Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 LINC01399-202ENST00000458450 244 ntBASIC0.8□□□□□ -2.28
NPAS2Q99743 U8.20-201ENST00000459445 131 ntBASIC0.8□□□□□ -2.28
NPAS2Q99743 RPS26P48-201ENST00000491713 339 ntBASIC0.8□□□□□ -2.28
NPAS2Q99743 CYCTP-201ENST00000504253 315 ntBASIC0.8□□□□□ -2.28
NPAS2Q99743 RNU6-397P-201ENST00000516226 104 ntBASIC0.8□□□□□ -2.28
NPAS2Q99743 RNU6-1046P-201ENST00000516538 107 ntBASIC0.8□□□□□ -2.28
NPAS2Q99743 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
NPAS2Q99743 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.8□□□□□ -2.28
NPAS2Q99743 MIR5000-201ENST00000577717 103 ntBASIC0.8□□□□□ -2.28
NPAS2Q99743 MIR6779-201ENST00000617283 64 ntBASIC0.8□□□□□ -2.28
NPAS2Q99743 MTND4P29-201ENST00000503122 1372 ntBASIC0.8□□□□□ -2.28
NPAS2Q99743 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
NPAS2Q99743 RNU6-450P-201ENST00000364654 107 ntBASIC0.79□□□□□ -2.28
NPAS2Q99743 Y_RNA.310-201ENST00000365063 113 ntBASIC0.79□□□□□ -2.28
NPAS2Q99743 Y_RNA.341-201ENST00000365341 102 ntBASIC0.79□□□□□ -2.28
NPAS2Q99743 SNORD42.2-201ENST00000365570 69 ntBASIC0.79□□□□□ -2.28
NPAS2Q99743 SNORD14.1-201ENST00000365609 90 ntBASIC0.79□□□□□ -2.28
NPAS2Q99743 Y_RNA.395-201ENST00000383945 109 ntBASIC0.79□□□□□ -2.28
NPAS2Q99743 Y_RNA.551-201ENST00000384661 102 ntBASIC0.79□□□□□ -2.28
NPAS2Q99743 RNU6-21P-201ENST00000384710 107 ntBASIC0.79□□□□□ -2.28
NPAS2Q99743 RNU6-1105P-201ENST00000384774 107 ntBASIC0.79□□□□□ -2.28
NPAS2Q99743 MIR522-201ENST00000385071 87 ntBASIC0.79□□□□□ -2.28
NPAS2Q99743 MIR516B2-201ENST00000385190 85 ntBASIC0.79□□□□□ -2.28
NPAS2Q99743 MIR146A-201ENST00000385201 99 ntBASIC0.79□□□□□ -2.28
NPAS2Q99743 RNU6-351P-201ENST00000516097 100 ntBASIC0.79□□□□□ -2.28
NPAS2Q99743 ACA64.5-201ENST00000516207 127 ntBASIC0.79□□□□□ -2.28
NPAS2Q99743 CYP3A137P-201ENST00000562436 69 ntBASIC0.79□□□□□ -2.28
NPAS2Q99743 C8orf59P2-201ENST00000603441 271 ntBASIC0.79□□□□□ -2.28
NPAS2Q99743 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
NPAS2Q99743 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.79□□□□□ -2.28
NPAS2Q99743 AC008163.1-202ENST00000636004 2889 ntBASIC0.79□□□□□ -2.28
NPAS2Q99743 RNU4-50P-201ENST00000364361 141 ntBASIC0.78□□□□□ -2.28
NPAS2Q99743 U8.5-201ENST00000364528 136 ntBASIC0.78□□□□□ -2.28
NPAS2Q99743 RNU5E-4P-201ENST00000364931 120 ntBASIC0.78□□□□□ -2.28
NPAS2Q99743 Y_RNA.445-201ENST00000384168 102 ntBASIC0.78□□□□□ -2.28
NPAS2Q99743 SNORA72-201ENST00000384339 132 ntBASIC0.78□□□□□ -2.28
NPAS2Q99743 MIR608-201ENST00000384820 100 ntBASIC0.78□□□□□ -2.28
NPAS2Q99743 Y_RNA.645-201ENST00000391229 102 ntBASIC0.78□□□□□ -2.28
NPAS2Q99743 MIR1302-11-201ENST00000408051 138 ntBASIC0.78□□□□□ -2.28
NPAS2Q99743 MIR1302-9-201ENST00000408365 138 ntBASIC0.78□□□□□ -2.28
NPAS2Q99743 MIR1302-10-201ENST00000408734 138 ntBASIC0.78□□□□□ -2.28
NPAS2Q99743 MIR1298-201ENST00000408783 112 ntBASIC0.78□□□□□ -2.28
NPAS2Q99743 AC022028.1-201ENST00000412054 408 ntBASIC0.78□□□□□ -2.28
NPAS2Q99743 AL390729.2-201ENST00000416137 156 ntBASIC0.78□□□□□ -2.28
NPAS2Q99743 PMCHL1-202ENST00000423102 261 ntBASIC0.78□□□□□ -2.28
NPAS2Q99743 Y_RNA.639-201ENST00000458981 102 ntBASIC0.78□□□□□ -2.28
NPAS2Q99743 RNU7-21P-201ENST00000459430 62 ntBASIC0.78□□□□□ -2.28
NPAS2Q99743 AC117454.1-201ENST00000491120 168 ntBASIC0.78□□□□□ -2.28
NPAS2Q99743 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.78□□□□□ -2.28
NPAS2Q99743 RNU6-197P-201ENST00000516680 100 ntBASIC0.78□□□□□ -2.28
