Protein–RNA interactions for Protein: Q9N2J8

HERV-H_2q24.1 provirus ancestral Env polyprotein, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9N2J8 RNY3P16-201ENST00000516338 101 ntBASIC1.71□□□□□ -2.14
Q9N2J8 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.71□□□□□ -2.14
Q9N2J8 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
Q9N2J8 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
Q9N2J8 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
Q9N2J8 RNU6-1123P-201ENST00000362347 106 ntBASIC1.7□□□□□ -2.14
Q9N2J8 snoU2_19.4-201ENST00000364329 80 ntBASIC1.7□□□□□ -2.14
Q9N2J8 Y_RNA.242-201ENST00000364473 110 ntBASIC1.7□□□□□ -2.14
Q9N2J8 Y_RNA.274-201ENST00000364714 101 ntBASIC1.7□□□□□ -2.14
Q9N2J8 Y_RNA.297-201ENST00000364950 91 ntBASIC1.7□□□□□ -2.14
Q9N2J8 Y_RNA.572-201ENST00000384757 98 ntBASIC1.7□□□□□ -2.14
Q9N2J8 MIR616-201ENST00000385293 97 ntBASIC1.7□□□□□ -2.14
Q9N2J8 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
Q9N2J8 U8.16-201ENST00000391279 133 ntBASIC1.7□□□□□ -2.14
Q9N2J8 RNU6-493P-201ENST00000391321 108 ntBASIC1.7□□□□□ -2.14
Q9N2J8 CALM2P4-201ENST00000430810 426 ntBASIC1.7□□□□□ -2.14
Q9N2J8 AL138752.1-201ENST00000452964 351 ntBASIC1.7□□□□□ -2.14
Q9N2J8 RN7SL274P-201ENST00000492268 272 ntBASIC1.7□□□□□ -2.14
Q9N2J8 RNU6-138P-201ENST00000515952 107 ntBASIC1.7□□□□□ -2.14
Q9N2J8 RNA5SP168-201ENST00000516642 112 ntBASIC1.7□□□□□ -2.14
Q9N2J8 Y_RNA.700-201ENST00000516806 100 ntBASIC1.7□□□□□ -2.14
Q9N2J8 SNORA44.1-201ENST00000517031 108 ntBASIC1.7□□□□□ -2.14
Q9N2J8 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
Q9N2J8 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
Q9N2J8 AC120024.3-201ENST00000603167 156 ntBASIC1.7□□□□□ -2.14
Q9N2J8 AC103810.8-201ENST00000607347 118 ntBASIC1.7□□□□□ -2.14
Q9N2J8 AL391903.3-201ENST00000612158 163 ntBASIC1.7□□□□□ -2.14
Q9N2J8 MIR8074-201ENST00000615081 81 ntBASIC1.7□□□□□ -2.14
Q9N2J8 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
Q9N2J8 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.69□□□□□ -2.14
Q9N2J8 MIR424-201ENST00000362227 98 ntBASIC1.69□□□□□ -2.14
Q9N2J8 RNU6-1084P-201ENST00000362498 107 ntBASIC1.69□□□□□ -2.14
Q9N2J8 RNU6-1020P-201ENST00000363684 107 ntBASIC1.69□□□□□ -2.14
Q9N2J8 RNU6-923P-201ENST00000364753 107 ntBASIC1.69□□□□□ -2.14
Q9N2J8 RNU6-163P-201ENST00000384396 106 ntBASIC1.69□□□□□ -2.14
Q9N2J8 AC108059.2-201ENST00000434626 151 ntBASIC1.69□□□□□ -2.14
Q9N2J8 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.69□□□□□ -2.14
Q9N2J8 UBL5P3-201ENST00000475112 231 ntBASIC1.69□□□□□ -2.14
Q9N2J8 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.69□□□□□ -2.14
Q9N2J8 AL049861.1-201ENST00000603130 150 ntBASIC1.69□□□□□ -2.14
Q9N2J8 uc_338.4-201ENST00000616635 176 ntBASIC1.69□□□□□ -2.14
Q9N2J8 AC027279.3-201ENST00000625055 122 ntBASIC1.69□□□□□ -2.14
Q9N2J8 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.69□□□□□ -2.14
Q9N2J8 MIRLET7C-201ENST00000362160 84 ntBASIC1.68□□□□□ -2.14
Q9N2J8 Y_RNA.7-201ENST00000362352 102 ntBASIC1.68□□□□□ -2.14
Q9N2J8 RNU6-103P-201ENST00000363686 107 ntBASIC1.68□□□□□ -2.14
Q9N2J8 snoU2-30.1-201ENST00000365012 70 ntBASIC1.68□□□□□ -2.14
Q9N2J8 RNU6-203P-201ENST00000384038 104 ntBASIC1.68□□□□□ -2.14
Q9N2J8 RNY3P5-201ENST00000384127 102 ntBASIC1.68□□□□□ -2.14
