Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 DEFB122-202ENST00000569013 197 ntBASIC1.88□□□□□ -2.11
PPP4R4Q6NUP7 RPL23AP91-201ENST00000569211 455 ntBASIC1.88□□□□□ -2.11
PPP4R4Q6NUP7 MIR3122-201ENST00000577243 73 ntBASIC1.88□□□□□ -2.11
PPP4R4Q6NUP7 MIR4524B-201ENST00000581569 115 ntBASIC1.88□□□□□ -2.11
PPP4R4Q6NUP7 AL365434.2-201ENST00000607979 234 ntBASIC1.88□□□□□ -2.11
PPP4R4Q6NUP7 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.88□□□□□ -2.11
PPP4R4Q6NUP7 AC027279.3-201ENST00000625055 122 ntBASIC1.88□□□□□ -2.11
PPP4R4Q6NUP7 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.88□□□□□ -2.11
PPP4R4Q6NUP7 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
PPP4R4Q6NUP7 AL442644.1-201ENST00000454390 3105 ntBASIC1.88□□□□□ -2.11
PPP4R4Q6NUP7 RNU6-833P-201ENST00000363486 107 ntBASIC1.87□□□□□ -2.11
PPP4R4Q6NUP7 RNU6-457P-201ENST00000363999 107 ntBASIC1.87□□□□□ -2.11
PPP4R4Q6NUP7 Y_RNA.293-201ENST00000364908 93 ntBASIC1.87□□□□□ -2.11
PPP4R4Q6NUP7 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.87□□□□□ -2.11
PPP4R4Q6NUP7 MIR526A2-201ENST00000390198 65 ntBASIC1.87□□□□□ -2.11
PPP4R4Q6NUP7 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.87□□□□□ -2.11
PPP4R4Q6NUP7 MLLT10P1-201ENST00000418346 262 ntBASIC1.87□□□□□ -2.11
PPP4R4Q6NUP7 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.87□□□□□ -2.11
PPP4R4Q6NUP7 RNU7-12P-201ENST00000516030 62 ntBASIC1.87□□□□□ -2.11
PPP4R4Q6NUP7 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.87□□□□□ -2.11
PPP4R4Q6NUP7 MIR3937-201ENST00000580135 106 ntBASIC1.87□□□□□ -2.11
PPP4R4Q6NUP7 SNORD27-201ENST00000363981 72 ntBASIC1.86□□□□□ -2.11
PPP4R4Q6NUP7 Y_RNA.304-201ENST00000365011 112 ntBASIC1.86□□□□□ -2.11
PPP4R4Q6NUP7 RNU6-1065P-201ENST00000384513 106 ntBASIC1.86□□□□□ -2.11
PPP4R4Q6NUP7 MIR526A1-201ENST00000384897 85 ntBASIC1.86□□□□□ -2.11
PPP4R4Q6NUP7 SNX2P2-201ENST00000424553 323 ntBASIC1.86□□□□□ -2.11
PPP4R4Q6NUP7 Y_RNA.638-201ENST00000459374 113 ntBASIC1.86□□□□□ -2.11
PPP4R4Q6NUP7 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.86□□□□□ -2.11
PPP4R4Q6NUP7 RNU6-1023P-201ENST00000516137 106 ntBASIC1.86□□□□□ -2.11
PPP4R4Q6NUP7 RNU6-917P-201ENST00000516294 104 ntBASIC1.86□□□□□ -2.11
PPP4R4Q6NUP7 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.86□□□□□ -2.11
PPP4R4Q6NUP7 AL121890.5-201ENST00000620848 304 ntBASIC1.86□□□□□ -2.11
