Protein–RNA interactions for Protein: Q53RY4

KRTCAP3, Keratinocyte-associated protein 3, humanhuman

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3Q53RY4 RNA5SP482-201ENST00000391269 118 ntBASIC1.58□□□□□ -2.16
KRTCAP3Q53RY4 MTCO2P33-201ENST00000402100 465 ntBASIC1.58□□□□□ -2.16
KRTCAP3Q53RY4 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.58□□□□□ -2.16
KRTCAP3Q53RY4 BTF3P11-201ENST00000426582 477 ntBASIC1.58□□□□□ -2.16
KRTCAP3Q53RY4 Y_RNA.650-201ENST00000459002 102 ntBASIC1.58□□□□□ -2.16
KRTCAP3Q53RY4 Y_RNA.777-201ENST00000516982 102 ntBASIC1.58□□□□□ -2.16
KRTCAP3Q53RY4 MIR4282-201ENST00000583613 67 ntBASIC1.58□□□□□ -2.16
KRTCAP3Q53RY4 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.58□□□□□ -2.16
KRTCAP3Q53RY4 Y_RNA.771-201ENST00000598668 102 ntBASIC1.58□□□□□ -2.16
KRTCAP3Q53RY4 AC021506.2-201ENST00000612354 169 ntBASIC1.58□□□□□ -2.16
KRTCAP3Q53RY4 Y_RNA.789-201ENST00000622480 102 ntBASIC1.58□□□□□ -2.16
KRTCAP3Q53RY4 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.58□□□□□ -2.16
KRTCAP3Q53RY4 RNU6-899P-201ENST00000363947 107 ntBASIC1.57□□□□□ -2.16
KRTCAP3Q53RY4 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.57□□□□□ -2.16
KRTCAP3Q53RY4 RPS29P23-201ENST00000458635 123 ntBASIC1.57□□□□□ -2.16
KRTCAP3Q53RY4 SNORD2.1-201ENST00000458762 69 ntBASIC1.57□□□□□ -2.16
KRTCAP3Q53RY4 RPL23AP54-201ENST00000495129 419 ntBASIC1.57□□□□□ -2.16
KRTCAP3Q53RY4 RPS29P11-201ENST00000496507 171 ntBASIC1.57□□□□□ -2.16
KRTCAP3Q53RY4 AC079140.2-201ENST00000506193 142 ntBASIC1.57□□□□□ -2.16
KRTCAP3Q53RY4 RNU6-902P-201ENST00000517212 91 ntBASIC1.57□□□□□ -2.16
KRTCAP3Q53RY4 AC127455.1-201ENST00000565496 145 ntBASIC1.57□□□□□ -2.16
KRTCAP3Q53RY4 MIR8081-201ENST00000611533 95 ntBASIC1.57□□□□□ -2.16
KRTCAP3Q53RY4 AC013791.1-201ENST00000616619 62 ntBASIC1.57□□□□□ -2.16
KRTCAP3Q53RY4 Y_RNA.4-201ENST00000362333 112 ntBASIC1.56□□□□□ -2.16
KRTCAP3Q53RY4 Y_RNA.238-201ENST00000364441 102 ntBASIC1.56□□□□□ -2.16
KRTCAP3Q53RY4 Y_RNA.476-201ENST00000384347 108 ntBASIC1.56□□□□□ -2.16
KRTCAP3Q53RY4 Y_RNA.489-201ENST00000384410 101 ntBASIC1.56□□□□□ -2.16
KRTCAP3Q53RY4 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.56□□□□□ -2.16
KRTCAP3Q53RY4 SNORA17.3-201ENST00000391159 129 ntBASIC1.56□□□□□ -2.16
KRTCAP3Q53RY4 Y_RNA.590-201ENST00000410140 107 ntBASIC1.56□□□□□ -2.16
KRTCAP3Q53RY4 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.56□□□□□ -2.16
KRTCAP3Q53RY4 AC099513.1-201ENST00000490423 301 ntBASIC1.56□□□□□ -2.16
