Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.36□□□□□ -2.19
SIX2Q9NPC8 Y_RNA.121-201ENST00000363309 113 ntBASIC1.36□□□□□ -2.19
SIX2Q9NPC8 RNU6-1020P-201ENST00000363684 107 ntBASIC1.36□□□□□ -2.19
SIX2Q9NPC8 SNORD14E-201ENST00000364009 85 ntBASIC1.36□□□□□ -2.19
SIX2Q9NPC8 Y_RNA.238-201ENST00000364441 102 ntBASIC1.36□□□□□ -2.19
SIX2Q9NPC8 Y_RNA.435-201ENST00000384095 112 ntBASIC1.36□□□□□ -2.19
SIX2Q9NPC8 RNY3P5-201ENST00000384127 102 ntBASIC1.36□□□□□ -2.19
SIX2Q9NPC8 Y_RNA.571-201ENST00000384753 98 ntBASIC1.36□□□□□ -2.19
SIX2Q9NPC8 MIR513A1-201ENST00000385138 129 ntBASIC1.36□□□□□ -2.19
SIX2Q9NPC8 RNU6-1228P-201ENST00000391014 107 ntBASIC1.36□□□□□ -2.19
SIX2Q9NPC8 AL606845.1-201ENST00000404881 255 ntBASIC1.36□□□□□ -2.19
SIX2Q9NPC8 HMGN2P32-201ENST00000444648 269 ntBASIC1.36□□□□□ -2.19
SIX2Q9NPC8 AC093850.1-201ENST00000454121 251 ntBASIC1.36□□□□□ -2.19
SIX2Q9NPC8 RNU7-149P-201ENST00000516739 59 ntBASIC1.36□□□□□ -2.19
SIX2Q9NPC8 Y_RNA.700-201ENST00000516806 100 ntBASIC1.36□□□□□ -2.19
SIX2Q9NPC8 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.36□□□□□ -2.19
SIX2Q9NPC8 AC015688.6-201ENST00000577737 104 ntBASIC1.36□□□□□ -2.19
SIX2Q9NPC8 MIR3198-2-201ENST00000577868 80 ntBASIC1.36□□□□□ -2.19
SIX2Q9NPC8 MIR4421-201ENST00000578133 69 ntBASIC1.36□□□□□ -2.19
SIX2Q9NPC8 RNU2-4P-201ENST00000606190 192 ntBASIC1.36□□□□□ -2.19
SIX2Q9NPC8 Y_RNA.336-201ENST00000365307 109 ntBASIC1.35□□□□□ -2.19
SIX2Q9NPC8 AC108667.1-201ENST00000428618 249 ntBASIC1.35□□□□□ -2.19
SIX2Q9NPC8 SNRPGP14-201ENST00000435400 219 ntBASIC1.35□□□□□ -2.19
SIX2Q9NPC8 AL138752.1-201ENST00000452964 351 ntBASIC1.35□□□□□ -2.19
SIX2Q9NPC8 SUMO2P16-201ENST00000519475 264 ntBASIC1.35□□□□□ -2.19
SIX2Q9NPC8 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.35□□□□□ -2.19
SIX2Q9NPC8 MIR4744-201ENST00000581563 82 ntBASIC1.35□□□□□ -2.19
SIX2Q9NPC8 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.35□□□□□ -2.19
SIX2Q9NPC8 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.35□□□□□ -2.19
SIX2Q9NPC8 ICE2P2-201ENST00000483823 2787 ntBASIC1.35□□□□□ -2.19
SIX2Q9NPC8 MIR302D-201ENST00000362275 68 ntBASIC1.34□□□□□ -2.19
SIX2Q9NPC8 Y_RNA.242-201ENST00000364473 110 ntBASIC1.34□□□□□ -2.19
SIX2Q9NPC8 RNU6-442P-201ENST00000383968 104 ntBASIC1.34□□□□□ -2.19
