Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 AL121655.1-201ENST00000605811 308 ntBASIC0.75□□□□□ -2.29
VMP1Q96GC9 AL136317.1-201ENST00000612653 226 ntBASIC0.75□□□□□ -2.29
VMP1Q96GC9 7SK.10-201ENST00000621414 298 ntBASIC0.75□□□□□ -2.29
VMP1Q96GC9 AL606534.2-204ENST00000635008 178 ntBASIC0.75□□□□□ -2.29
VMP1Q96GC9 Y_RNA.5-201ENST00000362334 102 ntBASIC0.74□□□□□ -2.29
VMP1Q96GC9 SNORD81.1-201ENST00000363064 77 ntBASIC0.74□□□□□ -2.29
VMP1Q96GC9 Y_RNA.116-201ENST00000363292 103 ntBASIC0.74□□□□□ -2.29
VMP1Q96GC9 Y_RNA.356-201ENST00000365475 113 ntBASIC0.74□□□□□ -2.29
VMP1Q96GC9 Y_RNA.368-201ENST00000365547 113 ntBASIC0.74□□□□□ -2.29
VMP1Q96GC9 Y_RNA.456-201ENST00000384232 111 ntBASIC0.74□□□□□ -2.29
VMP1Q96GC9 AL590004.1-201ENST00000405321 300 ntBASIC0.74□□□□□ -2.29
VMP1Q96GC9 SNORD99-201ENST00000408612 74 ntBASIC0.74□□□□□ -2.29
VMP1Q96GC9 AF228730.4-201ENST00000421457 183 ntBASIC0.74□□□□□ -2.29
VMP1Q96GC9 RNU6-976P-201ENST00000516086 111 ntBASIC0.74□□□□□ -2.29
VMP1Q96GC9 MIR151B-201ENST00000584249 96 ntBASIC0.74□□□□□ -2.29
VMP1Q96GC9 DEFB117-201ENST00000602356 141 ntBASIC0.74□□□□□ -2.29
VMP1Q96GC9 MIR6788-201ENST00000618842 66 ntBASIC0.74□□□□□ -2.29
VMP1Q96GC9 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.74□□□□□ -2.29
VMP1Q96GC9 MIR6866-201ENST00000638146 69 ntBASIC0.74□□□□□ -2.29
VMP1Q96GC9 SNORD14E-201ENST00000364009 85 ntBASIC0.73□□□□□ -2.29
VMP1Q96GC9 MIR518E-201ENST00000385252 88 ntBASIC0.73□□□□□ -2.29
VMP1Q96GC9 AC024067.1-201ENST00000426199 223 ntBASIC0.73□□□□□ -2.29
VMP1Q96GC9 MTND1P14-201ENST00000427400 950 ntBASIC0.73□□□□□ -2.29
VMP1Q96GC9 MTND5P20-201ENST00000448677 143 ntBASIC0.73□□□□□ -2.29
VMP1Q96GC9 RNU6-507P-201ENST00000516045 100 ntBASIC0.73□□□□□ -2.29
VMP1Q96GC9 RNU7-110P-201ENST00000516891 62 ntBASIC0.73□□□□□ -2.29
VMP1Q96GC9 AC036111.3-201ENST00000526389 112 ntBASIC0.73□□□□□ -2.29
VMP1Q96GC9 CYP3A137P-201ENST00000562436 69 ntBASIC0.73□□□□□ -2.29
VMP1Q96GC9 POLR3GP1-201ENST00000594073 261 ntBASIC0.73□□□□□ -2.29
VMP1Q96GC9 AL078603.1-201ENST00000603824 313 ntBASIC0.73□□□□□ -2.29
VMP1Q96GC9 AC011373.1-201ENST00000607270 237 ntBASIC0.73□□□□□ -2.29
VMP1Q96GC9 SNORD58B-201ENST00000607313 66 ntBASIC0.73□□□□□ -2.29
VMP1Q96GC9 AC007742.2-201ENST00000618226 398 ntBASIC0.73□□□□□ -2.29