KRTCAP3Q53RY4 SNORD116-28-201ENST00000516123 91 ntBASIC1.56□□□□□ -2.16
KRTCAP3Q53RY4 Y_RNA.679-201ENST00000516416 91 ntBASIC1.56□□□□□ -2.16
KRTCAP3Q53RY4 RNU6-388P-201ENST00000517012 105 ntBASIC1.56□□□□□ -2.16
KRTCAP3Q53RY4 RNU6-389P-201ENST00000517048 105 ntBASIC1.56□□□□□ -2.16
KRTCAP3Q53RY4 MIR5692C2-201ENST00000577959 77 ntBASIC1.56□□□□□ -2.16
KRTCAP3Q53RY4 MIR3937-201ENST00000580135 106 ntBASIC1.56□□□□□ -2.16
KRTCAP3Q53RY4 AC005357.1-201ENST00000588399 301 ntBASIC1.56□□□□□ -2.16
KRTCAP3Q53RY4 AC011921.3-201ENST00000605540 361 ntBASIC1.56□□□□□ -2.16
KRTCAP3Q53RY4 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.56□□□□□ -2.16
KRTCAP3Q53RY4 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
KRTCAP3Q53RY4 RNU4-41P-201ENST00000364426 143 ntBASIC1.55□□□□□ -2.16
KRTCAP3Q53RY4 RNU6-203P-201ENST00000384038 104 ntBASIC1.55□□□□□ -2.16
KRTCAP3Q53RY4 SNORA12.1-201ENST00000390873 148 ntBASIC1.55□□□□□ -2.16
KRTCAP3Q53RY4 SNORA36B-201ENST00000410438 131 ntBASIC1.55□□□□□ -2.16
KRTCAP3Q53RY4 BTF3P4-201ENST00000418852 495 ntBASIC1.55□□□□□ -2.16
KRTCAP3Q53RY4 OR9P1P-201ENST00000496431 281 ntBASIC1.55□□□□□ -2.16
KRTCAP3Q53RY4 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.55□□□□□ -2.16
KRTCAP3Q53RY4 MIR3618-201ENST00000580330 88 ntBASIC1.55□□□□□ -2.16
KRTCAP3Q53RY4 AC073349.3-201ENST00000617616 186 ntBASIC1.55□□□□□ -2.16
KRTCAP3Q53RY4 AC078938.1-201ENST00000620993 318 ntBASIC1.55□□□□□ -2.16
KRTCAP3Q53RY4 MIR337-201ENST00000362281 93 ntBASIC1.54□□□□□ -2.16
KRTCAP3Q53RY4 RNU6-1123P-201ENST00000362347 106 ntBASIC1.54□□□□□ -2.16
KRTCAP3Q53RY4 Y_RNA.203-201ENST00000364106 102 ntBASIC1.54□□□□□ -2.16
KRTCAP3Q53RY4 Y_RNA.292-201ENST00000364904 97 ntBASIC1.54□□□□□ -2.16
KRTCAP3Q53RY4 SNORD1A-201ENST00000364968 72 ntBASIC1.54□□□□□ -2.16
KRTCAP3Q53RY4 RNY4P28-201ENST00000365281 93 ntBASIC1.54□□□□□ -2.16
KRTCAP3Q53RY4 RNU6-1065P-201ENST00000384513 106 ntBASIC1.54□□□□□ -2.16
KRTCAP3Q53RY4 MIR194-1-201ENST00000384892 85 ntBASIC1.54□□□□□ -2.16
KRTCAP3Q53RY4 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.54□□□□□ -2.16
KRTCAP3Q53RY4 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.54□□□□□ -2.16
KRTCAP3Q53RY4 RNU6-437P-201ENST00000459408 95 ntBASIC1.54□□□□□ -2.16
KRTCAP3Q53RY4 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.54□□□□□ -2.16
KRTCAP3Q53RY4 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.54□□□□□ -2.16
KRTCAP3Q53RY4 MIR4419B-201ENST00000577260 68 ntBASIC1.54□□□□□ -2.16
