Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.52□□□□□ -2.17
HOXA13P31271 Y_RNA.203-201ENST00000364106 102 ntBASIC1.51□□□□□ -2.17
HOXA13P31271 Y_RNA.796-201ENST00000364268 102 ntBASIC1.51□□□□□ -2.17
HOXA13P31271 Y_RNA.229-201ENST00000364347 113 ntBASIC1.51□□□□□ -2.17
HOXA13P31271 RNU6-392P-201ENST00000364926 101 ntBASIC1.51□□□□□ -2.17
HOXA13P31271 Y_RNA.799-201ENST00000364992 102 ntBASIC1.51□□□□□ -2.17
HOXA13P31271 MIR626-201ENST00000385032 94 ntBASIC1.51□□□□□ -2.17
HOXA13P31271 RNU6-918P-201ENST00000391219 106 ntBASIC1.51□□□□□ -2.17
HOXA13P31271 U8.16-201ENST00000391279 133 ntBASIC1.51□□□□□ -2.17
HOXA13P31271 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.51□□□□□ -2.17
HOXA13P31271 NDUFA4P2-201ENST00000489989 244 ntBASIC1.51□□□□□ -2.17
HOXA13P31271 RNA5SP445-201ENST00000515889 115 ntBASIC1.51□□□□□ -2.17
HOXA13P31271 Y_RNA.676-201ENST00000516393 96 ntBASIC1.51□□□□□ -2.17
HOXA13P31271 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
HOXA13P31271 AL021707.8-201ENST00000609428 183 ntBASIC1.51□□□□□ -2.17
HOXA13P31271 Y_RNA.802-201ENST00000614892 130 ntBASIC1.51□□□□□ -2.17
HOXA13P31271 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
HOXA13P31271 AL121890.5-201ENST00000620848 304 ntBASIC1.51□□□□□ -2.17
HOXA13P31271 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.5□□□□□ -2.17
HOXA13P31271 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
HOXA13P31271 MIR367-201ENST00000362299 68 ntBASIC1.5□□□□□ -2.17
HOXA13P31271 RNY1P10-201ENST00000363268 113 ntBASIC1.5□□□□□ -2.17
HOXA13P31271 RNU6-1209P-201ENST00000363655 107 ntBASIC1.5□□□□□ -2.17
HOXA13P31271 Y_RNA.262-201ENST00000364641 102 ntBASIC1.5□□□□□ -2.17
HOXA13P31271 RNU4-17P-201ENST00000365598 141 ntBASIC1.5□□□□□ -2.17
HOXA13P31271 MIR660-201ENST00000385235 97 ntBASIC1.5□□□□□ -2.17
HOXA13P31271 RPS29P29-201ENST00000456396 171 ntBASIC1.5□□□□□ -2.17
HOXA13P31271 SNORD11-201ENST00000459124 84 ntBASIC1.5□□□□□ -2.17
HOXA13P31271 OR9P1P-201ENST00000496431 281 ntBASIC1.5□□□□□ -2.17
HOXA13P31271 RNU6-561P-201ENST00000516222 102 ntBASIC1.5□□□□□ -2.17
HOXA13P31271 RNU7-116P-201ENST00000516940 62 ntBASIC1.5□□□□□ -2.17
HOXA13P31271 RPL23AP91-201ENST00000569211 455 ntBASIC1.5□□□□□ -2.17
HOXA13P31271 RNU2-4P-201ENST00000606190 192 ntBASIC1.5□□□□□ -2.17
HOXA13P31271 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
HOXA13P31271 MIR302D-201ENST00000362275 68 ntBASIC1.49□□□□□ -2.17
HOXA13P31271 RNU6-163P-201ENST00000384396 106 ntBASIC1.49□□□□□ -2.17
HOXA13P31271 SNORA8.3-201ENST00000384679 139 ntBASIC1.49□□□□□ -2.17
HOXA13P31271 RNU6-847P-201ENST00000411115 108 ntBASIC1.49□□□□□ -2.17
HOXA13P31271 AC245517.4-201ENST00000448601 281 ntBASIC1.49□□□□□ -2.17
HOXA13P31271 AC093850.1-201ENST00000454121 251 ntBASIC1.49□□□□□ -2.17
HOXA13P31271 RNU1-98P-201ENST00000458992 160 ntBASIC1.49□□□□□ -2.17
HOXA13P31271 Y_RNA.644-201ENST00000459006 113 ntBASIC1.49□□□□□ -2.17
HOXA13P31271 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.49□□□□□ -2.17
HOXA13P31271 AC074198.2-201ENST00000508153 258 ntBASIC1.49□□□□□ -2.17
HOXA13P31271 Y_RNA.674-201ENST00000516362 113 ntBASIC1.49□□□□□ -2.17
HOXA13P31271 AL358944.1-201ENST00000528537 144 ntBASIC1.49□□□□□ -2.17
HOXA13P31271 AL049861.1-201ENST00000603130 150 ntBASIC1.49□□□□□ -2.17
HOXA13P31271 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
HOXA13P31271 MIRLET7C-201ENST00000362160 84 ntBASIC1.48□□□□□ -2.17
HOXA13P31271 RNU6-674P-201ENST00000363831 107 ntBASIC1.48□□□□□ -2.17
HOXA13P31271 RNU6-424P-201ENST00000384367 105 ntBASIC1.48□□□□□ -2.17
