Protein–RNA interactions for Protein: Q15915

ZIC1, Zinc finger protein ZIC 1, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC1Q15915 RNA5SP48-201ENST00000363969 126 ntBASIC0.83□□□□□ -2.28
ZIC1Q15915 SNORD28B-201ENST00000390993 75 ntBASIC0.83□□□□□ -2.28
ZIC1Q15915 SNORD72-201ENST00000390994 80 ntBASIC0.83□□□□□ -2.28
ZIC1Q15915 AL603910.2-201ENST00000407268 136 ntBASIC0.83□□□□□ -2.28
ZIC1Q15915 MIR1185-1-201ENST00000408598 86 ntBASIC0.83□□□□□ -2.28
ZIC1Q15915 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.83□□□□□ -2.28
ZIC1Q15915 RNU7-90P-201ENST00000459216 62 ntBASIC0.83□□□□□ -2.28
ZIC1Q15915 RNU6-830P-201ENST00000516353 107 ntBASIC0.83□□□□□ -2.28
ZIC1Q15915 RNU6-1137P-201ENST00000517073 99 ntBASIC0.83□□□□□ -2.28
ZIC1Q15915 AP003733.2-201ENST00000529409 171 ntBASIC0.83□□□□□ -2.28
ZIC1Q15915 MIR548AR-201ENST00000582191 57 ntBASIC0.83□□□□□ -2.28
ZIC1Q15915 MIR4661-201ENST00000582720 75 ntBASIC0.83□□□□□ -2.28
ZIC1Q15915 Pinc.1-201ENST00000616452 154 ntBASIC0.83□□□□□ -2.28
ZIC1Q15915 AC013791.1-201ENST00000616619 62 ntBASIC0.83□□□□□ -2.28
ZIC1Q15915 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.82□□□□□ -2.28
ZIC1Q15915 AC068700.1-201ENST00000565862 3754 ntBASIC0.82□□□□□ -2.28
ZIC1Q15915 RNU6-1272P-201ENST00000362776 107 ntBASIC0.82□□□□□ -2.28
ZIC1Q15915 Y_RNA.64-201ENST00000362845 102 ntBASIC0.82□□□□□ -2.28
ZIC1Q15915 Y_RNA.116-201ENST00000363292 103 ntBASIC0.82□□□□□ -2.28
ZIC1Q15915 Y_RNA.153-201ENST00000363615 91 ntBASIC0.82□□□□□ -2.28
ZIC1Q15915 RNU6-1187P-201ENST00000364771 110 ntBASIC0.82□□□□□ -2.28
ZIC1Q15915 SNORA33.2-201ENST00000365413 134 ntBASIC0.82□□□□□ -2.28
ZIC1Q15915 RNU6-639P-201ENST00000384074 107 ntBASIC0.82□□□□□ -2.28
ZIC1Q15915 BTF3P11-201ENST00000426582 477 ntBASIC0.82□□□□□ -2.28
ZIC1Q15915 AC005534.2-201ENST00000431047 433 ntBASIC0.82□□□□□ -2.28
ZIC1Q15915 MTCYBP6-201ENST00000441810 138 ntBASIC0.82□□□□□ -2.28
ZIC1Q15915 AC091959.1-201ENST00000495857 238 ntBASIC0.82□□□□□ -2.28
ZIC1Q15915 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.82□□□□□ -2.28
ZIC1Q15915 RN7SKP164-201ENST00000516138 266 ntBASIC0.82□□□□□ -2.28
ZIC1Q15915 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.82□□□□□ -2.28
ZIC1Q15915 AC008133.2-201ENST00000624540 351 ntBASIC0.82□□□□□ -2.28
ZIC1Q15915 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.82□□□□□ -2.28
ZIC1Q15915 Y_RNA.14-201ENST00000362415 103 ntBASIC0.81□□□□□ -2.28
ZIC1Q15915 SNORD114-24-201ENST00000365029 72 ntBASIC0.81□□□□□ -2.28
ZIC1Q15915 MIR200A-201ENST00000384875 90 ntBASIC0.81□□□□□ -2.28
ZIC1Q15915 RNU6-985P-201ENST00000410182 104 ntBASIC0.81□□□□□ -2.28
ZIC1Q15915 RNU6-383P-201ENST00000410864 94 ntBASIC0.81□□□□□ -2.28
ZIC1Q15915 AL731563.1-201ENST00000442202 214 ntBASIC0.81□□□□□ -2.28
ZIC1Q15915 MIR5692C2-201ENST00000577959 77 ntBASIC0.81□□□□□ -2.28
ZIC1Q15915 MIR367-201ENST00000362299 68 ntBASIC0.8□□□□□ -2.28
ZIC1Q15915 Y_RNA.16-201ENST00000362421 102 ntBASIC0.8□□□□□ -2.28
ZIC1Q15915 Y_RNA.330-201ENST00000365230 109 ntBASIC0.8□□□□□ -2.28
ZIC1Q15915 RNU6-1227P-201ENST00000383981 107 ntBASIC0.8□□□□□ -2.28
ZIC1Q15915 RNU6-662P-201ENST00000384253 104 ntBASIC0.8□□□□□ -2.28
ZIC1Q15915 RNU6-1067P-201ENST00000384752 107 ntBASIC0.8□□□□□ -2.28
ZIC1Q15915 RNA5SP496-201ENST00000391240 109 ntBASIC0.8□□□□□ -2.28
ZIC1Q15915 MIR548J-201ENST00000408833 112 ntBASIC0.8□□□□□ -2.28
ZIC1Q15915 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.8□□□□□ -2.28
ZIC1Q15915 SNORA27.4-201ENST00000516650 95 ntBASIC0.8□□□□□ -2.28
