Protein–RNA interactions for Protein: P43489

TNFRSF4, Tumor necrosis factor receptor superfamily member 4, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4P43489 RNU6-570P-201ENST00000517051 105 ntBASIC1.17□□□□□ -2.22
TNFRSF4P43489 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.17□□□□□ -2.22
TNFRSF4P43489 AL358944.1-201ENST00000528537 144 ntBASIC1.17□□□□□ -2.22
TNFRSF4P43489 MIR4778-201ENST00000577635 80 ntBASIC1.17□□□□□ -2.22
TNFRSF4P43489 MIR6734-201ENST00000621166 68 ntBASIC1.17□□□□□ -2.22
TNFRSF4P43489 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.16□□□□□ -2.22
TNFRSF4P43489 SNORA25.1-201ENST00000362326 128 ntBASIC1.16□□□□□ -2.22
TNFRSF4P43489 RNA5SP327-201ENST00000362494 101 ntBASIC1.16□□□□□ -2.22
TNFRSF4P43489 RNU6-199P-201ENST00000362954 107 ntBASIC1.16□□□□□ -2.22
TNFRSF4P43489 snoU2_19.2-201ENST00000363024 80 ntBASIC1.16□□□□□ -2.22
TNFRSF4P43489 RNU6-238P-201ENST00000363313 106 ntBASIC1.16□□□□□ -2.22
TNFRSF4P43489 Y_RNA.222-201ENST00000364264 102 ntBASIC1.16□□□□□ -2.22
TNFRSF4P43489 RNU4-41P-201ENST00000364426 143 ntBASIC1.16□□□□□ -2.22
TNFRSF4P43489 Y_RNA.418-201ENST00000384029 102 ntBASIC1.16□□□□□ -2.22
TNFRSF4P43489 Y_RNA.541-201ENST00000384640 113 ntBASIC1.16□□□□□ -2.22
TNFRSF4P43489 DYNLT3P2-201ENST00000442517 295 ntBASIC1.16□□□□□ -2.22
TNFRSF4P43489 MTND5P22-201ENST00000458380 195 ntBASIC1.16□□□□□ -2.22
TNFRSF4P43489 AC117454.1-201ENST00000491120 168 ntBASIC1.16□□□□□ -2.22
TNFRSF4P43489 OR9P1P-201ENST00000496431 281 ntBASIC1.16□□□□□ -2.22
TNFRSF4P43489 POLR3GP1-201ENST00000594073 261 ntBASIC1.16□□□□□ -2.22
TNFRSF4P43489 AC008737.2-201ENST00000599446 118 ntBASIC1.16□□□□□ -2.22
TNFRSF4P43489 AL513534.2-201ENST00000603836 250 ntBASIC1.16□□□□□ -2.22
TNFRSF4P43489 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
TNFRSF4P43489 SNORA72-201ENST00000384339 132 ntBASIC1.15□□□□□ -2.23
TNFRSF4P43489 RNU6-424P-201ENST00000384367 105 ntBASIC1.15□□□□□ -2.23
TNFRSF4P43489 Y_RNA.512-201ENST00000384518 102 ntBASIC1.15□□□□□ -2.23
TNFRSF4P43489 RNU6-1105P-201ENST00000384774 107 ntBASIC1.15□□□□□ -2.23
TNFRSF4P43489 MIR222-201ENST00000384992 110 ntBASIC1.15□□□□□ -2.23
TNFRSF4P43489 U8.16-201ENST00000391279 133 ntBASIC1.15□□□□□ -2.23
TNFRSF4P43489 MLLT10P1-201ENST00000418346 262 ntBASIC1.15□□□□□ -2.23
TNFRSF4P43489 MTCO1P5-201ENST00000433573 344 ntBASIC1.15□□□□□ -2.23
TNFRSF4P43489 RPL23AP54-201ENST00000495129 419 ntBASIC1.15□□□□□ -2.23