SIX2Q9NPC8 Y_RNA.785-201ENST00000384290 109 ntBASIC1.34□□□□□ -2.19
SIX2Q9NPC8 RNU4-70P-201ENST00000384579 139 ntBASIC1.34□□□□□ -2.19
SIX2Q9NPC8 RNU2-55P-201ENST00000411146 174 ntBASIC1.34□□□□□ -2.19
SIX2Q9NPC8 AC015922.2-201ENST00000435593 184 ntBASIC1.34□□□□□ -2.19
SIX2Q9NPC8 snoU13.9-201ENST00000458927 103 ntBASIC1.34□□□□□ -2.19
SIX2Q9NPC8 AC108210.2-201ENST00000503681 201 ntBASIC1.34□□□□□ -2.19
SIX2Q9NPC8 AC008834.1-201ENST00000511612 175 ntBASIC1.34□□□□□ -2.19
SIX2Q9NPC8 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.34□□□□□ -2.19
SIX2Q9NPC8 MIR4662B-201ENST00000579498 81 ntBASIC1.34□□□□□ -2.19
SIX2Q9NPC8 AC108706.1-201ENST00000611053 297 ntBASIC1.34□□□□□ -2.19
SIX2Q9NPC8 Pinc.1-201ENST00000616452 154 ntBASIC1.34□□□□□ -2.19
SIX2Q9NPC8 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.34□□□□□ -2.19
SIX2Q9NPC8 AL442644.1-201ENST00000454390 3105 ntBASIC1.33□□□□□ -2.2
SIX2Q9NPC8 Y_RNA.29-201ENST00000362570 113 ntBASIC1.33□□□□□ -2.2
SIX2Q9NPC8 RNU6-199P-201ENST00000362954 107 ntBASIC1.33□□□□□ -2.2
SIX2Q9NPC8 RNA5SP259-201ENST00000365541 109 ntBASIC1.33□□□□□ -2.2
SIX2Q9NPC8 RNU6-484P-201ENST00000384016 107 ntBASIC1.33□□□□□ -2.2
SIX2Q9NPC8 MIR802-201ENST00000390235 94 ntBASIC1.33□□□□□ -2.2
SIX2Q9NPC8 RNU6-578P-201ENST00000390980 103 ntBASIC1.33□□□□□ -2.2
SIX2Q9NPC8 Y_RNA.793-201ENST00000411222 111 ntBASIC1.33□□□□□ -2.2
SIX2Q9NPC8 RNU1-92P-201ENST00000517017 135 ntBASIC1.33□□□□□ -2.2
SIX2Q9NPC8 SNORA81.3-201ENST00000517283 198 ntBASIC1.33□□□□□ -2.2
SIX2Q9NPC8 MIR3124-201ENST00000582636 67 ntBASIC1.33□□□□□ -2.2
SIX2Q9NPC8 AC106754.2-201ENST00000623006 233 ntBASIC1.33□□□□□ -2.2
SIX2Q9NPC8 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.32□□□□□ -2.2
SIX2Q9NPC8 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.32□□□□□ -2.2
SIX2Q9NPC8 SNORD45.3-201ENST00000363836 72 ntBASIC1.32□□□□□ -2.2
SIX2Q9NPC8 Y_RNA.182-201ENST00000363880 111 ntBASIC1.32□□□□□ -2.2
SIX2Q9NPC8 RNA5SP99-201ENST00000364020 114 ntBASIC1.32□□□□□ -2.2
SIX2Q9NPC8 Y_RNA.233-201ENST00000364407 101 ntBASIC1.32□□□□□ -2.2
SIX2Q9NPC8 MIR526A1-201ENST00000384897 85 ntBASIC1.32□□□□□ -2.2
SIX2Q9NPC8 MIR452-201ENST00000385020 85 ntBASIC1.32□□□□□ -2.2
SIX2Q9NPC8 Y_RNA.622-201ENST00000411091 108 ntBASIC1.32□□□□□ -2.2
SIX2Q9NPC8 MTND5P15-201ENST00000434246 349 ntBASIC1.32□□□□□ -2.2
