Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC3.11□□□□□ -1.91
IFT43Q96FT9 AL445646.1-201ENST00000431784 216 ntBASIC3.11□□□□□ -1.91
IFT43Q96FT9 RNU6-970P-201ENST00000516312 107 ntBASIC3.11□□□□□ -1.91
IFT43Q96FT9 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC3.11□□□□□ -1.91
IFT43Q96FT9 AC021443.1-201ENST00000604478 211 ntBASIC3.11□□□□□ -1.91
IFT43Q96FT9 RNU1-133P-201ENST00000364867 167 ntBASIC3.1□□□□□ -1.91
IFT43Q96FT9 Y_RNA.298-201ENST00000364960 107 ntBASIC3.1□□□□□ -1.91
IFT43Q96FT9 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
IFT43Q96FT9 SNORA44-201ENST00000384584 132 ntBASIC3.1□□□□□ -1.91
IFT43Q96FT9 SNORA80E-201ENST00000384744 137 ntBASIC3.1□□□□□ -1.91
IFT43Q96FT9 U8.17-201ENST00000391292 132 ntBASIC3.1□□□□□ -1.91
IFT43Q96FT9 AL606517.2-201ENST00000442855 241 ntBASIC3.1□□□□□ -1.91
IFT43Q96FT9 AP004217.1-201ENST00000480579 346 ntBASIC3.1□□□□□ -1.91
IFT43Q96FT9 AC008885.1-201ENST00000514930 301 ntBASIC3.1□□□□□ -1.91
IFT43Q96FT9 MIR4778-201ENST00000577635 80 ntBASIC3.1□□□□□ -1.91
IFT43Q96FT9 MIR5009-201ENST00000578736 100 ntBASIC3.1□□□□□ -1.91
IFT43Q96FT9 MAPK10-266ENST00000641066 6555 ntBASIC3.1□□□□□ -1.91
IFT43Q96FT9 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.1□□□□□ -1.91
IFT43Q96FT9 MIR22-201ENST00000362190 85 ntBASIC3.09□□□□□ -1.91
IFT43Q96FT9 SNORA71.1-201ENST00000364523 117 ntBASIC3.09□□□□□ -1.91
IFT43Q96FT9 Y_RNA.440-201ENST00000384120 114 ntBASIC3.09□□□□□ -1.91
IFT43Q96FT9 SNORA51.10-201ENST00000384418 136 ntBASIC3.09□□□□□ -1.91
IFT43Q96FT9 Y_RNA.510-201ENST00000384511 114 ntBASIC3.09□□□□□ -1.91
IFT43Q96FT9 RNU6-440P-201ENST00000390882 105 ntBASIC3.09□□□□□ -1.91
IFT43Q96FT9 RNA5SP109-201ENST00000391010 116 ntBASIC3.09□□□□□ -1.91
IFT43Q96FT9 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.09□□□□□ -1.91
IFT43Q96FT9 AC087499.4-201ENST00000448505 178 ntBASIC3.09□□□□□ -1.91
IFT43Q96FT9 RNU7-80P-201ENST00000459562 61 ntBASIC3.09□□□□□ -1.91
IFT43Q96FT9 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC3.09□□□□□ -1.91
IFT43Q96FT9 AC068339.1-201ENST00000526965 141 ntBASIC3.09□□□□□ -1.91
IFT43Q96FT9 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC3.09□□□□□ -1.91
IFT43Q96FT9 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.09□□□□□ -1.92
IFT43Q96FT9 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.08□□□□□ -1.92
IFT43Q96FT9 SNORD115-3-201ENST00000363100 82 ntBASIC3.08□□□□□ -1.92
IFT43Q96FT9 SNORA80A-201ENST00000363922 136 ntBASIC3.08□□□□□ -1.92
IFT43Q96FT9 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.08□□□□□ -1.92
IFT43Q96FT9 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.08□□□□□ -1.92
IFT43Q96FT9 RN7SL20P-201ENST00000488827 297 ntBASIC3.08□□□□□ -1.92
IFT43Q96FT9 RN7SKP43-201ENST00000516173 320 ntBASIC3.08□□□□□ -1.92
IFT43Q96FT9 SNORD36C-201ENST00000516733 66 ntBASIC3.08□□□□□ -1.92
IFT43Q96FT9 SUMO2P16-201ENST00000519475 264 ntBASIC3.08□□□□□ -1.92
IFT43Q96FT9 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.08□□□□□ -1.92
IFT43Q96FT9 MIR4513-201ENST00000581077 86 ntBASIC3.08□□□□□ -1.92
IFT43Q96FT9 DLEU2_5.2-201ENST00000610606 84 ntBASIC3.08□□□□□ -1.92
IFT43Q96FT9 AC022513.1-201ENST00000624512 117 ntBASIC3.08□□□□□ -1.92
IFT43Q96FT9 AC009487.2-201ENST00000420969 6821 ntBASIC3.08□□□□□ -1.92
IFT43Q96FT9 RNU6-1131P-201ENST00000364955 107 ntBASIC3.07□□□□□ -1.92
IFT43Q96FT9 Y_RNA.454-201ENST00000384224 113 ntBASIC3.07□□□□□ -1.92
IFT43Q96FT9 Y_RNA.558-201ENST00000384685 113 ntBASIC3.07□□□□□ -1.92
IFT43Q96FT9 SNORA11.2-201ENST00000408318 127 ntBASIC3.07□□□□□ -1.92
