Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 MIR517B-201ENST00000385102 67 ntBASIC-0.31□□□□□ -2.46
TTC28Q96AY4 AL365184.2-201ENST00000431139 435 ntBASIC-0.31□□□□□ -2.46
TTC28Q96AY4 ERLEC1P1-201ENST00000433806 578 ntBASIC-0.31□□□□□ -2.46
TTC28Q96AY4 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC-0.31□□□□□ -2.46
TTC28Q96AY4 RNU7-129P-201ENST00000516128 62 ntBASIC-0.31□□□□□ -2.46
TTC28Q96AY4 Vault.3-201ENST00000516676 95 ntBASIC-0.31□□□□□ -2.46
TTC28Q96AY4 snoU83B.1-201ENST00000517136 88 ntBASIC-0.31□□□□□ -2.46
TTC28Q96AY4 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-0.31□□□□□ -2.46
TTC28Q96AY4 MIR4263-201ENST00000584745 83 ntBASIC-0.31□□□□□ -2.46
TTC28Q96AY4 AC006380.1-201ENST00000603598 186 ntBASIC-0.31□□□□□ -2.46
TTC28Q96AY4 AC006566.1-201ENST00000608943 513 ntBASIC-0.31□□□□□ -2.46
TTC28Q96AY4 RNU6-1034P-201ENST00000365335 101 ntBASIC-0.32□□□□□ -2.46
TTC28Q96AY4 Y_RNA.527-201ENST00000384573 102 ntBASIC-0.32□□□□□ -2.46
TTC28Q96AY4 MT-TN-201ENST00000387400 73 ntBASIC-0.32□□□□□ -2.46
TTC28Q96AY4 RNU6-757P-201ENST00000410334 100 ntBASIC-0.32□□□□□ -2.46
TTC28Q96AY4 RNU6-195P-201ENST00000411352 109 ntBASIC-0.32□□□□□ -2.46
TTC28Q96AY4 AL359672.1-201ENST00000442302 409 ntBASIC-0.32□□□□□ -2.46
TTC28Q96AY4 MRPS10P1-201ENST00000448483 130 ntBASIC-0.32□□□□□ -2.46
TTC28Q96AY4 SUMO1P2-201ENST00000452524 304 ntBASIC-0.32□□□□□ -2.46
TTC28Q96AY4 SNRPGP8-201ENST00000454064 226 ntBASIC-0.32□□□□□ -2.46
TTC28Q96AY4 RNU7-62P-201ENST00000458856 62 ntBASIC-0.32□□□□□ -2.46
TTC28Q96AY4 AL133173.2-201ENST00000614270 90 ntBASIC-0.32□□□□□ -2.46
TTC28Q96AY4 AC010205.1-201ENST00000616668 449 ntBASIC-0.32□□□□□ -2.46
TTC28Q96AY4 AC009248.2-201ENST00000619826 254 ntBASIC-0.32□□□□□ -2.46
TTC28Q96AY4 AC022306.3-201ENST00000619930 550 ntBASIC-0.32□□□□□ -2.46
TTC28Q96AY4 AL607023.1-201ENST00000620045 248 ntBASIC-0.32□□□□□ -2.46
TTC28Q96AY4 RNU4-92P-201ENST00000363783 136 ntBASIC-0.32□□□□□ -2.46
TTC28Q96AY4 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.32□□□□□ -2.46
TTC28Q96AY4 snoU2-30.1-201ENST00000365012 70 ntBASIC-0.32□□□□□ -2.46
TTC28Q96AY4 MIR522-201ENST00000385071 87 ntBASIC-0.32□□□□□ -2.46
TTC28Q96AY4 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC-0.32□□□□□ -2.46
TTC28Q96AY4 AL358934.1-201ENST00000432346 324 ntBASIC-0.32□□□□□ -2.46
TTC28Q96AY4 AC104850.1-201ENST00000435940 476 ntBASIC-0.32□□□□□ -2.46
