ENST00000385084 90 ntBASIC1.56□□□□□ -2.16
NOTCH3Q9UM47 MIR147B-201ENST00000390185 80 ntBASIC1.56□□□□□ -2.16
NOTCH3Q9UM47 RNU2-49P-201ENST00000410666 184 ntBASIC1.56□□□□□ -2.16
NOTCH3Q9UM47 TRIAP1P1-201ENST00000427062 225 ntBASIC1.56□□□□□ -2.16
NOTCH3Q9UM47 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.56□□□□□ -2.16
NOTCH3Q9UM47 RNU7-14P-201ENST00000459331 62 ntBASIC1.56□□□□□ -2.16
NOTCH3Q9UM47 AP000873.1-201ENST00000463987 400 ntBASIC1.56□□□□□ -2.16
NOTCH3Q9UM47 TRMT112P2-201ENST00000512910 132 ntBASIC1.56□□□□□ -2.16
NOTCH3Q9UM47 RNU6-965P-201ENST00000516721 96 ntBASIC1.56□□□□□ -2.16
NOTCH3Q9UM47 AC022523.2-201ENST00000561045 150 ntBASIC1.56□□□□□ -2.16
NOTCH3Q9UM47 MIR4305-201ENST00000583252 102 ntBASIC1.56□□□□□ -2.16
NOTCH3Q9UM47 AC007229.1-201ENST00000590455 412 ntBASIC1.56□□□□□ -2.16
NOTCH3Q9UM47 AC006160.2-201ENST00000637708 154 ntBASIC1.56□□□□□ -2.16
NOTCH3Q9UM47 ZNF720P1-201ENST00000562403 1939 ntBASIC1.56□□□□□ -2.16
NOTCH3Q9UM47 Y_RNA.437-201ENST00000384113 113 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 305.2 ms