PPP4R4Q6NUP7 AC106754.2-201ENST00000623006 233 ntBASIC1.86□□□□□ -2.11
PPP4R4Q6NUP7 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
PPP4R4Q6NUP7 RNU6-653P-201ENST00000363074 106 ntBASIC1.85□□□□□ -2.11
PPP4R4Q6NUP7 Y_RNA.269-201ENST00000364685 89 ntBASIC1.85□□□□□ -2.11
PPP4R4Q6NUP7 RNU6-163P-201ENST00000384396 106 ntBASIC1.85□□□□□ -2.11
PPP4R4Q6NUP7 MIR626-201ENST00000385032 94 ntBASIC1.85□□□□□ -2.11
PPP4R4Q6NUP7 RNU6-131P-201ENST00000391144 107 ntBASIC1.85□□□□□ -2.11
PPP4R4Q6NUP7 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.85□□□□□ -2.11
PPP4R4Q6NUP7 SNORD45.4-201ENST00000516629 73 ntBASIC1.85□□□□□ -2.11
PPP4R4Q6NUP7 AC024614.2-201ENST00000577584 372 ntBASIC1.85□□□□□ -2.11
PPP4R4Q6NUP7 MIR5089-201ENST00000580047 84 ntBASIC1.85□□□□□ -2.11
PPP4R4Q6NUP7 BX284668.6-201ENST00000606899 438 ntBASIC1.85□□□□□ -2.11
PPP4R4Q6NUP7 AL442067.1-201ENST00000613261 223 ntBASIC1.85□□□□□ -2.11
PPP4R4Q6NUP7 JPX_2.1-201ENST00000614161 69 ntBASIC1.85□□□□□ -2.11
PPP4R4Q6NUP7 Y_RNA.802-201ENST00000614892 130 ntBASIC1.85□□□□□ -2.11
PPP4R4Q6NUP7 AL365265.1-201ENST00000621045 234 ntBASIC1.85□□□□□ -2.11
PPP4R4Q6NUP7 MIR219B-201ENST00000637023 88 ntBASIC1.85□□□□□ -2.11
PPP4R4Q6NUP7 SNORD114-1-201ENST00000362705 72 ntBASIC1.84□□□□□ -2.11
PPP4R4Q6NUP7 MIR653-201ENST00000385279 96 ntBASIC1.84□□□□□ -2.11
PPP4R4Q6NUP7 MIR891A-201ENST00000401237 79 ntBASIC1.84□□□□□ -2.11
PPP4R4Q6NUP7 AC245047.8-201ENST00000456455 284 ntBASIC1.84□□□□□ -2.11
PPP4R4Q6NUP7 RNU6-250P-201ENST00000516958 103 ntBASIC1.84□□□□□ -2.11
PPP4R4Q6NUP7 MIR4724-201ENST00000579485 89 ntBASIC1.84□□□□□ -2.11
PPP4R4Q6NUP7 MIR2681-201ENST00000581814 105 ntBASIC1.84□□□□□ -2.11
PPP4R4Q6NUP7 AC008507.4-201ENST00000585464 127 ntBASIC1.84□□□□□ -2.11
PPP4R4Q6NUP7 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
PPP4R4Q6NUP7 MIR367-201ENST00000362299 68 ntBASIC1.83□□□□□ -2.12
PPP4R4Q6NUP7 RNU6-199P-201ENST00000362954 107 ntBASIC1.83□□□□□ -2.12
PPP4R4Q6NUP7 snoU2_19.4-201ENST00000364329 80 ntBASIC1.83□□□□□ -2.12
PPP4R4Q6NUP7 SNORD72-201ENST00000390994 80 ntBASIC1.83□□□□□ -2.12
PPP4R4Q6NUP7 SNRPGP14-201ENST00000435400 219 ntBASIC1.83□□□□□ -2.12
PPP4R4Q6NUP7 snoU13.23-201ENST00000458863 104 ntBASIC1.83□□□□□ -2.12
PPP4R4Q6NUP7 RNU6-111P-201ENST00000517179 105 ntBASIC1.83□□□□□ -2.12
PPP4R4Q6NUP7 Y_RNA.24-201ENST00000362508 103 ntBASIC1.82□□□□□ -2.12
