Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 EIF1P4-201ENST00000572664 335 ntBASIC0.22□□□□□ -2.37
LRRC40Q9H9A6 MIR4771-2-201ENST00000577758 74 ntBASIC0.22□□□□□ -2.37
LRRC40Q9H9A6 MIR4771-1-201ENST00000582617 74 ntBASIC0.22□□□□□ -2.37
LRRC40Q9H9A6 Y_RNA.72-201ENST00000362894 103 ntBASIC0.21□□□□□ -2.38
LRRC40Q9H9A6 Y_RNA.116-201ENST00000363292 103 ntBASIC0.21□□□□□ -2.38
LRRC40Q9H9A6 SNORD45.3-201ENST00000363836 72 ntBASIC0.21□□□□□ -2.38
LRRC40Q9H9A6 Y_RNA.238-201ENST00000364441 102 ntBASIC0.21□□□□□ -2.38
LRRC40Q9H9A6 Y_RNA.341-201ENST00000365341 102 ntBASIC0.21□□□□□ -2.38
LRRC40Q9H9A6 RNU6-42P-201ENST00000384165 107 ntBASIC0.21□□□□□ -2.38
LRRC40Q9H9A6 RNY3P4-201ENST00000384428 101 ntBASIC0.21□□□□□ -2.38
LRRC40Q9H9A6 MCFD2P1-201ENST00000417812 300 ntBASIC0.21□□□□□ -2.38
LRRC40Q9H9A6 AC108740.1-201ENST00000498629 225 ntBASIC0.21□□□□□ -2.38
LRRC40Q9H9A6 RNU6-470P-201ENST00000515954 104 ntBASIC0.21□□□□□ -2.38
LRRC40Q9H9A6 RNU7-181P-201ENST00000517234 74 ntBASIC0.21□□□□□ -2.38
LRRC40Q9H9A6 MIR4791-201ENST00000607666 84 ntBASIC0.21□□□□□ -2.38
LRRC40Q9H9A6 AC011476.5-201ENST00000615594 130 ntBASIC0.21□□□□□ -2.38
LRRC40Q9H9A6 RNU6-268P-201ENST00000364174 107 ntBASIC0.2□□□□□ -2.38
LRRC40Q9H9A6 Y_RNA.436-201ENST00000384097 102 ntBASIC0.2□□□□□ -2.38
LRRC40Q9H9A6 RNU6-679P-201ENST00000391003 106 ntBASIC0.2□□□□□ -2.38
LRRC40Q9H9A6 AC015818.7-201ENST00000428754 109 ntBASIC0.2□□□□□ -2.38
LRRC40Q9H9A6 SNRPGP14-201ENST00000435400 219 ntBASIC0.2□□□□□ -2.38
LRRC40Q9H9A6 AC087499.7-201ENST00000441958 109 ntBASIC0.2□□□□□ -2.38
LRRC40Q9H9A6 RNA5SP436-201ENST00000516020 115 ntBASIC0.2□□□□□ -2.38
LRRC40Q9H9A6 RNU6-120P-201ENST00000516077 103 ntBASIC0.2□□□□□ -2.38
LRRC40Q9H9A6 RNU6-1213P-201ENST00000517075 94 ntBASIC0.2□□□□□ -2.38
LRRC40Q9H9A6 AC144568.1-201ENST00000520139 137 ntBASIC0.2□□□□□ -2.38
LRRC40Q9H9A6 SNORA4-201ENST00000584302 138 ntBASIC0.2□□□□□ -2.38
LRRC40Q9H9A6 MIR103A1-201ENST00000362165 78 ntBASIC0.19□□□□□ -2.38
LRRC40Q9H9A6 Y_RNA.3-201ENST00000362331 103 ntBASIC0.19□□□□□ -2.38
LRRC40Q9H9A6 RNU6-349P-201ENST00000362402 107 ntBASIC0.19□□□□□ -2.38
LRRC40Q9H9A6 Y_RNA.230-201ENST00000364348 109 ntBASIC0.19□□□□□ -2.38
LRRC40Q9H9A6 SNORA1.2-201ENST00000365189 134 ntBASIC0.19□□□□□ -2.38
LRRC40Q9H9A6 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.19□□□□□ -2.38
LRRC40Q9H9A6 MTND1P2-201ENST00000430604 821 ntBASIC0.19□□□□□ -2.38