TTC28Q96AY4 AL137792.2-201ENST00000443484 235 ntBASIC-0.32□□□□□ -2.46
TTC28Q96AY4 MIR18B-201ENST00000454574 71 ntBASIC-0.32□□□□□ -2.46
TTC28Q96AY4 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC-0.32□□□□□ -2.46
TTC28Q96AY4 AC046134.1-201ENST00000514454 666 ntBASIC-0.32□□□□□ -2.46
TTC28Q96AY4 MIR5706-201ENST00000579841 80 ntBASIC-0.32□□□□□ -2.46
TTC28Q96AY4 AL353803.5-201ENST00000599815 141 ntBASIC-0.32□□□□□ -2.46
TTC28Q96AY4 AC005828.6-201ENST00000606610 232 ntBASIC-0.32□□□□□ -2.46
TTC28Q96AY4 SNORD114-7-201ENST00000362520 77 ntBASIC-0.33□□□□□ -2.46
TTC28Q96AY4 Y_RNA.123-201ENST00000363338 102 ntBASIC-0.33□□□□□ -2.46
TTC28Q96AY4 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.33□□□□□ -2.46
TTC28Q96AY4 RNU6-933P-201ENST00000384424 107 ntBASIC-0.33□□□□□ -2.46
TTC28Q96AY4 Y_RNA.519-201ENST00000384553 102 ntBASIC-0.33□□□□□ -2.46
TTC28Q96AY4 RNU6-906P-201ENST00000384700 70 ntBASIC-0.33□□□□□ -2.46
TTC28Q96AY4 MIR125B2-201ENST00000385128 89 ntBASIC-0.33□□□□□ -2.46
TTC28Q96AY4 AC092447.3-201ENST00000426027 686 ntBASIC-0.33□□□□□ -2.46
TTC28Q96AY4 MTCO2P11-201ENST00000431069 680 ntBASIC-0.33□□□□□ -2.46
TTC28Q96AY4 SNRPGP14-201ENST00000435400 219 ntBASIC-0.33□□□□□ -2.46
TTC28Q96AY4 AC009961.2-201ENST00000435771 251 ntBASIC-0.33□□□□□ -2.46
TTC28Q96AY4 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC-0.33□□□□□ -2.46
TTC28Q96AY4 AL136370.1-201ENST00000608166 691 ntBASIC-0.33□□□□□ -2.46
TTC28Q96AY4 U2.17-201ENST00000611454 95 ntBASIC-0.33□□□□□ -2.46
TTC28Q96AY4 AC133104.2-201ENST00000615272 193 ntBASIC-0.33□□□□□ -2.46
TTC28Q96AY4 Y_RNA.781-201ENST00000620301 103 ntBASIC-0.33□□□□□ -2.46
TTC28Q96AY4 AL162726.3-218ENST00000636401 95 ntBASIC-0.33□□□□□ -2.46
TTC28Q96AY4 Y_RNA.8-201ENST00000362353 102 ntBASIC-0.33□□□□□ -2.46
TTC28Q96AY4 SNORD115-15-201ENST00000364809 81 ntBASIC-0.33□□□□□ -2.46
TTC28Q96AY4 RNU5E-5P-201ENST00000365379 116 ntBASIC-0.33□□□□□ -2.46
TTC28Q96AY4 RNU6-606P-201ENST00000384721 111 ntBASIC-0.33□□□□□ -2.46
TTC28Q96AY4 RNU4-83P-201ENST00000410863 133 ntBASIC-0.33□□□□□ -2.46
TTC28Q96AY4 RPL30P16-201ENST00000419341 429 ntBASIC-0.33□□□□□ -2.46
TTC28Q96AY4 MTCO2P16-201ENST00000436962 677 ntBASIC-0.33□□□□□ -2.46
TTC28Q96AY4 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-0.33□□□□□ -2.46
TTC28Q96AY4 AC069271.1-201ENST00000445577 156 ntBASIC-0.33□□□□□ -2.46
TTC28Q96AY4 SNORD45.4-201ENST00000516629 73 ntBASIC-0.33□□□□□ -2.46
