Protein–RNA interactions for Protein: Q07011

TNFRSF9, Tumor necrosis factor receptor superfamily member 9, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9Q07011 AC104695.3-201ENST00000604052 296 ntBASIC0.47□□□□□ -2.33
TNFRSF9Q07011 AC104465.1-201ENST00000611365 139 ntBASIC0.47□□□□□ -2.33
TNFRSF9Q07011 SEPT14P17-201ENST00000617978 177 ntBASIC0.47□□□□□ -2.33
TNFRSF9Q07011 RNU6-674P-201ENST00000363831 107 ntBASIC0.46□□□□□ -2.34
TNFRSF9Q07011 RNU6-268P-201ENST00000364174 107 ntBASIC0.46□□□□□ -2.34
TNFRSF9Q07011 RNU6-450P-201ENST00000364654 107 ntBASIC0.46□□□□□ -2.34
TNFRSF9Q07011 SNORA72.4-201ENST00000384174 132 ntBASIC0.46□□□□□ -2.34
TNFRSF9Q07011 RNU6-102P-201ENST00000384485 104 ntBASIC0.46□□□□□ -2.34
TNFRSF9Q07011 Y_RNA.509-201ENST00000384506 99 ntBASIC0.46□□□□□ -2.34
TNFRSF9Q07011 MIR570-201ENST00000384917 97 ntBASIC0.46□□□□□ -2.34
TNFRSF9Q07011 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
TNFRSF9Q07011 SNORD115-46-201ENST00000390982 71 ntBASIC0.46□□□□□ -2.34
TNFRSF9Q07011 SNORD72-201ENST00000390994 80 ntBASIC0.46□□□□□ -2.34
TNFRSF9Q07011 MTCO2P33-201ENST00000402100 465 ntBASIC0.46□□□□□ -2.34
TNFRSF9Q07011 MIR1302-7-201ENST00000408841 72 ntBASIC0.46□□□□□ -2.34
TNFRSF9Q07011 Y_RNA.602-201ENST00000410535 92 ntBASIC0.46□□□□□ -2.34
TNFRSF9Q07011 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.46□□□□□ -2.34
TNFRSF9Q07011 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.46□□□□□ -2.34
TNFRSF9Q07011 HSPE1P25-201ENST00000455484 251 ntBASIC0.46□□□□□ -2.34
TNFRSF9Q07011 Y_RNA.639-201ENST00000458981 102 ntBASIC0.46□□□□□ -2.34
TNFRSF9Q07011 RNU6-437P-201ENST00000459408 95 ntBASIC0.46□□□□□ -2.34
TNFRSF9Q07011 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.46□□□□□ -2.34
TNFRSF9Q07011 RNU6-764P-201ENST00000516396 105 ntBASIC0.46□□□□□ -2.34
TNFRSF9Q07011 RNU4-54P-201ENST00000516428 129 ntBASIC0.46□□□□□ -2.34
TNFRSF9Q07011 RNU6-229P-201ENST00000516614 102 ntBASIC0.46□□□□□ -2.34
TNFRSF9Q07011 Y_RNA.715-201ENST00000517082 110 ntBASIC0.46□□□□□ -2.34
TNFRSF9Q07011 RNU6-897P-201ENST00000517135 105 ntBASIC0.46□□□□□ -2.34
TNFRSF9Q07011 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.46□□□□□ -2.34
TNFRSF9Q07011 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.46□□□□□ -2.34
TNFRSF9Q07011 AC131055.1-201ENST00000584626 316 ntBASIC0.46□□□□□ -2.34
TNFRSF9Q07011 C8orf59P2-201ENST00000603441 271 ntBASIC0.46□□□□□ -2.34
TNFRSF9Q07011 RAC1P9-201ENST00000604990 392 ntBASIC0.46□□□□□ -2.34
