Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 RNU6-381P-201ENST00000391259 108 ntBASIC1.42□□□□□ -2.18
SIX2Q9NPC8 U8.16-201ENST00000391279 133 ntBASIC1.42□□□□□ -2.18
SIX2Q9NPC8 RNU4-62P-201ENST00000410125 130 ntBASIC1.42□□□□□ -2.18
SIX2Q9NPC8 MLLT10P1-201ENST00000418346 262 ntBASIC1.42□□□□□ -2.18
SIX2Q9NPC8 PGBD4P5-201ENST00000445958 426 ntBASIC1.42□□□□□ -2.18
SIX2Q9NPC8 RPS29P23-201ENST00000458635 123 ntBASIC1.42□□□□□ -2.18
SIX2Q9NPC8 NDUFA4P2-201ENST00000489989 244 ntBASIC1.42□□□□□ -2.18
SIX2Q9NPC8 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.42□□□□□ -2.18
SIX2Q9NPC8 RNA5SP168-201ENST00000516642 112 ntBASIC1.42□□□□□ -2.18
SIX2Q9NPC8 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.42□□□□□ -2.18
SIX2Q9NPC8 AC104984.5-201ENST00000586878 94 ntBASIC1.42□□□□□ -2.18
SIX2Q9NPC8 AC095038.3-201ENST00000634439 195 ntBASIC1.42□□□□□ -2.18
SIX2Q9NPC8 MIR424-201ENST00000362227 98 ntBASIC1.41□□□□□ -2.18
SIX2Q9NPC8 RNU6-1318P-201ENST00000365389 103 ntBASIC1.41□□□□□ -2.18
SIX2Q9NPC8 RNU6-493P-201ENST00000391321 108 ntBASIC1.41□□□□□ -2.18
SIX2Q9NPC8 MIR1267-201ENST00000408723 78 ntBASIC1.41□□□□□ -2.18
SIX2Q9NPC8 RPL30P13-201ENST00000418873 348 ntBASIC1.41□□□□□ -2.18
SIX2Q9NPC8 Y_RNA.714-201ENST00000517065 90 ntBASIC1.41□□□□□ -2.18
SIX2Q9NPC8 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
SIX2Q9NPC8 AC120024.3-201ENST00000603167 156 ntBASIC1.41□□□□□ -2.18
SIX2Q9NPC8 AC090425.1-201ENST00000610007 140 ntBASIC1.41□□□□□ -2.18
SIX2Q9NPC8 MIR8074-201ENST00000615081 81 ntBASIC1.41□□□□□ -2.18
SIX2Q9NPC8 ZNF209P-201ENST00000593450 2304 ntBASIC1.4□□□□□ -2.18
SIX2Q9NPC8 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.18
SIX2Q9NPC8 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
SIX2Q9NPC8 RNU6-1123P-201ENST00000362347 106 ntBASIC1.4□□□□□ -2.19
SIX2Q9NPC8 RNU6-200P-201ENST00000364743 107 ntBASIC1.4□□□□□ -2.19
SIX2Q9NPC8 RNU6-923P-201ENST00000364753 107 ntBASIC1.4□□□□□ -2.19
SIX2Q9NPC8 MIR660-201ENST00000385235 97 ntBASIC1.4□□□□□ -2.19
SIX2Q9NPC8 snoU13.23-201ENST00000458863 104 ntBASIC1.4□□□□□ -2.19
SIX2Q9NPC8 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.4□□□□□ -2.19
SIX2Q9NPC8 CYCTP-201ENST00000504253 315 ntBASIC1.4□□□□□ -2.19
SIX2Q9NPC8 RNU6-138P-201ENST00000515952 107 ntBASIC1.4□□□□□ -2.19
SIX2Q9NPC8 RN7SKP164-201ENST00000516138 266 ntBASIC1.4□□□□□ -2.19
SIX2Q9NPC8 RNU6-1116P-201ENST00000517269 99 ntBASIC1.4□□□□□ -2.19
SIX2Q9NPC8 DNAJC19P9-201ENST00000555084 351 ntBASIC1.4□□□□□ -2.19
SIX2Q9NPC8 SNORA77B-201ENST00000578179 125 ntBASIC1.4□□□□□ -2.19
SIX2Q9NPC8 MIR4308-201ENST00000580634 81 ntBASIC1.4□□□□□ -2.19
SIX2Q9NPC8 MIR3660-201ENST00000584845 100 ntBASIC1.4□□□□□ -2.19
SIX2Q9NPC8 AC087685.1-201ENST00000587507 141 ntBASIC1.4□□□□□ -2.19
SIX2Q9NPC8 Z83818.1-201ENST00000603584 150 ntBASIC1.4□□□□□ -2.19
SIX2Q9NPC8 AL391903.3-201ENST00000612158 163 ntBASIC1.4□□□□□ -2.19
SIX2Q9NPC8 MIR6715A-201ENST00000615929 79 ntBASIC1.4□□□□□ -2.19
SIX2Q9NPC8 AC027279.3-201ENST00000625055 122 ntBASIC1.4□□□□□ -2.19
SIX2Q9NPC8 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
SIX2Q9NPC8 Y_RNA.297-201ENST00000364950 91 ntBASIC1.39□□□□□ -2.19
SIX2Q9NPC8 MIR30A-201ENST00000385092 71 ntBASIC1.39□□□□□ -2.19
SIX2Q9NPC8 MIR616-201ENST00000385293 97 ntBASIC1.39□□□□□ -2.19
SIX2Q9NPC8 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.39□□□□□ -2.19
SIX2Q9NPC8 AC004965.1-201ENST00000413033 213 ntBASIC1.39□□□□□ -2.19
SIX2Q9NPC8 PIGPP3-201ENST00000425307 415 ntBASIC1.39□□□□□ -2.19
SIX2Q9NPC8 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.39□□□□□ -2.19
SIX2Q9NPC8 AC245047.8-201ENST00000456455 284 ntBASIC1.39□□□□□ -2.19
SIX2Q9NPC8 AC114811.1-201ENST00000507207 168 ntBASIC1.39□□□□□ -2.19
SIX2Q9NPC8 SCARNA8-201ENST00000515924 131 ntBASIC1.39□□□□□ -2.19
SIX2Q9NPC8 RNU6-453P-201ENST00000516819 85 ntBASIC1.39□□□□□ -2.19
SIX2Q9NPC8 RNU6-794P-201ENST00000517261 64 ntBASIC1.39□□□□□ -2.19
SIX2Q9NPC8 AC015712.3-201ENST00000559380 164 ntBASIC1.39□□□□□ -2.19
SIX2Q9NPC8 AL049861.1-201ENST00000603130 150 ntBASIC1.39□□□□□ -2.19
SIX2Q9NPC8 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.39□□□□□ -2.19
SIX2Q9NPC8 uc_338.4-201ENST00000616635 176 ntBASIC1.39□□□□□ -2.19
SIX2Q9NPC8 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.39□□□□□ -2.19
SIX2Q9NPC8 SNORD3E-202ENST00000627253 216 ntBASIC1.39□□□□□ -2.19
SIX2Q9NPC8 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.38□□□□□ -2.19
SIX2Q9NPC8 RNU6-833P-201ENST00000363486 107 ntBASIC1.38□□□□□ -2.19
SIX2Q9NPC8 SNORD50B-201ENST00000364995 70 ntBASIC1.38□□□□□ -2.19
SIX2Q9NPC8 snoU2-30.1-201ENST00000365012 70 ntBASIC1.38□□□□□ -2.19
SIX2Q9NPC8 RNU6-163P-201ENST00000384396 106 ntBASIC1.38□□□□□ -2.19
SIX2Q9NPC8 MT-TT-201ENST00000387460 66 ntBASIC1.38□□□□□ -2.19
SIX2Q9NPC8 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.38□□□□□ -2.19
SIX2Q9NPC8 AC023449.1-201ENST00000454464 154 ntBASIC1.38□□□□□ -2.19
SIX2Q9NPC8 AC005908.1-201ENST00000468701 347 ntBASIC1.38□□□□□ -2.19
SIX2Q9NPC8 RNU7-12P-201ENST00000516030 62 ntBASIC1.38□□□□□ -2.19
SIX2Q9NPC8 SNORD45.4-201ENST00000516629 73 ntBASIC1.38□□□□□ -2.19
SIX2Q9NPC8 SNORA44.1-201ENST00000517031 108 ntBASIC1.38□□□□□ -2.19
SIX2Q9NPC8 AC008507.4-201ENST00000585464 127 ntBASIC1.38□□□□□ -2.19
SIX2Q9NPC8 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.38□□□□□ -2.19
SIX2Q9NPC8 Y_RNA.7-201ENST00000362352 102 ntBASIC1.37□□□□□ -2.19
SIX2Q9NPC8 RNU6-1084P-201ENST00000362498 107 ntBASIC1.37□□□□□ -2.19
SIX2Q9NPC8 RNU6-103P-201ENST00000363686 107 ntBASIC1.37□□□□□ -2.19
SIX2Q9NPC8 RNU6-1138P-201ENST00000365359 106 ntBASIC1.37□□□□□ -2.19
SIX2Q9NPC8 RNU6-47P-201ENST00000383866 107 ntBASIC1.37□□□□□ -2.19
SIX2Q9NPC8 SNORD72-201ENST00000390994 80 ntBASIC1.37□□□□□ -2.19
SIX2Q9NPC8 SNORA40.6-201ENST00000391153 128 ntBASIC1.37□□□□□ -2.19
SIX2Q9NPC8 Y_RNA.587-201ENST00000391210 103 ntBASIC1.37□□□□□ -2.19
SIX2Q9NPC8 RNU6-918P-201ENST00000391219 106 ntBASIC1.37□□□□□ -2.19
SIX2Q9NPC8 MIR891A-201ENST00000401237 79 ntBASIC1.37□□□□□ -2.19
SIX2Q9NPC8 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.37□□□□□ -2.19
SIX2Q9NPC8 AC108059.2-201ENST00000434626 151 ntBASIC1.37□□□□□ -2.19
SIX2Q9NPC8 Y_RNA.644-201ENST00000459006 113 ntBASIC1.37□□□□□ -2.19
SIX2Q9NPC8 RNU7-95P-201ENST00000459222 64 ntBASIC1.37□□□□□ -2.19
SIX2Q9NPC8 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.37□□□□□ -2.19
SIX2Q9NPC8 SNORD77.4-201ENST00000516158 81 ntBASIC1.37□□□□□ -2.19
SIX2Q9NPC8 Y_RNA.674-201ENST00000516362 113 ntBASIC1.37□□□□□ -2.19
SIX2Q9NPC8 RNU6-1007P-201ENST00000516586 107 ntBASIC1.37□□□□□ -2.19
SIX2Q9NPC8 AC090821.2-201ENST00000523552 176 ntBASIC1.37□□□□□ -2.19
SIX2Q9NPC8 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.37□□□□□ -2.19
SIX2Q9NPC8 MIR4778-201ENST00000577635 80 ntBASIC1.37□□□□□ -2.19
SIX2Q9NPC8 MIR7843-201ENST00000622274 79 ntBASIC1.37□□□□□ -2.19
SIX2Q9NPC8 WWP1P1-201ENST00000466609 2769 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 187.6 ms