Q9N2J8 MIR194-1-201ENST00000384892 85 ntBASIC1.68□□□□□ -2.14
Q9N2J8 MIR660-201ENST00000385235 97 ntBASIC1.68□□□□□ -2.14
Q9N2J8 AC245047.8-201ENST00000456455 284 ntBASIC1.68□□□□□ -2.14
Q9N2J8 NDUFA4P2-201ENST00000489989 244 ntBASIC1.68□□□□□ -2.14
Q9N2J8 RNU7-12P-201ENST00000516030 62 ntBASIC1.68□□□□□ -2.14
Q9N2J8 MIR3945-201ENST00000581853 98 ntBASIC1.68□□□□□ -2.14
Q9N2J8 SNORD3E-202ENST00000627253 216 ntBASIC1.68□□□□□ -2.14
Q9N2J8 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
Q9N2J8 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.67□□□□□ -2.14
Q9N2J8 Y_RNA.121-201ENST00000363309 113 ntBASIC1.67□□□□□ -2.14
Q9N2J8 MIR30A-201ENST00000385092 71 ntBASIC1.67□□□□□ -2.14
Q9N2J8 MIR802-201ENST00000390235 94 ntBASIC1.67□□□□□ -2.14
Q9N2J8 RNU6-1228P-201ENST00000391014 107 ntBASIC1.67□□□□□ -2.14
Q9N2J8 AC004965.1-201ENST00000413033 213 ntBASIC1.67□□□□□ -2.14
Q9N2J8 HMGN2P32-201ENST00000444648 269 ntBASIC1.67□□□□□ -2.14
Q9N2J8 Y_RNA.644-201ENST00000459006 113 ntBASIC1.67□□□□□ -2.14
Q9N2J8 RN7SL429P-201ENST00000479090 223 ntBASIC1.67□□□□□ -2.14
Q9N2J8 RN7SL489P-201ENST00000486185 223 ntBASIC1.67□□□□□ -2.14
Q9N2J8 RN7SL327P-201ENST00000488659 223 ntBASIC1.67□□□□□ -2.14
Q9N2J8 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.67□□□□□ -2.14
Q9N2J8 Y_RNA.674-201ENST00000516362 113 ntBASIC1.67□□□□□ -2.14
Q9N2J8 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.67□□□□□ -2.14
Q9N2J8 SNORD45.4-201ENST00000516629 73 ntBASIC1.67□□□□□ -2.14
Q9N2J8 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.67□□□□□ -2.14
Q9N2J8 MIR3618-201ENST00000580330 88 ntBASIC1.67□□□□□ -2.14
Q9N2J8 MIR4308-201ENST00000580634 81 ntBASIC1.67□□□□□ -2.14
Q9N2J8 RN7SL853P-201ENST00000617250 223 ntBASIC1.67□□□□□ -2.14
Q9N2J8 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.67□□□□□ -2.14
Q9N2J8 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.66□□□□□ -2.14
Q9N2J8 RNU6-833P-201ENST00000363486 107 ntBASIC1.66□□□□□ -2.14
Q9N2J8 SNORD14E-201ENST00000364009 85 ntBASIC1.66□□□□□ -2.14
Q9N2J8 Y_RNA.238-201ENST00000364441 102 ntBASIC1.66□□□□□ -2.14
Q9N2J8 SNORD50B-201ENST00000364995 70 ntBASIC1.66□□□□□ -2.14
Q9N2J8 RNU4-70P-201ENST00000384579 139 ntBASIC1.66□□□□□ -2.14
Q9N2J8 Y_RNA.587-201ENST00000391210 103 ntBASIC1.66□□□□□ -2.14
Q9N2J8 MIR891A-201ENST00000401237 79 ntBASIC1.66□□□□□ -2.14
Q9N2J8 Y_RNA.793-201ENST00000411222 111 ntBASIC1.66□□□□□ -2.14
Q9N2J8 AL161935.2-201ENST00000414627 60 ntBASIC1.66□□□□□ -2.14
Q9N2J8 PIGPP3-201ENST00000425307 415 ntBASIC1.66□□□□□ -2.14
Q9N2J8 AC003989.2-201ENST00000440224 169 ntBASIC1.66□□□□□ -2.14
Q9N2J8 AC114811.1-201ENST00000507207 168 ntBASIC1.66□□□□□ -2.14
Q9N2J8 SNORD77.4-201ENST00000516158 81 ntBASIC1.66□□□□□ -2.14
Q9N2J8 CBX3P4-201ENST00000538909 354 ntBASIC1.66□□□□□ -2.14
Q9N2J8 MIR4419B-201ENST00000577260 68 ntBASIC1.66□□□□□ -2.14
Q9N2J8 MIR4662B-201ENST00000579498 81 ntBASIC1.66□□□□□ -2.14
Q9N2J8 AC008507.4-201ENST00000585464 127 ntBASIC1.66□□□□□ -2.14
Q9N2J8 AC095038.3-201ENST00000634439 195 ntBASIC1.66□□□□□ -2.14
Q9N2J8 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.14
Q9N2J8 Y_RNA.336-201ENST00000365307 109 ntBASIC1.65□□□□□ -2.15
Q9N2J8 Y_RNA.435-201ENST00000384095 112 ntBASIC1.65□□□□□ -2.15
Q9N2J8 Y_RNA.785-201ENST00000384290 109 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 240 ms