TNFRSF9Q07011 AC007742.2-201ENST00000618226 398 ntBASIC0.46□□□□□ -2.34
TNFRSF9Q07011 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.46□□□□□ -2.34
TNFRSF9Q07011 Y_RNA.105-201ENST00000363182 111 ntBASIC0.45□□□□□ -2.34
TNFRSF9Q07011 Y_RNA.183-201ENST00000363882 113 ntBASIC0.45□□□□□ -2.34
TNFRSF9Q07011 RNA5SP499-201ENST00000363982 119 ntBASIC0.45□□□□□ -2.34
TNFRSF9Q07011 RNU6-1335P-201ENST00000365426 107 ntBASIC0.45□□□□□ -2.34
TNFRSF9Q07011 Y_RNA.394-201ENST00000383942 103 ntBASIC0.45□□□□□ -2.34
TNFRSF9Q07011 Y_RNA.445-201ENST00000384168 102 ntBASIC0.45□□□□□ -2.34
TNFRSF9Q07011 MIR15B-201ENST00000385045 98 ntBASIC0.45□□□□□ -2.34
TNFRSF9Q07011 MIR605-201ENST00000385078 83 ntBASIC0.45□□□□□ -2.34
TNFRSF9Q07011 MIR936-201ENST00000401264 98 ntBASIC0.45□□□□□ -2.34
TNFRSF9Q07011 AL603910.2-201ENST00000407268 136 ntBASIC0.45□□□□□ -2.34
TNFRSF9Q07011 RNU6-121P-201ENST00000410525 99 ntBASIC0.45□□□□□ -2.34
TNFRSF9Q07011 MTND4LP11-201ENST00000422184 280 ntBASIC0.45□□□□□ -2.34
TNFRSF9Q07011 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.45□□□□□ -2.34
TNFRSF9Q07011 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.45□□□□□ -2.34
TNFRSF9Q07011 AL392103.1-201ENST00000447000 198 ntBASIC0.45□□□□□ -2.34
TNFRSF9Q07011 AL157398.1-201ENST00000452981 186 ntBASIC0.45□□□□□ -2.34
TNFRSF9Q07011 MRPS35P2-201ENST00000508242 191 ntBASIC0.45□□□□□ -2.34
TNFRSF9Q07011 AC109810.1-201ENST00000534066 224 ntBASIC0.45□□□□□ -2.34
TNFRSF9Q07011 MIR4300-201ENST00000581016 96 ntBASIC0.45□□□□□ -2.34
TNFRSF9Q07011 AC005357.1-201ENST00000588399 301 ntBASIC0.45□□□□□ -2.34
TNFRSF9Q07011 AL512605.2-201ENST00000592972 256 ntBASIC0.45□□□□□ -2.34
TNFRSF9Q07011 Pinc.1-201ENST00000616452 154 ntBASIC0.45□□□□□ -2.34
TNFRSF9Q07011 MIR376A1-201ENST00000616574 68 ntBASIC0.45□□□□□ -2.34
TNFRSF9Q07011 Y_RNA.28-201ENST00000362554 111 ntBASIC0.44□□□□□ -2.34
TNFRSF9Q07011 Y_RNA.389-201ENST00000383924 113 ntBASIC0.44□□□□□ -2.34
TNFRSF9Q07011 RNU6-442P-201ENST00000383968 104 ntBASIC0.44□□□□□ -2.34
TNFRSF9Q07011 Y_RNA.431-201ENST00000384086 102 ntBASIC0.44□□□□□ -2.34
TNFRSF9Q07011 SNORD38C-201ENST00000384381 69 ntBASIC0.44□□□□□ -2.34
TNFRSF9Q07011 RNU6-763P-201ENST00000390865 106 ntBASIC0.44□□□□□ -2.34
TNFRSF9Q07011 U8.17-201ENST00000391292 132 ntBASIC0.44□□□□□ -2.34
TNFRSF9Q07011 RNU6-383P-201ENST00000410864 94 ntBASIC0.44□□□□□ -2.34
TNFRSF9Q07011 AC022028.1-201ENST00000412054 408 ntBASIC0.44□□□□□ -2.34
TNFRSF9Q07011 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.44□□□□□ -2.34