TTC28Q96AY4 AC090616.2-202ENST00000584248 222 ntBASIC-0.33□□□□□ -2.46
TTC28Q96AY4 MIR4791-201ENST00000607666 84 ntBASIC-0.33□□□□□ -2.46
TTC28Q96AY4 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.33□□□□□ -2.46
TTC28Q96AY4 MIR6874-201ENST00000635894 71 ntBASIC-0.33□□□□□ -2.46
TTC28Q96AY4 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC-0.33□□□□□ -2.46
TTC28Q96AY4 Y_RNA.376-201ENST00000365638 108 ntBASIC-0.34□□□□□ -2.46
TTC28Q96AY4 RNU6-811P-201ENST00000384069 107 ntBASIC-0.34□□□□□ -2.46
TTC28Q96AY4 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.34□□□□□ -2.46
TTC28Q96AY4 Y_RNA.478-201ENST00000384358 107 ntBASIC-0.34□□□□□ -2.46
TTC28Q96AY4 RNU6-517P-201ENST00000384362 110 ntBASIC-0.34□□□□□ -2.46
TTC28Q96AY4 Y_RNA.537-201ENST00000384626 109 ntBASIC-0.34□□□□□ -2.46
TTC28Q96AY4 MIR802-201ENST00000390235 94 ntBASIC-0.34□□□□□ -2.46
TTC28Q96AY4 AC073415.1-201ENST00000449240 153 ntBASIC-0.34□□□□□ -2.46
TTC28Q96AY4 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC-0.34□□□□□ -2.46
TTC28Q96AY4 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-0.35□□□□□ -2.46
TTC28Q96AY4 Y_RNA.91-201ENST00000363042 107 ntBASIC-0.35□□□□□ -2.46
TTC28Q96AY4 Y_RNA.420-201ENST00000384043 110 ntBASIC-0.35□□□□□ -2.46
TTC28Q96AY4 RNU6-136P-201ENST00000384663 107 ntBASIC-0.35□□□□□ -2.46
TTC28Q96AY4 MIR521-1-201ENST00000384902 87 ntBASIC-0.35□□□□□ -2.46
TTC28Q96AY4 RPL39P25-201ENST00000449384 154 ntBASIC-0.35□□□□□ -2.46
TTC28Q96AY4 ZNF736P8Y-201ENST00000451913 669 ntBASIC-0.35□□□□□ -2.46
TTC28Q96AY4 GMFBP1-201ENST00000467831 427 ntBASIC-0.35□□□□□ -2.46
TTC28Q96AY4 RNU6-180P-201ENST00000516697 61 ntBASIC-0.35□□□□□ -2.46
TTC28Q96AY4 RNU6-881P-201ENST00000516813 102 ntBASIC-0.35□□□□□ -2.46
TTC28Q96AY4 Y_RNA.721-201ENST00000517207 102 ntBASIC-0.35□□□□□ -2.46
TTC28Q96AY4 RNA5SP169-201ENST00000517268 117 ntBASIC-0.35□□□□□ -2.46
TTC28Q96AY4 MTND4P7-201ENST00000523876 130 ntBASIC-0.35□□□□□ -2.46
TTC28Q96AY4 YWHAEP3-201ENST00000582767 121 ntBASIC-0.35□□□□□ -2.46
TTC28Q96AY4 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC-0.35□□□□□ -2.46
TTC28Q96AY4 AC006927.3-201ENST00000638789 384 ntBASIC-0.35□□□□□ -2.46
TTC28Q96AY4 RNU6-1242P-201ENST00000391052 103 ntBASIC-0.35□□□□□ -2.47
TTC28Q96AY4 RNU6-602P-201ENST00000411155 105 ntBASIC-0.35□□□□□ -2.47
TTC28Q96AY4 RNU2-72P-201ENST00000411175 163 ntBASIC-0.35□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms