Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 AC022254.1-201ENST00000567857 235 ntBASIC1.88□□□□□ -2.11
RLIMQ9NVW2 AC104984.5-201ENST00000586878 94 ntBASIC1.88□□□□□ -2.11
RLIMQ9NVW2 Y_RNA.783-201ENST00000613546 102 ntBASIC1.88□□□□□ -2.11
RLIMQ9NVW2 MIR6715A-201ENST00000615929 79 ntBASIC1.88□□□□□ -2.11
RLIMQ9NVW2 RNU6-1123P-201ENST00000362347 106 ntBASIC1.87□□□□□ -2.11
RLIMQ9NVW2 RNU6-661P-201ENST00000362409 107 ntBASIC1.87□□□□□ -2.11
RLIMQ9NVW2 RNU6-888P-201ENST00000363010 101 ntBASIC1.87□□□□□ -2.11
RLIMQ9NVW2 RNU6-457P-201ENST00000363999 107 ntBASIC1.87□□□□□ -2.11
RLIMQ9NVW2 RNU6-1082P-201ENST00000364574 107 ntBASIC1.87□□□□□ -2.11
RLIMQ9NVW2 SNORD24-201ENST00000383884 75 ntBASIC1.87□□□□□ -2.11
RLIMQ9NVW2 SNORA1-201ENST00000384107 130 ntBASIC1.87□□□□□ -2.11
RLIMQ9NVW2 RNU6-746P-201ENST00000384112 109 ntBASIC1.87□□□□□ -2.11
RLIMQ9NVW2 MIR452-201ENST00000385020 85 ntBASIC1.87□□□□□ -2.11
RLIMQ9NVW2 RNA5SP508-201ENST00000411327 119 ntBASIC1.87□□□□□ -2.11
RLIMQ9NVW2 AL356320.1-201ENST00000429616 163 ntBASIC1.87□□□□□ -2.11
RLIMQ9NVW2 JTBP1-201ENST00000441314 247 ntBASIC1.87□□□□□ -2.11
RLIMQ9NVW2 SNORA18.4-201ENST00000516440 124 ntBASIC1.87□□□□□ -2.11
RLIMQ9NVW2 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.87□□□□□ -2.11
RLIMQ9NVW2 AC090142.3-201ENST00000519012 385 ntBASIC1.87□□□□□ -2.11
RLIMQ9NVW2 AC112693.2-201ENST00000556538 232 ntBASIC1.87□□□□□ -2.11
RLIMQ9NVW2 MIR4435-1-201ENST00000582552 80 ntBASIC1.87□□□□□ -2.11
RLIMQ9NVW2 MIR3935-201ENST00000583472 104 ntBASIC1.87□□□□□ -2.11
RLIMQ9NVW2 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
RLIMQ9NVW2 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
RLIMQ9NVW2 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.86□□□□□ -2.11
RLIMQ9NVW2 Y_RNA.215-201ENST00000364204 112 ntBASIC1.86□□□□□ -2.11
RLIMQ9NVW2 RNU6-597P-201ENST00000365620 102 ntBASIC1.86□□□□□ -2.11
RLIMQ9NVW2 Y_RNA.488-201ENST00000384403 102 ntBASIC1.86□□□□□ -2.11
RLIMQ9NVW2 Y_RNA.547-201ENST00000384654 119 ntBASIC1.86□□□□□ -2.11
RLIMQ9NVW2 MIR548A2-201ENST00000384956 97 ntBASIC1.86□□□□□ -2.11
RLIMQ9NVW2 MIR518F-201ENST00000384973 87 ntBASIC1.86□□□□□ -2.11
RLIMQ9NVW2 SNORA75.5-201ENST00000391291 81 ntBASIC1.86□□□□□ -2.11
RLIMQ9NVW2 SNORA3.2-201ENST00000408221 125 ntBASIC1.86□□□□□ -2.11
RLIMQ9NVW2 AC004965.1-201ENST00000413033 213 ntBASIC1.86□□□□□ -2.11
RLIMQ9NVW2 HMGN2P38-201ENST00000423806 265 ntBASIC1.86□□□□□ -2.11
RLIMQ9NVW2 RPL23AP42-201ENST00000471152 471 ntBASIC1.86□□□□□ -2.11
RLIMQ9NVW2 MIR4448-201ENST00000584360 86 ntBASIC1.86□□□□□ -2.11
RLIMQ9NVW2 SNRPGP19-201ENST00000603826 189 ntBASIC1.86□□□□□ -2.11
RLIMQ9NVW2 MIR8074-201ENST00000615081 81 ntBASIC1.86□□□□□ -2.11
RLIMQ9NVW2 AL359851.1-201ENST00000569460 4997 ntBASIC1.86□□□□□ -2.11
RLIMQ9NVW2 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
RLIMQ9NVW2 MIR513A1-201ENST00000385138 129 ntBASIC1.85□□□□□ -2.11
RLIMQ9NVW2 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.85□□□□□ -2.11
RLIMQ9NVW2 AL445646.1-201ENST00000431784 216 ntBASIC1.85□□□□□ -2.11
RLIMQ9NVW2 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.85□□□□□ -2.11
RLIMQ9NVW2 RNA5SP272-201ENST00000516095 111 ntBASIC1.85□□□□□ -2.11
RLIMQ9NVW2 RNA5SP364-201ENST00000516938 78 ntBASIC1.85□□□□□ -2.11
RLIMQ9NVW2 MIR1273D-201ENST00000577266 86 ntBASIC1.85□□□□□ -2.11
RLIMQ9NVW2 MIR3646-201ENST00000578301 84 ntBASIC1.85□□□□□ -2.11
RLIMQ9NVW2 MIR548X2-201ENST00000579776 100 ntBASIC1.85□□□□□ -2.11
