Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 Y_RNA.270-201ENST00000364693 104 ntBASIC1.94□□□□□ -2.1
NKX6-1P78426 RNU6-275P-201ENST00000364910 107 ntBASIC1.94□□□□□ -2.1
NKX6-1P78426 Y_RNA.432-201ENST00000384087 111 ntBASIC1.94□□□□□ -2.1
NKX6-1P78426 MIR660-201ENST00000385235 97 ntBASIC1.94□□□□□ -2.1
NKX6-1P78426 Y_RNA.662-201ENST00000516028 97 ntBASIC1.94□□□□□ -2.1
NKX6-1P78426 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.94□□□□□ -2.1
NKX6-1P78426 MRPS18CP4-201ENST00000535821 231 ntBASIC1.94□□□□□ -2.1
NKX6-1P78426 MIR219B-201ENST00000637023 88 ntBASIC1.94□□□□□ -2.1
NKX6-1P78426 RNU6-203P-201ENST00000384038 104 ntBASIC1.93□□□□□ -2.1
NKX6-1P78426 RNU6-439P-201ENST00000384188 106 ntBASIC1.93□□□□□ -2.1
NKX6-1P78426 SNORA64-201ENST00000384674 134 ntBASIC1.93□□□□□ -2.1
NKX6-1P78426 AC004965.1-201ENST00000413033 213 ntBASIC1.93□□□□□ -2.1
NKX6-1P78426 SNRPGP8-201ENST00000454064 226 ntBASIC1.93□□□□□ -2.1
NKX6-1P78426 RNU6-1116P-201ENST00000517269 99 ntBASIC1.93□□□□□ -2.1
NKX6-1P78426 U6.106-201ENST00000636360 105 ntBASIC1.93□□□□□ -2.1
NKX6-1P78426 Y_RNA.4-201ENST00000362333 112 ntBASIC1.92□□□□□ -2.1
NKX6-1P78426 Y_RNA.23-201ENST00000362496 106 ntBASIC1.92□□□□□ -2.1
NKX6-1P78426 Y_RNA.412-201ENST00000384001 104 ntBASIC1.92□□□□□ -2.1
NKX6-1P78426 MIR15B-201ENST00000385045 98 ntBASIC1.92□□□□□ -2.1
NKX6-1P78426 MIR221-201ENST00000385135 110 ntBASIC1.92□□□□□ -2.1
NKX6-1P78426 MIR676-201ENST00000390702 67 ntBASIC1.92□□□□□ -2.1
NKX6-1P78426 RNU2-70P-201ENST00000410718 179 ntBASIC1.92□□□□□ -2.1
NKX6-1P78426 RNU6-1219P-201ENST00000516143 112 ntBASIC1.92□□□□□ -2.1
NKX6-1P78426 RNU6-861P-201ENST00000516745 106 ntBASIC1.92□□□□□ -2.1
NKX6-1P78426 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.92□□□□□ -2.1
NKX6-1P78426 AL096840.1-201ENST00000603287 93 ntBASIC1.92□□□□□ -2.1
NKX6-1P78426 AC009831.4-201ENST00000620744 325 ntBASIC1.92□□□□□ -2.1
NKX6-1P78426 ICE2P2-201ENST00000483823 2787 ntBASIC1.92□□□□□ -2.1
NKX6-1P78426 SNORD45.3-201ENST00000363836 72 ntBASIC1.91□□□□□ -2.1
NKX6-1P78426 MIR30A-201ENST00000385092 71 ntBASIC1.91□□□□□ -2.1
NKX6-1P78426 SNORD72-201ENST00000390994 80 ntBASIC1.91□□□□□ -2.1
NKX6-1P78426 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
NKX6-1P78426 AC079804.2-201ENST00000490376 200 ntBASIC1.91□□□□□ -2.1
NKX6-1P78426 RNA5SP200-201ENST00000516360 103 ntBASIC1.91□□□□□ -2.1
NKX6-1P78426 RNA5SP153-201ENST00000516498 76 ntBASIC1.91□□□□□ -2.1
NKX6-1P78426 RNU6-295P-201ENST00000516901 104 ntBASIC1.91□□□□□ -2.1
NKX6-1P78426 RNU6-365P-201ENST00000517113 106 ntBASIC1.91□□□□□ -2.1
NKX6-1P78426 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
NKX6-1P78426 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.1
NKX6-1P78426 Y_RNA.240-201ENST00000364469 95 ntBASIC1.9□□□□□ -2.11
NKX6-1P78426 Y_RNA.357-201ENST00000365487 109 ntBASIC1.9□□□□□ -2.11
NKX6-1P78426 SNORA67.3-201ENST00000384366 140 ntBASIC1.9□□□□□ -2.11
NKX6-1P78426 SNORD38C-201ENST00000384381 69 ntBASIC1.9□□□□□ -2.11
NKX6-1P78426 MIR194-1-201ENST00000384892 85 ntBASIC1.9□□□□□ -2.11
NKX6-1P78426 RNU4-43P-201ENST00000410628 137 ntBASIC1.9□□□□□ -2.11
NKX6-1P78426 MIR514B-201ENST00000516774 80 ntBASIC1.9□□□□□ -2.11
NKX6-1P78426 RNA5SP364-201ENST00000516938 78 ntBASIC1.9□□□□□ -2.11
NKX6-1P78426 MIR4778-201ENST00000577635 80 ntBASIC1.9□□□□□ -2.11
NKX6-1P78426 AC103810.8-201ENST00000607347 118 ntBASIC1.9□□□□□ -2.11
NKX6-1P78426 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.9□□□□□ -2.11
NKX6-1P78426 FTX_2.1-201ENST00000618816 94 ntBASIC1.9□□□□□ -2.11