TNFRSF4P43489 RNU7-12P-201ENST00000516030 62 ntBASIC1.15□□□□□ -2.23
TNFRSF4P43489 RNU6-191P-201ENST00000516295 94 ntBASIC1.15□□□□□ -2.23
TNFRSF4P43489 RNU6-922P-201ENST00000516753 99 ntBASIC1.15□□□□□ -2.23
TNFRSF4P43489 RNU7-116P-201ENST00000516940 62 ntBASIC1.15□□□□□ -2.23
TNFRSF4P43489 RNU2-31P-201ENST00000516954 155 ntBASIC1.15□□□□□ -2.23
TNFRSF4P43489 AL512605.2-201ENST00000592972 256 ntBASIC1.15□□□□□ -2.23
TNFRSF4P43489 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.15□□□□□ -2.23
TNFRSF4P43489 MIR7974-201ENST00000615835 79 ntBASIC1.15□□□□□ -2.23
TNFRSF4P43489 RMST_2.1-201ENST00000617263 136 ntBASIC1.15□□□□□ -2.23
TNFRSF4P43489 MIR548AY-201ENST00000617669 107 ntBASIC1.15□□□□□ -2.23
TNFRSF4P43489 AC134026.1-201ENST00000623249 2239 ntBASIC1.14□□□□□ -2.23
TNFRSF4P43489 Y_RNA.16-201ENST00000362421 102 ntBASIC1.14□□□□□ -2.23
TNFRSF4P43489 SNORD114-27-201ENST00000363766 70 ntBASIC1.14□□□□□ -2.23
TNFRSF4P43489 RNU6-1048P-201ENST00000364054 107 ntBASIC1.14□□□□□ -2.23
TNFRSF4P43489 RNU6-1323P-201ENST00000384025 107 ntBASIC1.14□□□□□ -2.23
TNFRSF4P43489 RNU6-163P-201ENST00000384396 106 ntBASIC1.14□□□□□ -2.23
TNFRSF4P43489 MTND4LP30-201ENST00000454092 297 ntBASIC1.14□□□□□ -2.23
TNFRSF4P43489 SCARNA24.2-201ENST00000516968 130 ntBASIC1.14□□□□□ -2.23
TNFRSF4P43489 AC024405.2-202ENST00000532731 184 ntBASIC1.14□□□□□ -2.23
TNFRSF4P43489 AL360085.1-201ENST00000604713 532 ntBASIC1.14□□□□□ -2.23
TNFRSF4P43489 AL591926.4-201ENST00000616895 298 ntBASIC1.14□□□□□ -2.23
TNFRSF4P43489 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.14□□□□□ -2.23
TNFRSF4P43489 Y_RNA.84-201ENST00000363011 104 ntBASIC1.13□□□□□ -2.23
TNFRSF4P43489 Y_RNA.136-201ENST00000363444 102 ntBASIC1.13□□□□□ -2.23
TNFRSF4P43489 Y_RNA.145-201ENST00000363527 102 ntBASIC1.13□□□□□ -2.23
TNFRSF4P43489 Y_RNA.253-201ENST00000364562 112 ntBASIC1.13□□□□□ -2.23
TNFRSF4P43489 SNORA63C-201ENST00000364578 129 ntBASIC1.13□□□□□ -2.23
TNFRSF4P43489 U8.7-201ENST00000364940 136 ntBASIC1.13□□□□□ -2.23
TNFRSF4P43489 SNORA72.4-201ENST00000384174 132 ntBASIC1.13□□□□□ -2.23
TNFRSF4P43489 Y_RNA.459-201ENST00000384251 102 ntBASIC1.13□□□□□ -2.23
TNFRSF4P43489 RNU6-1109P-201ENST00000391187 107 ntBASIC1.13□□□□□ -2.23
TNFRSF4P43489 MTCO2P33-201ENST00000402100 465 ntBASIC1.13□□□□□ -2.23
TNFRSF4P43489 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.13□□□□□ -2.23
TNFRSF4P43489 PIGPP3-201ENST00000425307 415 ntBASIC1.13□□□□□ -2.23