RLIMQ9NVW2 MIR5089-201ENST00000580047 84 ntBASIC1.85□□□□□ -2.11
RLIMQ9NVW2 FAM106DP-201ENST00000586416 501 ntBASIC1.85□□□□□ -2.11
RLIMQ9NVW2 MIR8063-201ENST00000621930 81 ntBASIC1.85□□□□□ -2.11
RLIMQ9NVW2 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.85□□□□□ -2.11
RLIMQ9NVW2 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
RLIMQ9NVW2 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
RLIMQ9NVW2 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
RLIMQ9NVW2 SNORD115-28-201ENST00000363931 81 ntBASIC1.84□□□□□ -2.11
RLIMQ9NVW2 RNY1P5-201ENST00000383890 115 ntBASIC1.84□□□□□ -2.11
RLIMQ9NVW2 SNORA20-201ENST00000384662 132 ntBASIC1.84□□□□□ -2.11
RLIMQ9NVW2 MIR526A1-201ENST00000384897 85 ntBASIC1.84□□□□□ -2.11
RLIMQ9NVW2 MIR136-201ENST00000385207 82 ntBASIC1.84□□□□□ -2.11
RLIMQ9NVW2 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
RLIMQ9NVW2 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
RLIMQ9NVW2 SUMO2P12-201ENST00000405924 140 ntBASIC1.84□□□□□ -2.11
RLIMQ9NVW2 MIR1261-201ENST00000408659 82 ntBASIC1.84□□□□□ -2.11
RLIMQ9NVW2 AF228730.3-201ENST00000436691 102 ntBASIC1.84□□□□□ -2.11
RLIMQ9NVW2 AL627230.6-201ENST00000611129 280 ntBASIC1.84□□□□□ -2.11
RLIMQ9NVW2 AL590808.1-201ENST00000618696 141 ntBASIC1.84□□□□□ -2.11
RLIMQ9NVW2 AC064859.1-201ENST00000624741 174 ntBASIC1.84□□□□□ -2.11
RLIMQ9NVW2 Y_RNA.343-201ENST00000365354 112 ntBASIC1.83□□□□□ -2.12
RLIMQ9NVW2 MIR194-1-201ENST00000384892 85 ntBASIC1.83□□□□□ -2.12
RLIMQ9NVW2 RN7SKP223-201ENST00000410582 62 ntBASIC1.83□□□□□ -2.12
RLIMQ9NVW2 RNA5SP127-201ENST00000411051 133 ntBASIC1.83□□□□□ -2.12
RLIMQ9NVW2 AL356379.1-201ENST00000414105 126 ntBASIC1.83□□□□□ -2.12
RLIMQ9NVW2 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
RLIMQ9NVW2 RNU6-426P-201ENST00000516464 97 ntBASIC1.83□□□□□ -2.12
RLIMQ9NVW2 RNU7-181P-201ENST00000517234 74 ntBASIC1.83□□□□□ -2.12
RLIMQ9NVW2 MIR219B-201ENST00000637023 88 ntBASIC1.83□□□□□ -2.12
RLIMQ9NVW2 RNA5SP425-201ENST00000410336 112 ntBASIC1.82□□□□□ -2.12
RLIMQ9NVW2 AC005908.1-201ENST00000468701 347 ntBASIC1.82□□□□□ -2.12
RLIMQ9NVW2 SNORA18.7-201ENST00000516910 131 ntBASIC1.82□□□□□ -2.12
RLIMQ9NVW2 AL365205.2-201ENST00000594586 68 ntBASIC1.82□□□□□ -2.12
RLIMQ9NVW2 AC103810.8-201ENST00000607347 118 ntBASIC1.82□□□□□ -2.12
RLIMQ9NVW2 AC134878.1-201ENST00000619901 243 ntBASIC1.82□□□□□ -2.12
RLIMQ9NVW2 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.82□□□□□ -2.12
RLIMQ9NVW2 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.82□□□□□ -2.12
RLIMQ9NVW2 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
RLIMQ9NVW2 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
RLIMQ9NVW2 RNA5SP432-201ENST00000362480 116 ntBASIC1.81□□□□□ -2.12
RLIMQ9NVW2 Y_RNA.37-201ENST00000362606 108 ntBASIC1.81□□□□□ -2.12
RLIMQ9NVW2 RNY1P11-201ENST00000363759 113 ntBASIC1.81□□□□□ -2.12
RLIMQ9NVW2 Y_RNA.542-201ENST00000384641 111 ntBASIC1.81□□□□□ -2.12
RLIMQ9NVW2 MIR569-201ENST00000385228 96 ntBASIC1.81□□□□□ -2.12
RLIMQ9NVW2 SNORD77.3-201ENST00000391113 65 ntBASIC1.81□□□□□ -2.12
RLIMQ9NVW2 RNU6-460P-201ENST00000391158 108 ntBASIC1.81□□□□□ -2.12
RLIMQ9NVW2 RNA5SP489-201ENST00000410986 109 ntBASIC1.81□□□□□ -2.12
RLIMQ9NVW2 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.81□□□□□ -2.12
RLIMQ9NVW2 HMGN2P23-201ENST00000456759 269 ntBASIC1.81□□□□□ -2.12
RLIMQ9NVW2 RN7SL274P-201ENST00000492268 272 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 302.9 ms