Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 RNU4-77P-201ENST00000516692 156 ntBASIC0.49□□□□□ -2.33
MSH6P52701 MIR2681-201ENST00000581814 105 ntBASIC0.49□□□□□ -2.33
MSH6P52701 AL121655.1-201ENST00000605811 308 ntBASIC0.49□□□□□ -2.33
MSH6P52701 AL132765.2-201ENST00000610812 351 ntBASIC0.49□□□□□ -2.33
MSH6P52701 MIR548AY-201ENST00000617669 107 ntBASIC0.49□□□□□ -2.33
MSH6P52701 Y_RNA.170-201ENST00000363746 110 ntBASIC0.48□□□□□ -2.33
MSH6P52701 RNU6-674P-201ENST00000363831 107 ntBASIC0.48□□□□□ -2.33
MSH6P52701 Y_RNA.370-201ENST00000365589 108 ntBASIC0.48□□□□□ -2.33
MSH6P52701 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
MSH6P52701 RNU1-119P-201ENST00000391122 165 ntBASIC0.48□□□□□ -2.33
MSH6P52701 MIR1827-201ENST00000408549 66 ntBASIC0.48□□□□□ -2.33
MSH6P52701 AC244098.3-201ENST00000424803 96 ntBASIC0.48□□□□□ -2.33
MSH6P52701 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.48□□□□□ -2.33
MSH6P52701 AC067940.1-201ENST00000458411 300 ntBASIC0.48□□□□□ -2.33
MSH6P52701 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.48□□□□□ -2.33
MSH6P52701 FGF7P4-201ENST00000509595 295 ntBASIC0.48□□□□□ -2.33
MSH6P52701 SNORA40.14-201ENST00000516543 86 ntBASIC0.48□□□□□ -2.33
MSH6P52701 AC093027.1-201ENST00000546698 429 ntBASIC0.48□□□□□ -2.33
MSH6P52701 AC008507.4-201ENST00000585464 127 ntBASIC0.48□□□□□ -2.33
MSH6P52701 UBE2V2P2-201ENST00000587677 504 ntBASIC0.48□□□□□ -2.33
MSH6P52701 AC104695.3-201ENST00000604052 296 ntBASIC0.48□□□□□ -2.33
MSH6P52701 RNU6-1115P-201ENST00000362490 106 ntBASIC0.47□□□□□ -2.33
MSH6P52701 Y_RNA.537-201ENST00000384626 109 ntBASIC0.47□□□□□ -2.33
MSH6P52701 Y_RNA.551-201ENST00000384661 102 ntBASIC0.47□□□□□ -2.33
MSH6P52701 MIR570-201ENST00000384917 97 ntBASIC0.47□□□□□ -2.33
MSH6P52701 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.47□□□□□ -2.33
MSH6P52701 AC010655.3-201ENST00000478818 450 ntBASIC0.47□□□□□ -2.33
MSH6P52701 RNU7-110P-201ENST00000516891 62 ntBASIC0.47□□□□□ -2.33
MSH6P52701 MIR5589-201ENST00000579442 60 ntBASIC0.47□□□□□ -2.33
MSH6P52701 RPS29P30-201ENST00000600975 111 ntBASIC0.47□□□□□ -2.33
MSH6P52701 AC092447.9-201ENST00000603395 144 ntBASIC0.47□□□□□ -2.33
MSH6P52701 AC006441.5-201ENST00000612680 209 ntBASIC0.47□□□□□ -2.33
MSH6P52701 AC104985.2-201ENST00000620598 500 ntBASIC0.47□□□□□ -2.33
MSH6P52701 MIR1302-1-201ENST00000637932 143 ntBASIC0.47□□□□□ -2.33
MSH6P52701 RNU6-801P-201ENST00000364087 105 ntBASIC0.46□□□□□ -2.34
MSH6P52701 RNU4-50P-201ENST00000364361 141 ntBASIC0.46□□□□□ -2.34
MSH6P52701 Y_RNA.252-201ENST00000364556 101 ntBASIC0.46□□□□□ -2.34
MSH6P52701 RNU6-580P-201ENST00000365159 107 ntBASIC0.46□□□□□ -2.34
MSH6P52701 RNU1-115P-201ENST00000365329 160 ntBASIC0.46□□□□□ -2.34
MSH6P52701 RNU6-396P-201ENST00000365369 105 ntBASIC0.46□□□□□ -2.34
MSH6P52701 SNORA2B-201ENST00000384583 137 ntBASIC0.46□□□□□ -2.34
MSH6P52701 SNORD105-201ENST00000386910 85 ntBASIC0.46□□□□□ -2.34
MSH6P52701 SNORA36B-201ENST00000410438 131 ntBASIC0.46□□□□□ -2.34
MSH6P52701 RNU6-994P-201ENST00000410507 111 ntBASIC0.46□□□□□ -2.34
MSH6P52701 Y_RNA.632-201ENST00000459189 102 ntBASIC0.46□□□□□ -2.34
MSH6P52701 RNU4-54P-201ENST00000516428 129 ntBASIC0.46□□□□□ -2.34
MSH6P52701 MIR2115-201ENST00000516657 100 ntBASIC0.46□□□□□ -2.34
MSH6P52701 MIR3145-201ENST00000580727 82 ntBASIC0.46□□□□□ -2.34
MSH6P52701 AL606534.2-204ENST00000635008 178 ntBASIC0.46□□□□□ -2.34
MSH6P52701 Y_RNA.39-201ENST00000362620 98 ntBASIC0.45□□□□□ -2.34