IFT43Q96FT9 RNU6-938P-201ENST00000411285 103 ntBASIC3.07□□□□□ -1.92
IFT43Q96FT9 AC092427.1-202ENST00000430569 476 ntBASIC3.07□□□□□ -1.92
IFT43Q96FT9 AC104389.3-201ENST00000445629 235 ntBASIC3.07□□□□□ -1.92
IFT43Q96FT9 RNU7-164P-201ENST00000459221 62 ntBASIC3.07□□□□□ -1.92
IFT43Q96FT9 RNU6-830P-201ENST00000516353 107 ntBASIC3.07□□□□□ -1.92
IFT43Q96FT9 SNORA18.7-201ENST00000516910 131 ntBASIC3.07□□□□□ -1.92
IFT43Q96FT9 AP003484.1-201ENST00000530974 250 ntBASIC3.07□□□□□ -1.92
IFT43Q96FT9 AC005786.1-201ENST00000588553 154 ntBASIC3.07□□□□□ -1.92
IFT43Q96FT9 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.07□□□□□ -1.92
IFT43Q96FT9 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
IFT43Q96FT9 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
IFT43Q96FT9 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
IFT43Q96FT9 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
IFT43Q96FT9 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.06□□□□□ -1.92
IFT43Q96FT9 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
IFT43Q96FT9 Y_RNA.78-201ENST00000362970 110 ntBASIC3.06□□□□□ -1.92
IFT43Q96FT9 Y_RNA.351-201ENST00000365436 96 ntBASIC3.06□□□□□ -1.92
IFT43Q96FT9 Y_RNA.818-201ENST00000618813 71 ntBASIC3.06□□□□□ -1.92
IFT43Q96FT9 MIR8054-201ENST00000620877 86 ntBASIC3.06□□□□□ -1.92
IFT43Q96FT9 AC006386.2-201ENST00000624491 75 ntBASIC3.06□□□□□ -1.92
IFT43Q96FT9 AC012005.1-201ENST00000624575 75 ntBASIC3.06□□□□□ -1.92
IFT43Q96FT9 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
IFT43Q96FT9 ICE2P2-201ENST00000483823 2787 ntBASIC3.06□□□□□ -1.92
IFT43Q96FT9 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.05□□□□□ -1.92
IFT43Q96FT9 RNU1-58P-201ENST00000362413 163 ntBASIC3.05□□□□□ -1.92
IFT43Q96FT9 MIR29C-201ENST00000385231 88 ntBASIC3.05□□□□□ -1.92
IFT43Q96FT9 AL627390.1-201ENST00000396055 340 ntBASIC3.05□□□□□ -1.92
IFT43Q96FT9 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.05□□□□□ -1.92
IFT43Q96FT9 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC3.05□□□□□ -1.92
IFT43Q96FT9 RN7SL633P-201ENST00000488974 297 ntBASIC3.05□□□□□ -1.92
IFT43Q96FT9 AC084364.2-201ENST00000546924 395 ntBASIC3.05□□□□□ -1.92
IFT43Q96FT9 MIR3683-201ENST00000580847 82 ntBASIC3.05□□□□□ -1.92
IFT43Q96FT9 MIR4305-201ENST00000583252 102 ntBASIC3.05□□□□□ -1.92
IFT43Q96FT9 SNORA28-201ENST00000606769 126 ntBASIC3.05□□□□□ -1.92
IFT43Q96FT9 MIR7106-201ENST00000612419 65 ntBASIC3.05□□□□□ -1.92
IFT43Q96FT9 AC015726.2-201ENST00000620112 122 ntBASIC3.05□□□□□ -1.92
IFT43Q96FT9 MIR2052-201ENST00000636055 55 ntBASIC3.05□□□□□ -1.92
IFT43Q96FT9 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.05□□□□□ -1.92
IFT43Q96FT9 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.05□□□□□ -1.92
IFT43Q96FT9 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
IFT43Q96FT9 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.04□□□□□ -1.92
IFT43Q96FT9 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
IFT43Q96FT9 SNORA54-201ENST00000384281 123 ntBASIC3.04□□□□□ -1.92
IFT43Q96FT9 Y_RNA.500-201ENST00000384466 111 ntBASIC3.04□□□□□ -1.92
IFT43Q96FT9 MIR548D2-201ENST00000384955 97 ntBASIC3.04□□□□□ -1.92
IFT43Q96FT9 MIR590-201ENST00000385008 97 ntBASIC3.04□□□□□ -1.92
IFT43Q96FT9 MT-TI-201ENST00000387365 69 ntBASIC3.04□□□□□ -1.92
IFT43Q96FT9 AC022018.1-201ENST00000430685 241 ntBASIC3.04□□□□□ -1.92
IFT43Q96FT9 RPS29P6-201ENST00000438196 145 ntBASIC3.04□□□□□ -1.92
IFT43Q96FT9 STAG3L5P-204ENST00000443759 179 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 179.2 ms