VMP1Q96GC9 MIR548J-201ENST00000408833 112 ntBASIC0.72□□□□□ -2.29
VMP1Q96GC9 RNU6-994P-201ENST00000410507 111 ntBASIC0.72□□□□□ -2.29
VMP1Q96GC9 RNU6-733P-201ENST00000410759 104 ntBASIC0.72□□□□□ -2.29
VMP1Q96GC9 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.72□□□□□ -2.29
VMP1Q96GC9 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC0.72□□□□□ -2.29
VMP1Q96GC9 Y_RNA.702-201ENST00000516843 96 ntBASIC0.72□□□□□ -2.29
VMP1Q96GC9 AC024405.2-202ENST00000532731 184 ntBASIC0.72□□□□□ -2.29
VMP1Q96GC9 MIR548S-201ENST00000581352 82 ntBASIC0.72□□□□□ -2.29
VMP1Q96GC9 MIR4801-201ENST00000582704 82 ntBASIC0.72□□□□□ -2.29
VMP1Q96GC9 AP003357.1-201ENST00000604497 148 ntBASIC0.72□□□□□ -2.29
VMP1Q96GC9 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.72□□□□□ -2.29
VMP1Q96GC9 AC112487.2-201ENST00000637950 304 ntBASIC0.72□□□□□ -2.29
VMP1Q96GC9 AC134026.1-201ENST00000623249 2239 ntBASIC0.72□□□□□ -2.29
VMP1Q96GC9 Y_RNA.58-201ENST00000362807 102 ntBASIC0.71□□□□□ -2.3
VMP1Q96GC9 Y_RNA.154-201ENST00000363624 102 ntBASIC0.71□□□□□ -2.3
VMP1Q96GC9 Y_RNA.203-201ENST00000364106 102 ntBASIC0.71□□□□□ -2.3
VMP1Q96GC9 SNORD113.3-201ENST00000364630 78 ntBASIC0.71□□□□□ -2.3
VMP1Q96GC9 RNY3P1-201ENST00000365085 102 ntBASIC0.71□□□□□ -2.3
VMP1Q96GC9 RNY3-201ENST00000365484 102 ntBASIC0.71□□□□□ -2.3
VMP1Q96GC9 Y_RNA.439-201ENST00000384119 94 ntBASIC0.71□□□□□ -2.3
VMP1Q96GC9 SNORD63-201ENST00000384262 68 ntBASIC0.71□□□□□ -2.3
VMP1Q96GC9 RNU6-937P-201ENST00000384325 106 ntBASIC0.71□□□□□ -2.3
VMP1Q96GC9 Y_RNA.526-201ENST00000384572 110 ntBASIC0.71□□□□□ -2.3
VMP1Q96GC9 Y_RNA.551-201ENST00000384661 102 ntBASIC0.71□□□□□ -2.3
VMP1Q96GC9 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.71□□□□□ -2.3
VMP1Q96GC9 RNA5SP220-201ENST00000516298 104 ntBASIC0.71□□□□□ -2.3
VMP1Q96GC9 Y_RNA.713-201ENST00000517013 96 ntBASIC0.71□□□□□ -2.3
VMP1Q96GC9 AC127455.1-201ENST00000565496 145 ntBASIC0.71□□□□□ -2.3
VMP1Q96GC9 RNU6-94P-201ENST00000607728 107 ntBASIC0.71□□□□□ -2.3
VMP1Q96GC9 MIR4251-201ENST00000635819 61 ntBASIC0.71□□□□□ -2.3
VMP1Q96GC9 AL442644.1-201ENST00000454390 3105 ntBASIC0.71□□□□□ -2.3
VMP1Q96GC9 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.7□□□□□ -2.3
VMP1Q96GC9 Y_RNA.80-201ENST00000362996 102 ntBASIC0.7□□□□□ -2.3
