Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 HMGN2P19-201ENST00000425149 265 ntBASIC2.01□□□□□ -2.09
MMP13P45452 YWHAEP4-201ENST00000505390 198 ntBASIC2.01□□□□□ -2.09
MMP13P45452 MRPS17P9-201ENST00000511924 393 ntBASIC2.01□□□□□ -2.09
MMP13P45452 MIR3169-201ENST00000578032 83 ntBASIC2.01□□□□□ -2.09
MMP13P45452 AL353149.1-201ENST00000610667 244 ntBASIC2.01□□□□□ -2.09
MMP13P45452 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.01□□□□□ -2.09
MMP13P45452 Pinc.1-201ENST00000616452 154 ntBASIC2.01□□□□□ -2.09
MMP13P45452 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
MMP13P45452 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2□□□□□ -2.09
MMP13P45452 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2□□□□□ -2.09
MMP13P45452 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2□□□□□ -2.09
MMP13P45452 RNU6-862P-201ENST00000362804 105 ntBASIC2□□□□□ -2.09
MMP13P45452 RNA5SP493-201ENST00000364115 91 ntBASIC2□□□□□ -2.09
MMP13P45452 SNORD50B-201ENST00000364995 70 ntBASIC2□□□□□ -2.09
MMP13P45452 RNU6-1138P-201ENST00000365359 106 ntBASIC2□□□□□ -2.09
MMP13P45452 RNU6-44P-201ENST00000384045 107 ntBASIC2□□□□□ -2.09
MMP13P45452 SNORA1-201ENST00000384107 130 ntBASIC2□□□□□ -2.09
MMP13P45452 SRIP3-201ENST00000413200 219 ntBASIC2□□□□□ -2.09
MMP13P45452 AL158823.1-201ENST00000418441 478 ntBASIC2□□□□□ -2.09
MMP13P45452 AC233266.1-201ENST00000454518 96 ntBASIC2□□□□□ -2.09
MMP13P45452 RNU4-57P-201ENST00000515980 135 ntBASIC2□□□□□ -2.09
MMP13P45452 RNA5SP153-201ENST00000516498 76 ntBASIC2□□□□□ -2.09
MMP13P45452 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2□□□□□ -2.09
MMP13P45452 AC242852.1-201ENST00000612151 96 ntBASIC2□□□□□ -2.09
MMP13P45452 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2□□□□□ -2.09
MMP13P45452 TUG1_4.1-201ENST00000619464 181 ntBASIC2□□□□□ -2.09
MMP13P45452 AC244015.1-201ENST00000622301 99 ntBASIC2□□□□□ -2.09
MMP13P45452 MIR6079-201ENST00000635807 62 ntBASIC2□□□□□ -2.09
MMP13P45452 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2□□□□□ -2.09
MMP13P45452 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2□□□□□ -2.09
MMP13P45452 SNORA1B-201ENST00000362535 133 ntBASIC1.99□□□□□ -2.09
MMP13P45452 Y_RNA.99-201ENST00000363138 105 ntBASIC1.99□□□□□ -2.09
MMP13P45452 Y_RNA.267-201ENST00000364679 109 ntBASIC1.99□□□□□ -2.09
MMP13P45452 MIR539-201ENST00000365690 78 ntBASIC1.99□□□□□ -2.09
MMP13P45452 RNU6-429P-201ENST00000384582 108 ntBASIC1.99□□□□□ -2.09
MMP13P45452 MIR548A2-201ENST00000384956 97 ntBASIC1.99□□□□□ -2.09
MMP13P45452 Y_RNA.584-201ENST00000391090 114 ntBASIC1.99□□□□□ -2.09
MMP13P45452 MLLT10P1-201ENST00000418346 262 ntBASIC1.99□□□□□ -2.09
MMP13P45452 AC010154.1-201ENST00000425857 269 ntBASIC1.99□□□□□ -2.09
MMP13P45452 SNRPGP10-201ENST00000432323 225 ntBASIC1.99□□□□□ -2.09
MMP13P45452 RPS27P21-201ENST00000486977 252 ntBASIC1.99□□□□□ -2.09
MMP13P45452 SNRPGP19-201ENST00000603826 189 ntBASIC1.99□□□□□ -2.09
MMP13P45452 U7.2-201ENST00000607576 63 ntBASIC1.99□□□□□ -2.09
MMP13P45452 AL591926.4-201ENST00000616895 298 ntBASIC1.99□□□□□ -2.09
MMP13P45452 MIR376A2-201ENST00000636782 80 ntBASIC1.99□□□□□ -2.09
MMP13P45452 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.99□□□□□ -2.09
MMP13P45452 ZNF355P-201ENST00000427301 3216 ntBASIC1.98□□□□□ -2.09
MMP13P45452 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
MMP13P45452 AC018630.2-201ENST00000534866 2403 ntBASIC1.98□□□□□ -2.09
MMP13P45452 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.98□□□□□ -2.09