NKX6-1P78426 AC092881.1-201ENST00000638218 2733 ntBASIC1.9□□□□□ -2.11
NKX6-1P78426 RNU6-682P-201ENST00000363843 106 ntBASIC1.89□□□□□ -2.11
NKX6-1P78426 Y_RNA.486-201ENST00000384398 107 ntBASIC1.89□□□□□ -2.11
NKX6-1P78426 MIR452-201ENST00000385020 85 ntBASIC1.89□□□□□ -2.11
NKX6-1P78426 HMGN2P38-201ENST00000423806 265 ntBASIC1.89□□□□□ -2.11
NKX6-1P78426 AC093850.1-201ENST00000454121 251 ntBASIC1.89□□□□□ -2.11
NKX6-1P78426 snoU13.9-201ENST00000458927 103 ntBASIC1.89□□□□□ -2.11
NKX6-1P78426 RNU6-197P-201ENST00000516680 100 ntBASIC1.89□□□□□ -2.11
NKX6-1P78426 SUMO2P16-201ENST00000519475 264 ntBASIC1.89□□□□□ -2.11
NKX6-1P78426 AL160236.1-201ENST00000556317 195 ntBASIC1.89□□□□□ -2.11
NKX6-1P78426 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.89□□□□□ -2.11
NKX6-1P78426 MIR4431-201ENST00000579990 94 ntBASIC1.89□□□□□ -2.11
NKX6-1P78426 MIR6132-201ENST00000622083 109 ntBASIC1.89□□□□□ -2.11
NKX6-1P78426 AC095038.3-201ENST00000634439 195 ntBASIC1.89□□□□□ -2.11
NKX6-1P78426 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
NKX6-1P78426 RNU6-199P-201ENST00000362954 107 ntBASIC1.88□□□□□ -2.11
NKX6-1P78426 RNA5SP259-201ENST00000365541 109 ntBASIC1.88□□□□□ -2.11
NKX6-1P78426 RNU6-484P-201ENST00000384016 107 ntBASIC1.88□□□□□ -2.11
NKX6-1P78426 Y_RNA.555-201ENST00000384673 110 ntBASIC1.88□□□□□ -2.11
NKX6-1P78426 MIR513A1-201ENST00000385138 129 ntBASIC1.88□□□□□ -2.11
NKX6-1P78426 SNORA48.3-201ENST00000391081 134 ntBASIC1.88□□□□□ -2.11
NKX6-1P78426 RN7SKP51-201ENST00000410781 304 ntBASIC1.88□□□□□ -2.11
NKX6-1P78426 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.88□□□□□ -2.11
NKX6-1P78426 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.88□□□□□ -2.11
NKX6-1P78426 AC108729.3-201ENST00000513484 108 ntBASIC1.88□□□□□ -2.11
NKX6-1P78426 RNU6-561P-201ENST00000516222 102 ntBASIC1.88□□□□□ -2.11
NKX6-1P78426 RNU6-504P-201ENST00000516568 104 ntBASIC1.88□□□□□ -2.11
NKX6-1P78426 MIR3198-2-201ENST00000577868 80 ntBASIC1.88□□□□□ -2.11
NKX6-1P78426 AP000942.3-201ENST00000603702 160 ntBASIC1.88□□□□□ -2.11
NKX6-1P78426 AC006441.5-201ENST00000612680 209 ntBASIC1.88□□□□□ -2.11
NKX6-1P78426 AP000553.5-201ENST00000641933 54 ntBASIC1.88□□□□□ -2.11
NKX6-1P78426 Y_RNA.226-201ENST00000364337 114 ntBASIC1.87□□□□□ -2.11
NKX6-1P78426 Y_RNA.634-201ENST00000364811 113 ntBASIC1.87□□□□□ -2.11
NKX6-1P78426 RNU6-643P-201ENST00000384018 107 ntBASIC1.87□□□□□ -2.11
NKX6-1P78426 SNORA26.9-201ENST00000391322 122 ntBASIC1.87□□□□□ -2.11
NKX6-1P78426 RNU2-40P-201ENST00000410833 196 ntBASIC1.87□□□□□ -2.11
NKX6-1P78426 RNA5SP489-201ENST00000410986 109 ntBASIC1.87□□□□□ -2.11
NKX6-1P78426 AL161935.2-201ENST00000414627 60 ntBASIC1.87□□□□□ -2.11
NKX6-1P78426 AC104435.1-201ENST00000483483 166 ntBASIC1.87□□□□□ -2.11
NKX6-1P78426 AC005840.1-201ENST00000498412 377 ntBASIC1.87□□□□□ -2.11
NKX6-1P78426 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.87□□□□□ -2.11
NKX6-1P78426 SNORA77B-201ENST00000578179 125 ntBASIC1.87□□□□□ -2.11
NKX6-1P78426 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
NKX6-1P78426 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
NKX6-1P78426 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
NKX6-1P78426 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
NKX6-1P78426 Y_RNA.150-201ENST00000363562 102 ntBASIC1.86□□□□□ -2.11
NKX6-1P78426 RNU6-268P-201ENST00000364174 107 ntBASIC1.86□□□□□ -2.11
NKX6-1P78426 RNA5SP138-201ENST00000365098 114 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 189.5 ms