Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 AC138907.6-201ENST00000568401 126 ntBASIC0.56□□□□□ -2.32
RAB40BQ12829 AL590095.2-201ENST00000604136 117 ntBASIC0.56□□□□□ -2.32
RAB40BQ12829 AL133255.1-201ENST00000606374 441 ntBASIC0.56□□□□□ -2.32
RAB40BQ12829 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.55□□□□□ -2.32
RAB40BQ12829 Y_RNA.222-201ENST00000364264 102 ntBASIC0.55□□□□□ -2.32
RAB40BQ12829 Y_RNA.418-201ENST00000384029 102 ntBASIC0.55□□□□□ -2.32
RAB40BQ12829 MIR92A1-201ENST00000385233 78 ntBASIC0.55□□□□□ -2.32
RAB40BQ12829 MT-TD-201ENST00000387419 68 ntBASIC0.55□□□□□ -2.32
RAB40BQ12829 MIR1827-201ENST00000408549 66 ntBASIC0.55□□□□□ -2.32
RAB40BQ12829 Y_RNA.602-201ENST00000410535 92 ntBASIC0.55□□□□□ -2.32
RAB40BQ12829 AC098869.1-201ENST00000481627 292 ntBASIC0.55□□□□□ -2.32
RAB40BQ12829 RNU6-397P-201ENST00000516226 104 ntBASIC0.55□□□□□ -2.32
RAB40BQ12829 MIR548AO-201ENST00000579992 96 ntBASIC0.55□□□□□ -2.32
RAB40BQ12829 AC124312.5-201ENST00000604451 268 ntBASIC0.55□□□□□ -2.32
RAB40BQ12829 MIR4791-201ENST00000607666 84 ntBASIC0.55□□□□□ -2.32
RAB40BQ12829 uc_338.22-201ENST00000622722 187 ntBASIC0.55□□□□□ -2.32
RAB40BQ12829 MIR1-1-201ENST00000362147 71 ntBASIC0.54□□□□□ -2.32
RAB40BQ12829 Y_RNA.168-201ENST00000363740 102 ntBASIC0.54□□□□□ -2.32
RAB40BQ12829 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
RAB40BQ12829 Y_RNA.445-201ENST00000384168 102 ntBASIC0.54□□□□□ -2.32
RAB40BQ12829 RNY3P14-201ENST00000384309 102 ntBASIC0.54□□□□□ -2.32
RAB40BQ12829 SNORD105-201ENST00000386910 85 ntBASIC0.54□□□□□ -2.32
RAB40BQ12829 RNU6-308P-201ENST00000390957 107 ntBASIC0.54□□□□□ -2.32
RAB40BQ12829 RNU6-847P-201ENST00000411115 108 ntBASIC0.54□□□□□ -2.32
RAB40BQ12829 MTND4P19-201ENST00000446659 478 ntBASIC0.54□□□□□ -2.32
RAB40BQ12829 AC023449.1-201ENST00000454464 154 ntBASIC0.54□□□□□ -2.32
RAB40BQ12829 RNU4-57P-201ENST00000515980 135 ntBASIC0.54□□□□□ -2.32
RAB40BQ12829 MIR5000-201ENST00000577717 103 ntBASIC0.54□□□□□ -2.32
RAB40BQ12829 AC011195.1-201ENST00000578177 177 ntBASIC0.54□□□□□ -2.32
RAB40BQ12829 SNORA4-201ENST00000584302 138 ntBASIC0.54□□□□□ -2.32
RAB40BQ12829 MTND1P7-201ENST00000632801 297 ntBASIC0.54□□□□□ -2.32
RAB40BQ12829 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.53□□□□□ -2.32
RAB40BQ12829 RNU6-1205P-201ENST00000363625 106 ntBASIC0.53□□□□□ -2.32
RAB40BQ12829 SNORA63.7-201ENST00000365579 123 ntBASIC0.53□□□□□ -2.32
RAB40BQ12829 RNU6-102P-201ENST00000384485 104 ntBASIC0.53□□□□□ -2.32
RAB40BQ12829 RNU6-763P-201ENST00000390865 106 ntBASIC0.53□□□□□ -2.32
RAB40BQ12829 RNU1-119P-201ENST00000391122 165 ntBASIC0.53□□□□□ -2.32
RAB40BQ12829 RNU6-764P-201ENST00000516396 105 ntBASIC0.53□□□□□ -2.32
RAB40BQ12829 AC243994.1-201ENST00000618627 109 ntBASIC0.53□□□□□ -2.32
RAB40BQ12829 MIR6734-201ENST00000621166 68 ntBASIC0.53□□□□□ -2.32
RAB40BQ12829 AC090574.1-201ENST00000623186 233 ntBASIC0.53□□□□□ -2.32
RAB40BQ12829 MIR369-201ENST00000362155 70 ntBASIC0.52□□□□□ -2.33
RAB40BQ12829 RNU4-90P-201ENST00000362773 141 ntBASIC0.52□□□□□ -2.33
RAB40BQ12829 Y_RNA.122-201ENST00000363331 96 ntBASIC0.52□□□□□ -2.33
RAB40BQ12829 Y_RNA.136-201ENST00000363444 102 ntBASIC0.52□□□□□ -2.33
RAB40BQ12829 Y_RNA.183-201ENST00000363882 113 ntBASIC0.52□□□□□ -2.33
RAB40BQ12829 Y_RNA.376-201ENST00000365638 108 ntBASIC0.52□□□□□ -2.33
RAB40BQ12829 Y_RNA.395-201ENST00000383945 109 ntBASIC0.52□□□□□ -2.33
RAB40BQ12829 RNU6-144P-201ENST00000383951 107 ntBASIC0.52□□□□□ -2.33
RAB40BQ12829 Y_RNA.569-201ENST00000384749 103 ntBASIC0.52□□□□□ -2.33