LRRC40Q9H9A6 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.19□□□□□ -2.38
LRRC40Q9H9A6 Z83846.1-201ENST00000446798 265 ntBASIC0.19□□□□□ -2.38
LRRC40Q9H9A6 RNU7-169P-201ENST00000459456 61 ntBASIC0.19□□□□□ -2.38
LRRC40Q9H9A6 RPL23AP54-201ENST00000495129 419 ntBASIC0.19□□□□□ -2.38
LRRC40Q9H9A6 SCARNA8-201ENST00000515924 131 ntBASIC0.19□□□□□ -2.38
LRRC40Q9H9A6 SNORA25.12-201ENST00000516202 82 ntBASIC0.19□□□□□ -2.38
LRRC40Q9H9A6 RNU6-720P-201ENST00000516363 108 ntBASIC0.19□□□□□ -2.38
LRRC40Q9H9A6 RNU7-4P-201ENST00000516961 62 ntBASIC0.19□□□□□ -2.38
LRRC40Q9H9A6 MIR4659A-201ENST00000580269 81 ntBASIC0.19□□□□□ -2.38
LRRC40Q9H9A6 MIR4804-201ENST00000581683 73 ntBASIC0.19□□□□□ -2.38
LRRC40Q9H9A6 AC022441.3-201ENST00000605737 136 ntBASIC0.19□□□□□ -2.38
LRRC40Q9H9A6 AL669831.3-213ENST00000636676 183 ntBASIC0.19□□□□□ -2.38
LRRC40Q9H9A6 RNU6-1209P-201ENST00000363655 107 ntBASIC0.18□□□□□ -2.38
LRRC40Q9H9A6 Y_RNA.605-201ENST00000410577 105 ntBASIC0.18□□□□□ -2.38
LRRC40Q9H9A6 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC0.18□□□□□ -2.38
LRRC40Q9H9A6 MIR4264-201ENST00000583520 66 ntBASIC0.18□□□□□ -2.38
LRRC40Q9H9A6 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC0.18□□□□□ -2.38
LRRC40Q9H9A6 LARP7P1-201ENST00000605576 316 ntBASIC0.18□□□□□ -2.38
LRRC40Q9H9A6 uc_338.4-201ENST00000616635 176 ntBASIC0.18□□□□□ -2.38
LRRC40Q9H9A6 Y_RNA.310-201ENST00000365063 113 ntBASIC0.17□□□□□ -2.38
LRRC40Q9H9A6 RNU6-847P-201ENST00000411115 108 ntBASIC0.17□□□□□ -2.38
LRRC40Q9H9A6 AC024405.2-202ENST00000532731 184 ntBASIC0.17□□□□□ -2.38
LRRC40Q9H9A6 AC005730.3-201ENST00000583067 366 ntBASIC0.17□□□□□ -2.38
LRRC40Q9H9A6 MIR4676-201ENST00000583078 72 ntBASIC0.17□□□□□ -2.38
LRRC40Q9H9A6 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.17□□□□□ -2.38
LRRC40Q9H9A6 AC090517.2-201ENST00000614966 680 ntBASIC0.17□□□□□ -2.38
LRRC40Q9H9A6 SNORD44.1-201ENST00000363202 61 ntBASIC0.16□□□□□ -2.38
LRRC40Q9H9A6 Y_RNA.796-201ENST00000364268 102 ntBASIC0.16□□□□□ -2.38
LRRC40Q9H9A6 Y_RNA.799-201ENST00000364992 102 ntBASIC0.16□□□□□ -2.38
LRRC40Q9H9A6 Y_RNA.456-201ENST00000384232 111 ntBASIC0.16□□□□□ -2.38
LRRC40Q9H9A6 RNU6-125P-201ENST00000384505 107 ntBASIC0.16□□□□□ -2.38
LRRC40Q9H9A6 Y_RNA.516-201ENST00000384541 124 ntBASIC0.16□□□□□ -2.38
LRRC40Q9H9A6 MIR518E-201ENST00000385252 88 ntBASIC0.16□□□□□ -2.38
