Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 Y_RNA.295-201ENST00000364918 102 ntBASIC-0.15□□□□□ -2.43
TRAV41A0A0B4J266 RNU6-1175P-201ENST00000365200 107 ntBASIC-0.15□□□□□ -2.43
TRAV41A0A0B4J266 RNU6-187P-201ENST00000384139 106 ntBASIC-0.15□□□□□ -2.43
TRAV41A0A0B4J266 Y_RNA.456-201ENST00000384232 111 ntBASIC-0.15□□□□□ -2.43
TRAV41A0A0B4J266 Y_RNA.547-201ENST00000384654 119 ntBASIC-0.15□□□□□ -2.43
TRAV41A0A0B4J266 Y_RNA.559-201ENST00000384686 107 ntBASIC-0.15□□□□□ -2.43
TRAV41A0A0B4J266 MIR7-2-201ENST00000384970 110 ntBASIC-0.15□□□□□ -2.43
TRAV41A0A0B4J266 MIR181A1-201ENST00000385026 110 ntBASIC-0.15□□□□□ -2.43
TRAV41A0A0B4J266 MIR563-201ENST00000385080 79 ntBASIC-0.15□□□□□ -2.43
TRAV41A0A0B4J266 RNU6-127P-201ENST00000390897 107 ntBASIC-0.15□□□□□ -2.43
TRAV41A0A0B4J266 SNORD78.2-201ENST00000391076 69 ntBASIC-0.15□□□□□ -2.43
TRAV41A0A0B4J266 SNORA26.5-201ENST00000391215 123 ntBASIC-0.15□□□□□ -2.43
TRAV41A0A0B4J266 RNU6-1156P-201ENST00000410365 100 ntBASIC-0.15□□□□□ -2.43
TRAV41A0A0B4J266 RNU6-710P-201ENST00000410424 105 ntBASIC-0.15□□□□□ -2.43
TRAV41A0A0B4J266 MTND1P2-201ENST00000430604 821 ntBASIC-0.15□□□□□ -2.43
TRAV41A0A0B4J266 HMGN1P33-201ENST00000432945 451 ntBASIC-0.15□□□□□ -2.43
TRAV41A0A0B4J266 AC005042.3-201ENST00000453230 174 ntBASIC-0.15□□□□□ -2.43
TRAV41A0A0B4J266 RNA5SP268-201ENST00000516828 124 ntBASIC-0.15□□□□□ -2.43
TRAV41A0A0B4J266 MIR4659A-201ENST00000580269 81 ntBASIC-0.15□□□□□ -2.43
TRAV41A0A0B4J266 DEFB117-201ENST00000602356 141 ntBASIC-0.15□□□□□ -2.43
TRAV41A0A0B4J266 AC103591.3-201ENST00000608684 209 ntBASIC-0.15□□□□□ -2.43
TRAV41A0A0B4J266 MIR8055-201ENST00000610739 97 ntBASIC-0.15□□□□□ -2.43
TRAV41A0A0B4J266 MIR2909-201ENST00000617113 69 ntBASIC-0.15□□□□□ -2.43
TRAV41A0A0B4J266 AL109933.3-201ENST00000619095 188 ntBASIC-0.15□□□□□ -2.43
TRAV41A0A0B4J266 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.15□□□□□ -2.43
TRAV41A0A0B4J266 Z97988.1-201ENST00000637697 135 ntBASIC-0.15□□□□□ -2.43
TRAV41A0A0B4J266 MIR30D-201ENST00000362283 70 ntBASIC-0.16□□□□□ -2.44
TRAV41A0A0B4J266 Y_RNA.85-201ENST00000363014 111 ntBASIC-0.16□□□□□ -2.44
TRAV41A0A0B4J266 SNORD81.1-201ENST00000363064 77 ntBASIC-0.16□□□□□ -2.44
TRAV41A0A0B4J266 Y_RNA.450-201ENST00000384198 113 ntBASIC-0.16□□□□□ -2.44
TRAV41A0A0B4J266 RNU6-708P-201ENST00000384217 107 ntBASIC-0.16□□□□□ -2.44
TRAV41A0A0B4J266 Y_RNA.482-201ENST00000384377 111 ntBASIC-0.16□□□□□ -2.44
TRAV41A0A0B4J266 Y_RNA.570-201ENST00000384750 101 ntBASIC-0.16□□□□□ -2.44
TRAV41A0A0B4J266 SNORA75.4-201ENST00000391278 119 ntBASIC-0.16□□□□□ -2.44