HOXA13P31271 MIR526A2-201ENST00000390198 65 ntBASIC1.48□□□□□ -2.17
HOXA13P31271 SNORA40.6-201ENST00000391153 128 ntBASIC1.48□□□□□ -2.17
HOXA13P31271 RPL30P13-201ENST00000418873 348 ntBASIC1.48□□□□□ -2.17
HOXA13P31271 SNRPGP10-201ENST00000432323 225 ntBASIC1.48□□□□□ -2.17
HOXA13P31271 AC027119.1-201ENST00000440877 241 ntBASIC1.48□□□□□ -2.17
HOXA13P31271 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.48□□□□□ -2.17
HOXA13P31271 COX6CP14-201ENST00000469580 174 ntBASIC1.48□□□□□ -2.17
HOXA13P31271 RNU6-1219P-201ENST00000516143 112 ntBASIC1.48□□□□□ -2.17
HOXA13P31271 RNU6-1007P-201ENST00000516586 107 ntBASIC1.48□□□□□ -2.17
HOXA13P31271 RNU6-902P-201ENST00000517212 91 ntBASIC1.48□□□□□ -2.17
HOXA13P31271 MIR4724-201ENST00000579485 89 ntBASIC1.48□□□□□ -2.17
HOXA13P31271 MIR3668-201ENST00000582138 75 ntBASIC1.48□□□□□ -2.17
HOXA13P31271 MIR3660-201ENST00000584845 100 ntBASIC1.48□□□□□ -2.17
HOXA13P31271 RNU6-682P-201ENST00000363843 106 ntBASIC1.47□□□□□ -2.17
HOXA13P31271 RNU6-53P-201ENST00000365367 106 ntBASIC1.47□□□□□ -2.17
HOXA13P31271 SNORD72-201ENST00000390994 80 ntBASIC1.47□□□□□ -2.17
HOXA13P31271 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.47□□□□□ -2.17
HOXA13P31271 PIGPP3-201ENST00000425307 415 ntBASIC1.47□□□□□ -2.17
HOXA13P31271 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.47□□□□□ -2.17
HOXA13P31271 SNORA81.3-201ENST00000517283 198 ntBASIC1.47□□□□□ -2.17
HOXA13P31271 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.47□□□□□ -2.17
HOXA13P31271 AC004792.1-201ENST00000614523 137 ntBASIC1.47□□□□□ -2.17
HOXA13P31271 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
HOXA13P31271 RNU6-1084P-201ENST00000362498 107 ntBASIC1.46□□□□□ -2.18
HOXA13P31271 RNU6-199P-201ENST00000362954 107 ntBASIC1.46□□□□□ -2.18
HOXA13P31271 Y_RNA.238-201ENST00000364441 102 ntBASIC1.46□□□□□ -2.18
HOXA13P31271 RNU6-144P-201ENST00000383951 107 ntBASIC1.46□□□□□ -2.18
HOXA13P31271 Y_RNA.412-201ENST00000384001 104 ntBASIC1.46□□□□□ -2.18
HOXA13P31271 RNU6-997P-201ENST00000384725 107 ntBASIC1.46□□□□□ -2.18
HOXA13P31271 Y_RNA.571-201ENST00000384753 98 ntBASIC1.46□□□□□ -2.18
HOXA13P31271 MIR522-201ENST00000385071 87 ntBASIC1.46□□□□□ -2.18
HOXA13P31271 RPS27P16-201ENST00000425758 201 ntBASIC1.46□□□□□ -2.18
HOXA13P31271 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.46□□□□□ -2.18
HOXA13P31271 HMGN1P7-201ENST00000491722 313 ntBASIC1.46□□□□□ -2.18
HOXA13P31271 RNU6-861P-201ENST00000516745 106 ntBASIC1.46□□□□□ -2.18
HOXA13P31271 RNU6-922P-201ENST00000516753 99 ntBASIC1.46□□□□□ -2.18
HOXA13P31271 Y_RNA.150-201ENST00000363562 102 ntBASIC1.45□□□□□ -2.18
HOXA13P31271 RNU6-1020P-201ENST00000363684 107 ntBASIC1.45□□□□□ -2.18
HOXA13P31271 PCNPP3-201ENST00000393579 471 ntBASIC1.45□□□□□ -2.18
HOXA13P31271 RNU5E-9P-201ENST00000411164 104 ntBASIC1.45□□□□□ -2.18
HOXA13P31271 Y_RNA.793-201ENST00000411222 111 ntBASIC1.45□□□□□ -2.18
HOXA13P31271 RNU2-64P-201ENST00000411315 191 ntBASIC1.45□□□□□ -2.18
HOXA13P31271 AC092991.1-201ENST00000477176 376 ntBASIC1.45□□□□□ -2.18
HOXA13P31271 AP002392.1-201ENST00000537692 208 ntBASIC1.45□□□□□ -2.18
HOXA13P31271 AC068338.1-201ENST00000565567 176 ntBASIC1.45□□□□□ -2.18
HOXA13P31271 U6.106-201ENST00000636360 105 ntBASIC1.45□□□□□ -2.18
HOXA13P31271 Y_RNA.29-201ENST00000362570 113 ntBASIC1.44□□□□□ -2.18
HOXA13P31271 Y_RNA.233-201ENST00000364407 101 ntBASIC1.44□□□□□ -2.18
HOXA13P31271 SNORD50B-201ENST00000364995 70 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 261.9 ms