PPP4R4Q6NUP7 Y_RNA.292-201ENST00000364904 97 ntBASIC1.82□□□□□ -2.12
PPP4R4Q6NUP7 RNY4P28-201ENST00000365281 93 ntBASIC1.82□□□□□ -2.12
PPP4R4Q6NUP7 Y_RNA.478-201ENST00000384358 107 ntBASIC1.82□□□□□ -2.12
PPP4R4Q6NUP7 SNORD41-201ENST00000386967 70 ntBASIC1.82□□□□□ -2.12
PPP4R4Q6NUP7 RN7SKP51-201ENST00000410781 304 ntBASIC1.82□□□□□ -2.12
PPP4R4Q6NUP7 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.82□□□□□ -2.12
PPP4R4Q6NUP7 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
PPP4R4Q6NUP7 Y_RNA.679-201ENST00000516416 91 ntBASIC1.82□□□□□ -2.12
PPP4R4Q6NUP7 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
PPP4R4Q6NUP7 AC092881.1-201ENST00000638218 2733 ntBASIC1.81□□□□□ -2.12
PPP4R4Q6NUP7 Y_RNA.229-201ENST00000364347 113 ntBASIC1.81□□□□□ -2.12
PPP4R4Q6NUP7 snoU2-30.1-201ENST00000365012 70 ntBASIC1.81□□□□□ -2.12
PPP4R4Q6NUP7 SNORA8.3-201ENST00000384679 139 ntBASIC1.81□□□□□ -2.12
PPP4R4Q6NUP7 MIR1298-201ENST00000408783 112 ntBASIC1.81□□□□□ -2.12
PPP4R4Q6NUP7 AL512310.8-201ENST00000550183 120 ntBASIC1.81□□□□□ -2.12
PPP4R4Q6NUP7 MIR5688-201ENST00000580619 83 ntBASIC1.81□□□□□ -2.12
PPP4R4Q6NUP7 MIR4769-201ENST00000584126 77 ntBASIC1.81□□□□□ -2.12
PPP4R4Q6NUP7 AC087685.1-201ENST00000587507 141 ntBASIC1.81□□□□□ -2.12
PPP4R4Q6NUP7 SNRPGP19-201ENST00000603826 189 ntBASIC1.81□□□□□ -2.12
PPP4R4Q6NUP7 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
PPP4R4Q6NUP7 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.81□□□□□ -2.12
PPP4R4Q6NUP7 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
PPP4R4Q6NUP7 RNY1-201ENST00000364228 113 ntBASIC1.8□□□□□ -2.12
PPP4R4Q6NUP7 RNA5SP496-201ENST00000391240 109 ntBASIC1.8□□□□□ -2.12
PPP4R4Q6NUP7 AC108210.2-201ENST00000503681 201 ntBASIC1.8□□□□□ -2.12
PPP4R4Q6NUP7 SCARNA8-201ENST00000515924 131 ntBASIC1.8□□□□□ -2.12
PPP4R4Q6NUP7 MIR3664-201ENST00000579074 99 ntBASIC1.8□□□□□ -2.12
PPP4R4Q6NUP7 AC006006.1-201ENST00000603082 144 ntBASIC1.8□□□□□ -2.12
PPP4R4Q6NUP7 AL513534.2-201ENST00000603836 250 ntBASIC1.8□□□□□ -2.12
PPP4R4Q6NUP7 RNU6-1084P-201ENST00000362498 107 ntBASIC1.79□□□□□ -2.12
PPP4R4Q6NUP7 Y_RNA.65-201ENST00000362846 100 ntBASIC1.79□□□□□ -2.12
PPP4R4Q6NUP7 MIR1289-2-201ENST00000408360 111 ntBASIC1.79□□□□□ -2.12
PPP4R4Q6NUP7 RPL30P7-201ENST00000479312 323 ntBASIC1.79□□□□□ -2.12
PPP4R4Q6NUP7 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 233.9 ms