TRAV41A0A0B4J266 MIR548H2-201ENST00000408874 88 ntBASIC-0.16□□□□□ -2.44
TRAV41A0A0B4J266 Y_RNA.617-201ENST00000410920 90 ntBASIC-0.16□□□□□ -2.44
TRAV41A0A0B4J266 RNU7-67P-201ENST00000459003 62 ntBASIC-0.16□□□□□ -2.44
TRAV41A0A0B4J266 snoU13.2-201ENST00000459201 104 ntBASIC-0.16□□□□□ -2.44
TRAV41A0A0B4J266 RN7SKP295-201ENST00000517264 153 ntBASIC-0.16□□□□□ -2.44
TRAV41A0A0B4J266 AC245505.1-201ENST00000556398 224 ntBASIC-0.16□□□□□ -2.44
TRAV41A0A0B4J266 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC-0.16□□□□□ -2.44
TRAV41A0A0B4J266 AC005899.2-201ENST00000584353 90 ntBASIC-0.16□□□□□ -2.44
TRAV41A0A0B4J266 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC-0.16□□□□□ -2.44
TRAV41A0A0B4J266 AL355297.3-201ENST00000604082 446 ntBASIC-0.16□□□□□ -2.44
TRAV41A0A0B4J266 Y_RNA.9-201ENST00000362354 101 ntBASIC-0.17□□□□□ -2.44
TRAV41A0A0B4J266 SNORA72.1-201ENST00000363485 129 ntBASIC-0.17□□□□□ -2.44
TRAV41A0A0B4J266 RNA5SP457-201ENST00000363657 124 ntBASIC-0.17□□□□□ -2.44
TRAV41A0A0B4J266 Y_RNA.230-201ENST00000364348 109 ntBASIC-0.17□□□□□ -2.44
TRAV41A0A0B4J266 SNORD38B-201ENST00000384690 67 ntBASIC-0.17□□□□□ -2.44
TRAV41A0A0B4J266 Y_RNA.577-201ENST00000384794 101 ntBASIC-0.17□□□□□ -2.44
TRAV41A0A0B4J266 MIR643-201ENST00000385267 97 ntBASIC-0.17□□□□□ -2.44
TRAV41A0A0B4J266 RNU6-437P-201ENST00000459408 95 ntBASIC-0.17□□□□□ -2.44
TRAV41A0A0B4J266 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.17□□□□□ -2.44
TRAV41A0A0B4J266 RNU6-958P-201ENST00000516995 106 ntBASIC-0.17□□□□□ -2.44
TRAV41A0A0B4J266 MIR8066-201ENST00000617280 78 ntBASIC-0.17□□□□□ -2.44
TRAV41A0A0B4J266 SNORD38B-202ENST00000625943 69 ntBASIC-0.17□□□□□ -2.44
TRAV41A0A0B4J266 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.18□□□□□ -2.44
TRAV41A0A0B4J266 Y_RNA.42-201ENST00000362660 108 ntBASIC-0.18□□□□□ -2.44
TRAV41A0A0B4J266 RNU6-1048P-201ENST00000364054 107 ntBASIC-0.18□□□□□ -2.44
TRAV41A0A0B4J266 Y_RNA.241-201ENST00000364470 117 ntBASIC-0.18□□□□□ -2.44
TRAV41A0A0B4J266 SNORA2A-201ENST00000383885 135 ntBASIC-0.18□□□□□ -2.44
TRAV41A0A0B4J266 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.18□□□□□ -2.44
TRAV41A0A0B4J266 MIR145-201ENST00000384967 88 ntBASIC-0.18□□□□□ -2.44
TRAV41A0A0B4J266 MIR625-201ENST00000385047 85 ntBASIC-0.18□□□□□ -2.44
TRAV41A0A0B4J266 Y_RNA.599-201ENST00000410489 109 ntBASIC-0.18□□□□□ -2.44
TRAV41A0A0B4J266 RNU6-602P-201ENST00000411155 105 ntBASIC-0.18□□□□□ -2.44
TRAV41A0A0B4J266 FCF1P9-201ENST00000412546 282 ntBASIC-0.18□□□□□ -2.44
TRAV41A0A0B4J266 AL512326.2-201ENST00000426359 151 ntBASIC-0.18□□□□□ -2.44