SIX2Q9NPC8 HSPE1P24-201ENST00000450782 238 ntBASIC1.32□□□□□ -2.2
SIX2Q9NPC8 SNRPGP8-201ENST00000454064 226 ntBASIC1.32□□□□□ -2.2
SIX2Q9NPC8 Y_RNA.797-201ENST00000515977 94 ntBASIC1.32□□□□□ -2.2
SIX2Q9NPC8 RNU6-561P-201ENST00000516222 102 ntBASIC1.32□□□□□ -2.2
SIX2Q9NPC8 AC022559.1-201ENST00000520905 205 ntBASIC1.32□□□□□ -2.2
SIX2Q9NPC8 AC109810.1-201ENST00000534066 224 ntBASIC1.32□□□□□ -2.2
SIX2Q9NPC8 AP002392.1-201ENST00000537692 208 ntBASIC1.32□□□□□ -2.2
SIX2Q9NPC8 AL512598.1-201ENST00000610158 273 ntBASIC1.32□□□□□ -2.2
SIX2Q9NPC8 MIR8063-201ENST00000621930 81 ntBASIC1.32□□□□□ -2.2
SIX2Q9NPC8 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
SIX2Q9NPC8 Y_RNA.75-201ENST00000362927 97 ntBASIC1.31□□□□□ -2.2
SIX2Q9NPC8 RNU6-268P-201ENST00000364174 107 ntBASIC1.31□□□□□ -2.2
SIX2Q9NPC8 SNORD1A-201ENST00000364968 72 ntBASIC1.31□□□□□ -2.2
SIX2Q9NPC8 RNU6-728P-201ENST00000365375 104 ntBASIC1.31□□□□□ -2.2
SIX2Q9NPC8 Y_RNA.412-201ENST00000384001 104 ntBASIC1.31□□□□□ -2.2
SIX2Q9NPC8 Y_RNA.432-201ENST00000384087 111 ntBASIC1.31□□□□□ -2.2
SIX2Q9NPC8 Y_RNA.486-201ENST00000384398 107 ntBASIC1.31□□□□□ -2.2
SIX2Q9NPC8 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.31□□□□□ -2.2
SIX2Q9NPC8 RNU7-120P-201ENST00000459334 63 ntBASIC1.31□□□□□ -2.2
SIX2Q9NPC8 AC092991.1-201ENST00000477176 376 ntBASIC1.31□□□□□ -2.2
SIX2Q9NPC8 RNU6-917P-201ENST00000516294 104 ntBASIC1.31□□□□□ -2.2
SIX2Q9NPC8 RNU6-1299P-201ENST00000516316 100 ntBASIC1.31□□□□□ -2.2
SIX2Q9NPC8 RNU6-126P-201ENST00000516685 103 ntBASIC1.31□□□□□ -2.2
SIX2Q9NPC8 AC090142.3-201ENST00000519012 385 ntBASIC1.31□□□□□ -2.2
SIX2Q9NPC8 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.31□□□□□ -2.2
SIX2Q9NPC8 AC072026.1-201ENST00000605023 201 ntBASIC1.31□□□□□ -2.2
SIX2Q9NPC8 AC006441.5-201ENST00000612680 209 ntBASIC1.31□□□□□ -2.2
SIX2Q9NPC8 AC004792.1-201ENST00000614523 137 ntBASIC1.31□□□□□ -2.2
SIX2Q9NPC8 U6.106-201ENST00000636360 105 ntBASIC1.31□□□□□ -2.2
SIX2Q9NPC8 RNU6-275P-201ENST00000364910 107 ntBASIC1.3□□□□□ -2.2
SIX2Q9NPC8 MIR653-201ENST00000385279 96 ntBASIC1.3□□□□□ -2.2
SIX2Q9NPC8 MIR934-201ENST00000401241 83 ntBASIC1.3□□□□□ -2.2
SIX2Q9NPC8 RNU4-43P-201ENST00000410628 137 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 186 ms