RAB40BQ12829 MIR508-201ENST00000384857 115 ntBASIC0.52□□□□□ -2.33
RAB40BQ12829 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
RAB40BQ12829 AC244098.3-201ENST00000424803 96 ntBASIC0.52□□□□□ -2.33
RAB40BQ12829 HSPE1P25-201ENST00000455484 251 ntBASIC0.52□□□□□ -2.33
RAB40BQ12829 MRPS35P2-201ENST00000508242 191 ntBASIC0.52□□□□□ -2.33
RAB40BQ12829 RNU6-496P-201ENST00000516145 99 ntBASIC0.52□□□□□ -2.33
RAB40BQ12829 Y_RNA.715-201ENST00000517082 110 ntBASIC0.52□□□□□ -2.33
RAB40BQ12829 C8orf59P2-201ENST00000603441 271 ntBASIC0.52□□□□□ -2.33
RAB40BQ12829 AP000753.3-201ENST00000604083 169 ntBASIC0.52□□□□□ -2.33
RAB40BQ12829 AC090971.5-201ENST00000621102 293 ntBASIC0.52□□□□□ -2.33
RAB40BQ12829 MT-TN-201ENST00000387400 73 ntBASIC0.51□□□□□ -2.33
RAB40BQ12829 RNU6-733P-201ENST00000410759 104 ntBASIC0.51□□□□□ -2.33
RAB40BQ12829 RNA5SP121-201ENST00000516537 101 ntBASIC0.51□□□□□ -2.33
RAB40BQ12829 RNU7-25P-201ENST00000516544 62 ntBASIC0.51□□□□□ -2.33
RAB40BQ12829 RAC1P9-201ENST00000604990 392 ntBASIC0.51□□□□□ -2.33
RAB40BQ12829 AC022140.2-201ENST00000623500 188 ntBASIC0.51□□□□□ -2.33
RAB40BQ12829 AC068700.1-201ENST00000565862 3754 ntBASIC0.51□□□□□ -2.33
RAB40BQ12829 MIR377-201ENST00000362145 69 ntBASIC0.5□□□□□ -2.33
RAB40BQ12829 Y_RNA.14-201ENST00000362415 103 ntBASIC0.5□□□□□ -2.33
RAB40BQ12829 Y_RNA.431-201ENST00000384086 102 ntBASIC0.5□□□□□ -2.33
RAB40BQ12829 Y_RNA.547-201ENST00000384654 119 ntBASIC0.5□□□□□ -2.33
RAB40BQ12829 RNU6-205P-201ENST00000390858 107 ntBASIC0.5□□□□□ -2.33
RAB40BQ12829 SNORD115-46-201ENST00000390982 71 ntBASIC0.5□□□□□ -2.33
RAB40BQ12829 MIR548O-201ENST00000408583 114 ntBASIC0.5□□□□□ -2.33
RAB40BQ12829 RNU6-383P-201ENST00000410864 94 ntBASIC0.5□□□□□ -2.33
RAB40BQ12829 RNA5SP222-201ENST00000411039 105 ntBASIC0.5□□□□□ -2.33
RAB40BQ12829 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.5□□□□□ -2.33
RAB40BQ12829 MTCO1P5-201ENST00000433573 344 ntBASIC0.5□□□□□ -2.33
RAB40BQ12829 AC107297.1-201ENST00000459991 176 ntBASIC0.5□□□□□ -2.33
RAB40BQ12829 RNU2-13P-201ENST00000515909 113 ntBASIC0.5□□□□□ -2.33
RAB40BQ12829 RNU4-54P-201ENST00000516428 129 ntBASIC0.5□□□□□ -2.33
RAB40BQ12829 RNU7-149P-201ENST00000516739 59 ntBASIC0.5□□□□□ -2.33
RAB40BQ12829 RNU6-897P-201ENST00000517135 105 ntBASIC0.5□□□□□ -2.33
RAB40BQ12829 AP003484.1-201ENST00000530974 250 ntBASIC0.5□□□□□ -2.33
RAB40BQ12829 AL512605.2-201ENST00000592972 256 ntBASIC0.5□□□□□ -2.33
RAB40BQ12829 uc_338.17-201ENST00000619633 179 ntBASIC0.5□□□□□ -2.33
RAB40BQ12829 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
RAB40BQ12829 SNORD45.3-201ENST00000363836 72 ntBASIC0.49□□□□□ -2.33
RAB40BQ12829 RNU6-450P-201ENST00000364654 107 ntBASIC0.49□□□□□ -2.33
RAB40BQ12829 Y_RNA.269-201ENST00000364685 89 ntBASIC0.49□□□□□ -2.33
RAB40BQ12829 Y_RNA.419-201ENST00000384041 102 ntBASIC0.49□□□□□ -2.33
RAB40BQ12829 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.49□□□□□ -2.33
RAB40BQ12829 AC022028.1-201ENST00000412054 408 ntBASIC0.49□□□□□ -2.33
RAB40BQ12829 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.49□□□□□ -2.33
RAB40BQ12829 Y_RNA.639-201ENST00000458981 102 ntBASIC0.49□□□□□ -2.33
RAB40BQ12829 snoU13.18-201ENST00000459483 104 ntBASIC0.49□□□□□ -2.33
RAB40BQ12829 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.49□□□□□ -2.33
RAB40BQ12829 AC013791.1-201ENST00000616619 62 ntBASIC0.49□□□□□ -2.33
RAB40BQ12829 uc_338.4-201ENST00000616635 176 ntBASIC0.49□□□□□ -2.33
RAB40BQ12829 RMST_2.1-201ENST00000617263 136 ntBASIC0.49□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 186.8 ms