ZIC1Q15915 MIR4724-201ENST00000579485 89 ntBASIC0.8□□□□□ -2.28
ZIC1Q15915 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.8□□□□□ -2.28
ZIC1Q15915 SNORA4-201ENST00000584302 138 ntBASIC0.8□□□□□ -2.28
ZIC1Q15915 AL020996.3-201ENST00000606617 222 ntBASIC0.8□□□□□ -2.28
ZIC1Q15915 AC006441.5-201ENST00000612680 209 ntBASIC0.8□□□□□ -2.28
ZIC1Q15915 SEPT14P17-201ENST00000617978 177 ntBASIC0.8□□□□□ -2.28
ZIC1Q15915 AC015726.2-201ENST00000620112 122 ntBASIC0.8□□□□□ -2.28
ZIC1Q15915 MIR4251-201ENST00000635819 61 ntBASIC0.8□□□□□ -2.28
ZIC1Q15915 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
ZIC1Q15915 Y_RNA.84-201ENST00000363011 104 ntBASIC0.79□□□□□ -2.28
ZIC1Q15915 Y_RNA.293-201ENST00000364908 93 ntBASIC0.79□□□□□ -2.28
ZIC1Q15915 U8.17-201ENST00000391292 132 ntBASIC0.79□□□□□ -2.28
ZIC1Q15915 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.79□□□□□ -2.28
ZIC1Q15915 AC113618.1-201ENST00000416747 285 ntBASIC0.79□□□□□ -2.28
ZIC1Q15915 RNU6-351P-201ENST00000516097 100 ntBASIC0.79□□□□□ -2.28
ZIC1Q15915 DEFB108E-201ENST00000524692 240 ntBASIC0.79□□□□□ -2.28
ZIC1Q15915 AL021707.8-201ENST00000609428 183 ntBASIC0.79□□□□□ -2.28
ZIC1Q15915 MIR6788-201ENST00000618842 66 ntBASIC0.79□□□□□ -2.28
ZIC1Q15915 AC022140.2-201ENST00000623500 188 ntBASIC0.79□□□□□ -2.28
ZIC1Q15915 Y_RNA.217-201ENST00000364214 105 ntBASIC0.78□□□□□ -2.28
ZIC1Q15915 SNORA1.2-201ENST00000365189 134 ntBASIC0.78□□□□□ -2.28
ZIC1Q15915 MIR570-201ENST00000384917 97 ntBASIC0.78□□□□□ -2.28
ZIC1Q15915 MIR942-201ENST00000401111 86 ntBASIC0.78□□□□□ -2.28
ZIC1Q15915 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.78□□□□□ -2.28
ZIC1Q15915 POLR2J4-204ENST00000418424 324 ntBASIC0.78□□□□□ -2.28
ZIC1Q15915 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.78□□□□□ -2.28
ZIC1Q15915 MTND5P22-201ENST00000458380 195 ntBASIC0.78□□□□□ -2.28
ZIC1Q15915 Y_RNA.641-201ENST00000459414 105 ntBASIC0.78□□□□□ -2.28
ZIC1Q15915 PDCD5P2-201ENST00000507570 312 ntBASIC0.78□□□□□ -2.28
ZIC1Q15915 SERF1AP1-201ENST00000514575 187 ntBASIC0.78□□□□□ -2.28
ZIC1Q15915 RNU6-1153P-201ENST00000516760 105 ntBASIC0.78□□□□□ -2.28
ZIC1Q15915 RNU7-181P-201ENST00000517234 74 ntBASIC0.78□□□□□ -2.28
ZIC1Q15915 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.78□□□□□ -2.28
ZIC1Q15915 AC131055.1-201ENST00000584626 316 ntBASIC0.78□□□□□ -2.28
ZIC1Q15915 uc_338.4-201ENST00000616635 176 ntBASIC0.78□□□□□ -2.28
ZIC1Q15915 SNORD114-2-201ENST00000363953 78 ntBASIC0.77□□□□□ -2.29
ZIC1Q15915 Y_RNA.355-201ENST00000365462 98 ntBASIC0.77□□□□□ -2.29
ZIC1Q15915 MIR1302-7-201ENST00000408841 72 ntBASIC0.77□□□□□ -2.29
ZIC1Q15915 RNU7-149P-201ENST00000516739 59 ntBASIC0.77□□□□□ -2.29
ZIC1Q15915 RNU11-2P-201ENST00000516898 142 ntBASIC0.77□□□□□ -2.29
ZIC1Q15915 SCARNA24.2-201ENST00000516968 130 ntBASIC0.77□□□□□ -2.29
ZIC1Q15915 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.77□□□□□ -2.29
ZIC1Q15915 CYP3A137P-201ENST00000562436 69 ntBASIC0.77□□□□□ -2.29
ZIC1Q15915 AC023827.1-201ENST00000569247 97 ntBASIC0.77□□□□□ -2.29
ZIC1Q15915 AL049861.1-201ENST00000603130 150 ntBASIC0.77□□□□□ -2.29
ZIC1Q15915 AL008718.3-201ENST00000610217 321 ntBASIC0.77□□□□□ -2.29
ZIC1Q15915 snoU18.1-201ENST00000629629 71 ntBASIC0.77□□□□□ -2.29
ZIC1Q15915 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
ZIC1Q15915 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
ZIC1Q15915 UBE2WP1-201ENST00000362030 340 ntBASIC0.76□□□□□ -2.29
ZIC1Q15915 Y_RNA.370-201ENST00000365589 108 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 305.4 ms