TNFRSF9Q07011 SNORD11-201ENST00000459124 84 ntBASIC0.44□□□□□ -2.34
TNFRSF9Q07011 Y_RNA.637-201ENST00000459424 114 ntBASIC0.44□□□□□ -2.34
TNFRSF9Q07011 AC098869.1-201ENST00000481627 292 ntBASIC0.44□□□□□ -2.34
TNFRSF9Q07011 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.44□□□□□ -2.34
TNFRSF9Q07011 RNU6-496P-201ENST00000516145 99 ntBASIC0.44□□□□□ -2.34
TNFRSF9Q07011 RNU6-830P-201ENST00000516353 107 ntBASIC0.44□□□□□ -2.34
TNFRSF9Q07011 RNA5SP255-201ENST00000516370 107 ntBASIC0.44□□□□□ -2.34
TNFRSF9Q07011 RNU7-181P-201ENST00000517234 74 ntBASIC0.44□□□□□ -2.34
TNFRSF9Q07011 AC036111.3-201ENST00000526389 112 ntBASIC0.44□□□□□ -2.34
TNFRSF9Q07011 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.44□□□□□ -2.34
TNFRSF9Q07011 MIR2681-201ENST00000581814 105 ntBASIC0.44□□□□□ -2.34
TNFRSF9Q07011 AC008507.4-201ENST00000585464 127 ntBASIC0.44□□□□□ -2.34
TNFRSF9Q07011 AC087685.1-201ENST00000587507 141 ntBASIC0.44□□□□□ -2.34
TNFRSF9Q07011 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.44□□□□□ -2.34
TNFRSF9Q07011 AC090574.1-201ENST00000623186 233 ntBASIC0.44□□□□□ -2.34
TNFRSF9Q07011 AC008133.2-201ENST00000624540 351 ntBASIC0.44□□□□□ -2.34
TNFRSF9Q07011 MIR4251-201ENST00000635819 61 ntBASIC0.44□□□□□ -2.34
TNFRSF9Q07011 Y_RNA.136-201ENST00000363444 102 ntBASIC0.43□□□□□ -2.34
TNFRSF9Q07011 RNU6-654P-201ENST00000364373 107 ntBASIC0.43□□□□□ -2.34
TNFRSF9Q07011 SNORA63.7-201ENST00000365579 123 ntBASIC0.43□□□□□ -2.34
TNFRSF9Q07011 Y_RNA.569-201ENST00000384749 103 ntBASIC0.43□□□□□ -2.34
TNFRSF9Q07011 MIR215-201ENST00000384858 110 ntBASIC0.43□□□□□ -2.34
TNFRSF9Q07011 MIR802-201ENST00000390235 94 ntBASIC0.43□□□□□ -2.34
TNFRSF9Q07011 RNU6-1248P-201ENST00000391096 64 ntBASIC0.43□□□□□ -2.34
TNFRSF9Q07011 MIR1252-201ENST00000408861 65 ntBASIC0.43□□□□□ -2.34
TNFRSF9Q07011 RNA5SP95-201ENST00000410319 137 ntBASIC0.43□□□□□ -2.34
TNFRSF9Q07011 RNA5SP193-201ENST00000410353 107 ntBASIC0.43□□□□□ -2.34
TNFRSF9Q07011 AL035398.1-201ENST00000430869 322 ntBASIC0.43□□□□□ -2.34
TNFRSF9Q07011 MTCO1P5-201ENST00000433573 344 ntBASIC0.43□□□□□ -2.34
TNFRSF9Q07011 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.43□□□□□ -2.34
TNFRSF9Q07011 AC012433.1-201ENST00000588916 398 ntBASIC0.43□□□□□ -2.34
TNFRSF9Q07011 RNU6-94P-201ENST00000607728 107 ntBASIC0.43□□□□□ -2.34
TNFRSF9Q07011 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.43□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 273.2 ms