MSH6P52701 Y_RNA.168-201ENST00000363740 102 ntBASIC0.45□□□□□ -2.34
MSH6P52701 Y_RNA.439-201ENST00000384119 94 ntBASIC0.45□□□□□ -2.34
MSH6P52701 AL603910.2-201ENST00000407268 136 ntBASIC0.45□□□□□ -2.34
MSH6P52701 RNA5SP95-201ENST00000410319 137 ntBASIC0.45□□□□□ -2.34
MSH6P52701 AL160004.2-201ENST00000432935 350 ntBASIC0.45□□□□□ -2.34
MSH6P52701 RNU6-437P-201ENST00000459408 95 ntBASIC0.45□□□□□ -2.34
MSH6P52701 U8.20-201ENST00000459445 131 ntBASIC0.45□□□□□ -2.34
MSH6P52701 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.45□□□□□ -2.34
MSH6P52701 RNU2-13P-201ENST00000515909 113 ntBASIC0.45□□□□□ -2.34
MSH6P52701 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC0.45□□□□□ -2.34
MSH6P52701 AC018659.1-201ENST00000551083 169 ntBASIC0.45□□□□□ -2.34
MSH6P52701 MIR548AO-201ENST00000579992 96 ntBASIC0.45□□□□□ -2.34
MSH6P52701 AC012433.1-201ENST00000588916 398 ntBASIC0.45□□□□□ -2.34
MSH6P52701 AL080274.1-201ENST00000605565 220 ntBASIC0.45□□□□□ -2.34
MSH6P52701 SNORD58B-201ENST00000607313 66 ntBASIC0.45□□□□□ -2.34
MSH6P52701 AL138825.1-201ENST00000618587 192 ntBASIC0.45□□□□□ -2.34
MSH6P52701 MIR1-1-201ENST00000362147 71 ntBASIC0.45□□□□□ -2.34
MSH6P52701 Y_RNA.5-201ENST00000362334 102 ntBASIC0.45□□□□□ -2.34
MSH6P52701 Y_RNA.70-201ENST00000362886 110 ntBASIC0.45□□□□□ -2.34
MSH6P52701 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.45□□□□□ -2.34
MSH6P52701 RNU6-937P-201ENST00000384325 106 ntBASIC0.45□□□□□ -2.34
MSH6P52701 MIR1278-201ENST00000408753 81 ntBASIC0.45□□□□□ -2.34
MSH6P52701 RNU4-30P-201ENST00000410245 143 ntBASIC0.45□□□□□ -2.34
MSH6P52701 RNU2-14P-201ENST00000411053 191 ntBASIC0.45□□□□□ -2.34
MSH6P52701 AC244023.1-201ENST00000426884 112 ntBASIC0.45□□□□□ -2.34
MSH6P52701 RNU7-141P-201ENST00000459304 62 ntBASIC0.45□□□□□ -2.34
MSH6P52701 RNU6-1007P-201ENST00000516586 107 ntBASIC0.45□□□□□ -2.34
MSH6P52701 Y_RNA.713-201ENST00000517013 96 ntBASIC0.45□□□□□ -2.34
MSH6P52701 RNU7-181P-201ENST00000517234 74 ntBASIC0.45□□□□□ -2.34
MSH6P52701 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.45□□□□□ -2.34
MSH6P52701 RPL23AP91-201ENST00000569211 455 ntBASIC0.45□□□□□ -2.34
MSH6P52701 AC011195.1-201ENST00000578177 177 ntBASIC0.45□□□□□ -2.34
MSH6P52701 AC242498.1-201ENST00000604134 111 ntBASIC0.45□□□□□ -2.34
MSH6P52701 MIR4791-201ENST00000607666 84 ntBASIC0.45□□□□□ -2.34
MSH6P52701 AC243994.1-201ENST00000618627 109 ntBASIC0.45□□□□□ -2.34
MSH6P52701 MTND1P7-201ENST00000632801 297 ntBASIC0.45□□□□□ -2.34
MSH6P52701 Y_RNA.80-201ENST00000362996 102 ntBASIC0.44□□□□□ -2.34
MSH6P52701 Y_RNA.143-201ENST00000363520 106 ntBASIC0.44□□□□□ -2.34
MSH6P52701 RNU6-1048P-201ENST00000364054 107 ntBASIC0.44□□□□□ -2.34
MSH6P52701 RNU6-1283P-201ENST00000365314 105 ntBASIC0.44□□□□□ -2.34
MSH6P52701 Y_RNA.383-201ENST00000383855 97 ntBASIC0.44□□□□□ -2.34
MSH6P52701 Y_RNA.485-201ENST00000384395 102 ntBASIC0.44□□□□□ -2.34
MSH6P52701 MT-TN-201ENST00000387400 73 ntBASIC0.44□□□□□ -2.34
MSH6P52701 MIR802-201ENST00000390235 94 ntBASIC0.44□□□□□ -2.34
MSH6P52701 SNORD72-201ENST00000390994 80 ntBASIC0.44□□□□□ -2.34
MSH6P52701 MTCO2P33-201ENST00000402100 465 ntBASIC0.44□□□□□ -2.34
MSH6P52701 SNORD19B-201ENST00000459623 84 ntBASIC0.44□□□□□ -2.34
MSH6P52701 MIR4300-201ENST00000581016 96 ntBASIC0.44□□□□□ -2.34
MSH6P52701 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.44□□□□□ -2.34
MSH6P52701 RNU6-369P-201ENST00000362515 102 ntBASIC0.43□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 210.7 ms