LRRC40Q9H9A6 AC016907.1-201ENST00000419483 435 ntBASIC0.16□□□□□ -2.38
LRRC40Q9H9A6 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.16□□□□□ -2.38
LRRC40Q9H9A6 RNU7-56P-201ENST00000458744 62 ntBASIC0.16□□□□□ -2.38
LRRC40Q9H9A6 RN7SKP295-201ENST00000517264 153 ntBASIC0.16□□□□□ -2.38
LRRC40Q9H9A6 AC022523.2-201ENST00000561045 150 ntBASIC0.16□□□□□ -2.38
LRRC40Q9H9A6 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.16□□□□□ -2.38
LRRC40Q9H9A6 MIR5188-201ENST00000583467 113 ntBASIC0.16□□□□□ -2.38
LRRC40Q9H9A6 AC008507.4-201ENST00000585464 127 ntBASIC0.16□□□□□ -2.38
LRRC40Q9H9A6 AC011712.1-201ENST00000588959 234 ntBASIC0.16□□□□□ -2.38
LRRC40Q9H9A6 AP003357.1-201ENST00000604497 148 ntBASIC0.16□□□□□ -2.38
LRRC40Q9H9A6 MIR518A1-201ENST00000385068 85 ntBASIC0.15□□□□□ -2.39
LRRC40Q9H9A6 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.15□□□□□ -2.39
LRRC40Q9H9A6 SNORD71-201ENST00000411292 86 ntBASIC0.15□□□□□ -2.39
LRRC40Q9H9A6 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.15□□□□□ -2.39
LRRC40Q9H9A6 SNRPGP12-201ENST00000449481 213 ntBASIC0.15□□□□□ -2.39
LRRC40Q9H9A6 MIR4431-201ENST00000579990 94 ntBASIC0.15□□□□□ -2.39
LRRC40Q9H9A6 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.15□□□□□ -2.39
LRRC40Q9H9A6 AC002553.4-201ENST00000616896 331 ntBASIC0.15□□□□□ -2.39
LRRC40Q9H9A6 RNA5SP62-201ENST00000363457 110 ntBASIC0.14□□□□□ -2.39
LRRC40Q9H9A6 RNY3P11-201ENST00000364153 102 ntBASIC0.14□□□□□ -2.39
LRRC40Q9H9A6 RNA5SP517-201ENST00000364724 117 ntBASIC0.14□□□□□ -2.39
LRRC40Q9H9A6 U8.7-201ENST00000364940 136 ntBASIC0.14□□□□□ -2.39
LRRC40Q9H9A6 RNU6-1175P-201ENST00000365200 107 ntBASIC0.14□□□□□ -2.39
LRRC40Q9H9A6 AL590004.1-201ENST00000405321 300 ntBASIC0.14□□□□□ -2.39
LRRC40Q9H9A6 MIR1277-201ENST00000408536 78 ntBASIC0.14□□□□□ -2.39
LRRC40Q9H9A6 SNORA40.8-201ENST00000411034 126 ntBASIC0.14□□□□□ -2.39
LRRC40Q9H9A6 AC005042.3-201ENST00000453230 174 ntBASIC0.14□□□□□ -2.39
LRRC40Q9H9A6 RNU6-718P-201ENST00000516166 105 ntBASIC0.14□□□□□ -2.39
LRRC40Q9H9A6 RNU7-115P-201ENST00000516433 55 ntBASIC0.14□□□□□ -2.39
LRRC40Q9H9A6 AC127455.1-201ENST00000565496 145 ntBASIC0.14□□□□□ -2.39
LRRC40Q9H9A6 MIR2681-201ENST00000581814 105 ntBASIC0.14□□□□□ -2.39
LRRC40Q9H9A6 AC020891.4-201ENST00000605745 93 ntBASIC0.14□□□□□ -2.39
LRRC40Q9H9A6 RNU6-623P-201ENST00000363143 105 ntBASIC0.13□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 235.4 ms