NPAS2Q99743 AC090142.3-201ENST00000519012 385 ntBASIC0.78□□□□□ -2.28
NPAS2Q99743 DEFB108E-201ENST00000524692 240 ntBASIC0.78□□□□□ -2.28
NPAS2Q99743 MIR4653-201ENST00000585107 83 ntBASIC0.78□□□□□ -2.28
NPAS2Q99743 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.78□□□□□ -2.28
NPAS2Q99743 PRELID3BP2-201ENST00000605362 201 ntBASIC0.78□□□□□ -2.28
NPAS2Q99743 MIR1302-2-201ENST00000607096 138 ntBASIC0.78□□□□□ -2.28
NPAS2Q99743 AL096861.1-201ENST00000610899 123 ntBASIC0.78□□□□□ -2.28
NPAS2Q99743 AC090971.5-201ENST00000621102 293 ntBASIC0.78□□□□□ -2.28
NPAS2Q99743 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.78□□□□□ -2.29
NPAS2Q99743 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.77□□□□□ -2.29
NPAS2Q99743 Y_RNA.36-201ENST00000362602 112 ntBASIC0.77□□□□□ -2.29
NPAS2Q99743 RNU4-80P-201ENST00000363200 141 ntBASIC0.77□□□□□ -2.29
NPAS2Q99743 Y_RNA.148-201ENST00000363557 117 ntBASIC0.77□□□□□ -2.29
NPAS2Q99743 RNU6-1048P-201ENST00000364054 107 ntBASIC0.77□□□□□ -2.29
NPAS2Q99743 U8.7-201ENST00000364940 136 ntBASIC0.77□□□□□ -2.29
NPAS2Q99743 RNU6-867P-201ENST00000364956 107 ntBASIC0.77□□□□□ -2.29
NPAS2Q99743 Y_RNA.383-201ENST00000383855 97 ntBASIC0.77□□□□□ -2.29
NPAS2Q99743 Y_RNA.424-201ENST00000384063 103 ntBASIC0.77□□□□□ -2.29
NPAS2Q99743 RNU6-474P-201ENST00000384243 107 ntBASIC0.77□□□□□ -2.29
NPAS2Q99743 Y_RNA.526-201ENST00000384572 110 ntBASIC0.77□□□□□ -2.29
NPAS2Q99743 MIR942-201ENST00000401111 86 ntBASIC0.77□□□□□ -2.29
NPAS2Q99743 RNU6-710P-201ENST00000410424 105 ntBASIC0.77□□□□□ -2.29
NPAS2Q99743 SNRPGP10-201ENST00000432323 225 ntBASIC0.77□□□□□ -2.29
NPAS2Q99743 AC245047.8-201ENST00000456455 284 ntBASIC0.77□□□□□ -2.29
NPAS2Q99743 RNU7-90P-201ENST00000459216 62 ntBASIC0.77□□□□□ -2.29
NPAS2Q99743 RNU6-475P-201ENST00000516073 104 ntBASIC0.77□□□□□ -2.29
NPAS2Q99743 SNORD111.1-201ENST00000516421 86 ntBASIC0.77□□□□□ -2.29
NPAS2Q99743 SNORD45.4-201ENST00000516629 73 ntBASIC0.77□□□□□ -2.29
NPAS2Q99743 AC022616.4-201ENST00000522985 181 ntBASIC0.77□□□□□ -2.29
NPAS2Q99743 AC024405.2-202ENST00000532731 184 ntBASIC0.77□□□□□ -2.29
NPAS2Q99743 MIR4762-201ENST00000585261 75 ntBASIC0.77□□□□□ -2.29
NPAS2Q99743 POLR3GP1-201ENST00000594073 261 ntBASIC0.77□□□□□ -2.29
NPAS2Q99743 AC124312.5-201ENST00000604451 268 ntBASIC0.77□□□□□ -2.29
NPAS2Q99743 AL391903.3-201ENST00000612158 163 ntBASIC0.77□□□□□ -2.29
NPAS2Q99743 AC027279.3-201ENST00000625055 122 ntBASIC0.77□□□□□ -2.29
NPAS2Q99743 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.77□□□□□ -2.29
NPAS2Q99743 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
NPAS2Q99743 RNU6-1084P-201ENST00000362498 107 ntBASIC0.76□□□□□ -2.29
NPAS2Q99743 SNORD50B-201ENST00000364995 70 ntBASIC0.76□□□□□ -2.29
NPAS2Q99743 Y_RNA.336-201ENST00000365307 109 ntBASIC0.76□□□□□ -2.29
NPAS2Q99743 Y_RNA.368-201ENST00000365547 113 ntBASIC0.76□□□□□ -2.29
NPAS2Q99743 RNU6-1323P-201ENST00000384025 107 ntBASIC0.76□□□□□ -2.29
NPAS2Q99743 Y_RNA.431-201ENST00000384086 102 ntBASIC0.76□□□□□ -2.29
NPAS2Q99743 SNORD63-201ENST00000384262 68 ntBASIC0.76□□□□□ -2.29
NPAS2Q99743 RNU6-102P-201ENST00000384485 104 ntBASIC0.76□□□□□ -2.29
NPAS2Q99743 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
NPAS2Q99743 RNU2-14P-201ENST00000411053 191 ntBASIC0.76□□□□□ -2.29
NPAS2Q99743 RPS3AP1-201ENST00000413190 320 ntBASIC0.76□□□□□ -2.29
NPAS2Q99743 snoU13.25-201ENST00000458945 104 ntBASIC0.76□□□□□ -2.29
NPAS2Q99743 RNU6-1132P-201ENST00000459214 107 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 232.5 ms