TRAV41A0A0B4J266 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC-0.18□□□□□ -2.44
TRAV41A0A0B4J266 AC107399.1-201ENST00000451226 265 ntBASIC-0.18□□□□□ -2.44
TRAV41A0A0B4J266 RNU7-73P-201ENST00000458743 63 ntBASIC-0.18□□□□□ -2.44
TRAV41A0A0B4J266 RNU7-169P-201ENST00000459456 61 ntBASIC-0.18□□□□□ -2.44
TRAV41A0A0B4J266 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC-0.18□□□□□ -2.44
TRAV41A0A0B4J266 AC007751.1-201ENST00000529260 376 ntBASIC-0.18□□□□□ -2.44
TRAV41A0A0B4J266 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC-0.18□□□□□ -2.44
TRAV41A0A0B4J266 MIR3145-201ENST00000580727 82 ntBASIC-0.18□□□□□ -2.44
TRAV41A0A0B4J266 MIR4423-201ENST00000580922 80 ntBASIC-0.18□□□□□ -2.44
TRAV41A0A0B4J266 AP000942.4-201ENST00000604811 241 ntBASIC-0.18□□□□□ -2.44
TRAV41A0A0B4J266 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC-0.18□□□□□ -2.44
TRAV41A0A0B4J266 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC-0.18□□□□□ -2.44
TRAV41A0A0B4J266 PISRT1.1-201ENST00000616930 107 ntBASIC-0.18□□□□□ -2.44
TRAV41A0A0B4J266 AC022306.2-201ENST00000617563 647 ntBASIC-0.18□□□□□ -2.44
TRAV41A0A0B4J266 U6.92-201ENST00000636464 89 ntBASIC-0.18□□□□□ -2.44
TRAV41A0A0B4J266 AL669831.3-213ENST00000636676 183 ntBASIC-0.18□□□□□ -2.44
TRAV41A0A0B4J266 TPTEP1-208ENST00000636884 213 ntBASIC-0.18□□□□□ -2.44
TRAV41A0A0B4J266 SNORD115-34-201ENST00000362441 82 ntBASIC-0.19□□□□□ -2.44
TRAV41A0A0B4J266 RNU6-1115P-201ENST00000362490 106 ntBASIC-0.19□□□□□ -2.44
TRAV41A0A0B4J266 SNORD115-12-201ENST00000362583 82 ntBASIC-0.19□□□□□ -2.44
TRAV41A0A0B4J266 SNORD115-29-201ENST00000362834 82 ntBASIC-0.19□□□□□ -2.44
TRAV41A0A0B4J266 SNORD115-9-201ENST00000362912 82 ntBASIC-0.19□□□□□ -2.44
TRAV41A0A0B4J266 SNORD115-21-201ENST00000362963 81 ntBASIC-0.19□□□□□ -2.44
TRAV41A0A0B4J266 SNORD115-14-201ENST00000363090 81 ntBASIC-0.19□□□□□ -2.44
TRAV41A0A0B4J266 SNORD115-13-201ENST00000363358 82 ntBASIC-0.19□□□□□ -2.44
TRAV41A0A0B4J266 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.19□□□□□ -2.44
TRAV41A0A0B4J266 SNORD115-41-201ENST00000363608 82 ntBASIC-0.19□□□□□ -2.44
TRAV41A0A0B4J266 SNORD115-11-201ENST00000363616 82 ntBASIC-0.19□□□□□ -2.44
TRAV41A0A0B4J266 SNORD115-5-201ENST00000363633 82 ntBASIC-0.19□□□□□ -2.44
TRAV41A0A0B4J266 SNORD115-39-201ENST00000363694 82 ntBASIC-0.19□□□□□ -2.44
TRAV41A0A0B4J266 SNORD115-4-201ENST00000363810 82 ntBASIC-0.19□□□□□ -2.44
TRAV41A0A0B4J266 RNU6-674P-201ENST00000363831 107 ntBASIC-0.19□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 170.1 ms