MMP13P45452 RNU6-309P-201ENST00000364573 106 ntBASIC1.98□□□□□ -2.09
MMP13P45452 MIR518A2-201ENST00000384966 87 ntBASIC1.98□□□□□ -2.09
MMP13P45452 MIR520G-201ENST00000385064 90 ntBASIC1.98□□□□□ -2.09
MMP13P45452 MIR29C-201ENST00000385231 88 ntBASIC1.98□□□□□ -2.09
MMP13P45452 SNORA40.5-201ENST00000391061 128 ntBASIC1.98□□□□□ -2.09
MMP13P45452 SNORA79-201ENST00000408376 140 ntBASIC1.98□□□□□ -2.09
MMP13P45452 RNU2-70P-201ENST00000410718 179 ntBASIC1.98□□□□□ -2.09
MMP13P45452 Y_RNA.621-201ENST00000411065 96 ntBASIC1.98□□□□□ -2.09
MMP13P45452 RNA5SP450-201ENST00000411206 102 ntBASIC1.98□□□□□ -2.09
MMP13P45452 Y_RNA.630-201ENST00000411370 108 ntBASIC1.98□□□□□ -2.09
MMP13P45452 AC245047.4-201ENST00000433189 144 ntBASIC1.98□□□□□ -2.09
MMP13P45452 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.98□□□□□ -2.09
MMP13P45452 ATP5J2P3-201ENST00000451550 258 ntBASIC1.98□□□□□ -2.09
MMP13P45452 RNU1-131P-201ENST00000458943 161 ntBASIC1.98□□□□□ -2.09
MMP13P45452 RNA5SP233-201ENST00000459153 113 ntBASIC1.98□□□□□ -2.09
MMP13P45452 RPS26P45-201ENST00000471748 340 ntBASIC1.98□□□□□ -2.09
MMP13P45452 HMGN1P7-201ENST00000491722 313 ntBASIC1.98□□□□□ -2.09
MMP13P45452 OR9P1P-201ENST00000496431 281 ntBASIC1.98□□□□□ -2.09
MMP13P45452 AL163195.1-201ENST00000496941 348 ntBASIC1.98□□□□□ -2.09
MMP13P45452 RNU6-341P-201ENST00000516973 96 ntBASIC1.98□□□□□ -2.09
MMP13P45452 MIR2681-201ENST00000581814 105 ntBASIC1.98□□□□□ -2.09
MMP13P45452 AC022217.4-201ENST00000604389 163 ntBASIC1.98□□□□□ -2.09
MMP13P45452 AC012493.3-201ENST00000604494 112 ntBASIC1.98□□□□□ -2.09
MMP13P45452 AL359075.3-201ENST00000613288 217 ntBASIC1.98□□□□□ -2.09
MMP13P45452 SNORA25.7-201ENST00000364375 127 ntBASIC1.97□□□□□ -2.09
MMP13P45452 Y_RNA.273-201ENST00000364703 102 ntBASIC1.97□□□□□ -2.09
MMP13P45452 SNORD61-201ENST00000384252 73 ntBASIC1.97□□□□□ -2.09
MMP13P45452 Y_RNA.563-201ENST00000384707 108 ntBASIC1.97□□□□□ -2.09
MMP13P45452 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.97□□□□□ -2.09
MMP13P45452 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
MMP13P45452 MIR4287-201ENST00000579398 78 ntBASIC1.97□□□□□ -2.09
MMP13P45452 MIR3121-201ENST00000579680 77 ntBASIC1.97□□□□□ -2.09
MMP13P45452 MIR3945-201ENST00000581853 98 ntBASIC1.97□□□□□ -2.09
MMP13P45452 AC008507.4-201ENST00000585464 127 ntBASIC1.97□□□□□ -2.09
MMP13P45452 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
MMP13P45452 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
MMP13P45452 Y_RNA.52-201ENST00000362760 96 ntBASIC1.96□□□□□ -2.1
MMP13P45452 SNORA8-201ENST00000384574 139 ntBASIC1.96□□□□□ -2.1
MMP13P45452 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.96□□□□□ -2.1
MMP13P45452 Y_RNA.651-201ENST00000459380 103 ntBASIC1.96□□□□□ -2.1
MMP13P45452 RN7SL429P-201ENST00000479090 223 ntBASIC1.96□□□□□ -2.1
MMP13P45452 RN7SL489P-201ENST00000486185 223 ntBASIC1.96□□□□□ -2.1
MMP13P45452 RN7SL327P-201ENST00000488659 223 ntBASIC1.96□□□□□ -2.1
MMP13P45452 RNU6-772P-201ENST00000516042 105 ntBASIC1.96□□□□□ -2.1
MMP13P45452 Y_RNA.666-201ENST00000516187 112 ntBASIC1.96□□□□□ -2.1
MMP13P45452 RNU6-1146P-201ENST00000516282 102 ntBASIC1.96□□□□□ -2.1
MMP13P45452 AC090142.3-201ENST00000519012 385 ntBASIC1.96□□□□□ -2.1
MMP13P45452 IGKV1-22-201ENST00000524313 326 ntBASIC1.96□□□□□ -2.1
MMP13P45452 AC131055.1-201ENST00000584626 316 ntBASIC1.96□□□□□ -2.1
MMP13P45452 AL359881.1-201ENST00000602916 267 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 168.5 ms