KRTCAP3Q53RY4 MIR3671-201ENST00000580455 88 ntBASIC1.54□□□□□ -2.16
KRTCAP3Q53RY4 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.54□□□□□ -2.16
KRTCAP3Q53RY4 AL591926.4-201ENST00000616895 298 ntBASIC1.54□□□□□ -2.16
KRTCAP3Q53RY4 AL513423.1-201ENST00000621695 132 ntBASIC1.54□□□□□ -2.16
KRTCAP3Q53RY4 AC095038.3-201ENST00000634439 195 ntBASIC1.54□□□□□ -2.16
KRTCAP3Q53RY4 SNORD68-201ENST00000363214 84 ntBASIC1.53□□□□□ -2.16
KRTCAP3Q53RY4 RNU6-1205P-201ENST00000363625 106 ntBASIC1.53□□□□□ -2.16
KRTCAP3Q53RY4 Y_RNA.164-201ENST00000363709 102 ntBASIC1.53□□□□□ -2.16
KRTCAP3Q53RY4 Y_RNA.253-201ENST00000364562 112 ntBASIC1.53□□□□□ -2.16
KRTCAP3Q53RY4 RNU6-144P-201ENST00000383951 107 ntBASIC1.53□□□□□ -2.16
KRTCAP3Q53RY4 AL161935.2-201ENST00000414627 60 ntBASIC1.53□□□□□ -2.16
KRTCAP3Q53RY4 AP1B1P2-201ENST00000416196 106 ntBASIC1.53□□□□□ -2.16
KRTCAP3Q53RY4 RPL30P13-201ENST00000418873 348 ntBASIC1.53□□□□□ -2.16
KRTCAP3Q53RY4 Z98949.2-201ENST00000440996 144 ntBASIC1.53□□□□□ -2.16
KRTCAP3Q53RY4 PGBD4P5-201ENST00000445958 426 ntBASIC1.53□□□□□ -2.16
KRTCAP3Q53RY4 HMGN1P7-201ENST00000491722 313 ntBASIC1.53□□□□□ -2.16
KRTCAP3Q53RY4 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.53□□□□□ -2.16
KRTCAP3Q53RY4 AL512598.1-201ENST00000610158 273 ntBASIC1.53□□□□□ -2.16
KRTCAP3Q53RY4 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.53□□□□□ -2.16
KRTCAP3Q53RY4 AL442067.1-201ENST00000613261 223 ntBASIC1.53□□□□□ -2.16
KRTCAP3Q53RY4 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
KRTCAP3Q53RY4 RNY1-201ENST00000364228 113 ntBASIC1.52□□□□□ -2.17
KRTCAP3Q53RY4 RNU4-10P-201ENST00000364383 140 ntBASIC1.52□□□□□ -2.17
KRTCAP3Q53RY4 RNU6-424P-201ENST00000384367 105 ntBASIC1.52□□□□□ -2.17
KRTCAP3Q53RY4 RNU4-62P-201ENST00000410125 130 ntBASIC1.52□□□□□ -2.17
KRTCAP3Q53RY4 RN7SKP51-201ENST00000410781 304 ntBASIC1.52□□□□□ -2.17
KRTCAP3Q53RY4 AC004965.1-201ENST00000413033 213 ntBASIC1.52□□□□□ -2.17
KRTCAP3Q53RY4 CALM2P4-201ENST00000430810 426 ntBASIC1.52□□□□□ -2.17
KRTCAP3Q53RY4 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.52□□□□□ -2.17
KRTCAP3Q53RY4 RNA5SP168-201ENST00000516642 112 ntBASIC1.52□□□□□ -2.17
KRTCAP3Q53RY4 SNORD53B-201ENST00000577887 78 ntBASIC1.52□□□□□ -2.17
KRTCAP3Q53RY4 AC141273.2-201ENST00000618989 130 ntBASIC1.52□□□□□ -2.17
KRTCAP3Q53RY4 AL365265.1-201ENST00000621045 234 ntBASIC1.52□□□□□ -2.17
KRTCAP3Q53RY4 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 172 ms