VMP1Q96GC9 Y_RNA.148-201ENST00000363557 117 ntBASIC0.7□□□□□ -2.3
VMP1Q96GC9 Y_RNA.315-201ENST00000365117 102 ntBASIC0.7□□□□□ -2.3
VMP1Q96GC9 SNORD38C-201ENST00000384381 69 ntBASIC0.7□□□□□ -2.3
VMP1Q96GC9 Y_RNA.485-201ENST00000384395 102 ntBASIC0.7□□□□□ -2.3
VMP1Q96GC9 RNU6-21P-201ENST00000384710 107 ntBASIC0.7□□□□□ -2.3
VMP1Q96GC9 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.7□□□□□ -2.3
VMP1Q96GC9 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.7□□□□□ -2.3
VMP1Q96GC9 RNU4-30P-201ENST00000410245 143 ntBASIC0.7□□□□□ -2.3
VMP1Q96GC9 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC0.7□□□□□ -2.3
VMP1Q96GC9 U8.20-201ENST00000459445 131 ntBASIC0.7□□□□□ -2.3
VMP1Q96GC9 HMGN1P10-201ENST00000474557 553 ntBASIC0.7□□□□□ -2.3
VMP1Q96GC9 AC098869.1-201ENST00000481627 292 ntBASIC0.7□□□□□ -2.3
VMP1Q96GC9 AC117454.1-201ENST00000491120 168 ntBASIC0.7□□□□□ -2.3
VMP1Q96GC9 RNU7-115P-201ENST00000516433 55 ntBASIC0.7□□□□□ -2.3
VMP1Q96GC9 MIR3145-201ENST00000580727 82 ntBASIC0.7□□□□□ -2.3
VMP1Q96GC9 JPX_2.1-201ENST00000614161 69 ntBASIC0.7□□□□□ -2.3
VMP1Q96GC9 AC008133.2-201ENST00000624540 351 ntBASIC0.7□□□□□ -2.3
VMP1Q96GC9 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
VMP1Q96GC9 Y_RNA.143-201ENST00000363520 106 ntBASIC0.69□□□□□ -2.3
VMP1Q96GC9 U8.7-201ENST00000364940 136 ntBASIC0.69□□□□□ -2.3
VMP1Q96GC9 RNY1P14-201ENST00000384426 108 ntBASIC0.69□□□□□ -2.3
VMP1Q96GC9 RNU6-1067P-201ENST00000384752 107 ntBASIC0.69□□□□□ -2.3
VMP1Q96GC9 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.69□□□□□ -2.3
VMP1Q96GC9 AL392103.1-201ENST00000447000 198 ntBASIC0.69□□□□□ -2.3
VMP1Q96GC9 RPL23AP54-201ENST00000495129 419 ntBASIC0.69□□□□□ -2.3
VMP1Q96GC9 MTND3P22-201ENST00000510932 243 ntBASIC0.69□□□□□ -2.3
VMP1Q96GC9 RNU6-1223P-201ENST00000517124 104 ntBASIC0.69□□□□□ -2.3
VMP1Q96GC9 MIR548AR-201ENST00000582191 57 ntBASIC0.69□□□□□ -2.3
VMP1Q96GC9 AC087685.1-201ENST00000587507 141 ntBASIC0.69□□□□□ -2.3
VMP1Q96GC9 MIR548AY-201ENST00000617669 107 ntBASIC0.69□□□□□ -2.3
VMP1Q96GC9 MIR6835-201ENST00000621552 64 ntBASIC0.69□□□□□ -2.3
VMP1Q96GC9 RNU4-50P-201ENST00000364361 141 ntBASIC0.68□□□□□ -2.3
VMP1Q96GC9 Y_RNA.471-201ENST00000384312 102 ntBASIC0.68□□□□□ -2.3
VMP1Q96GC9 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 210.1 ms