TNFRSF4P43489 AC104332.1-201ENST00000440471 797 ntBASIC1.13□□□□□ -2.23
TNFRSF4P43489 Z98949.2-201ENST00000440996 144 ntBASIC1.13□□□□□ -2.23
TNFRSF4P43489 AC093850.1-201ENST00000454121 251 ntBASIC1.13□□□□□ -2.23
TNFRSF4P43489 RNU6-322P-201ENST00000516010 103 ntBASIC1.13□□□□□ -2.23
TNFRSF4P43489 RNU7-115P-201ENST00000516433 55 ntBASIC1.13□□□□□ -2.23
TNFRSF4P43489 RNU6-1116P-201ENST00000517269 99 ntBASIC1.13□□□□□ -2.23
TNFRSF4P43489 AC136628.3-201ENST00000521868 290 ntBASIC1.13□□□□□ -2.23
TNFRSF4P43489 AC008269.2-201ENST00000561915 1105 ntBASIC1.13□□□□□ -2.23
TNFRSF4P43489 RNU6-326P-201ENST00000365480 107 ntBASIC1.12□□□□□ -2.23
TNFRSF4P43489 MIR520E-201ENST00000384867 87 ntBASIC1.12□□□□□ -2.23
TNFRSF4P43489 MIR150-201ENST00000385048 84 ntBASIC1.12□□□□□ -2.23
TNFRSF4P43489 MIR618-201ENST00000385287 98 ntBASIC1.12□□□□□ -2.23
TNFRSF4P43489 SNORA26.5-201ENST00000391215 123 ntBASIC1.12□□□□□ -2.23
TNFRSF4P43489 RNU2-14P-201ENST00000411053 191 ntBASIC1.12□□□□□ -2.23
TNFRSF4P43489 RNU7-141P-201ENST00000459304 62 ntBASIC1.12□□□□□ -2.23
TNFRSF4P43489 AC091959.1-201ENST00000495857 238 ntBASIC1.12□□□□□ -2.23
TNFRSF4P43489 RNU7-40P-201ENST00000516397 64 ntBASIC1.12□□□□□ -2.23
TNFRSF4P43489 RNU6-165P-201ENST00000517170 99 ntBASIC1.12□□□□□ -2.23
TNFRSF4P43489 AC090049.2-201ENST00000550377 109 ntBASIC1.12□□□□□ -2.23
TNFRSF4P43489 AC127455.1-201ENST00000565496 145 ntBASIC1.12□□□□□ -2.23
TNFRSF4P43489 MIR4719-201ENST00000585233 84 ntBASIC1.12□□□□□ -2.23
TNFRSF4P43489 FAM106DP-201ENST00000586416 501 ntBASIC1.12□□□□□ -2.23
TNFRSF4P43489 AC120024.3-201ENST00000603167 156 ntBASIC1.12□□□□□ -2.23
TNFRSF4P43489 AP003357.1-201ENST00000604497 148 ntBASIC1.12□□□□□ -2.23
TNFRSF4P43489 GHRLOS.1-201ENST00000610995 70 ntBASIC1.12□□□□□ -2.23
TNFRSF4P43489 AC007742.2-201ENST00000618226 398 ntBASIC1.12□□□□□ -2.23
TNFRSF4P43489 RNU6-1084P-201ENST00000362498 107 ntBASIC1.11□□□□□ -2.23
TNFRSF4P43489 RNU6-801P-201ENST00000364087 105 ntBASIC1.11□□□□□ -2.23
TNFRSF4P43489 RNU6-662P-201ENST00000384253 104 ntBASIC1.11□□□□□ -2.23
TNFRSF4P43489 RNU6-738P-201ENST00000384531 106 ntBASIC1.11□□□□□ -2.23
TNFRSF4P43489 RNU6-939P-201ENST00000384634 107 ntBASIC1.11□□□□□ -2.23
TNFRSF4P43489 MIR653-201ENST00000385279 96 ntBASIC1.11□□□□□ -2.23
TNFRSF4P43489 AL451046.2-201ENST00000403074 277 ntBASIC1.11□□□□□ -2.23
TNFRSF4P43489 AL591704.2-201ENST00000421658 181 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 167.6 ms