Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 RNU2-56P-201ENST00000516826 190 ntBASIC1.57□□□□□ -2.16
CSPG5O95196 AC136628.3-201ENST00000521868 290 ntBASIC1.57□□□□□ -2.16
CSPG5O95196 AC012433.1-201ENST00000588916 398 ntBASIC1.57□□□□□ -2.16
CSPG5O95196 AC005972.2-201ENST00000604690 348 ntBASIC1.57□□□□□ -2.16
CSPG5O95196 7SK.10-201ENST00000621414 298 ntBASIC1.57□□□□□ -2.16
CSPG5O95196 SNORA1B-201ENST00000362535 133 ntBASIC1.56□□□□□ -2.16
CSPG5O95196 Y_RNA.265-201ENST00000364677 108 ntBASIC1.56□□□□□ -2.16
CSPG5O95196 Y_RNA.518-201ENST00000384552 113 ntBASIC1.56□□□□□ -2.16
CSPG5O95196 MIR520G-201ENST00000385064 90 ntBASIC1.56□□□□□ -2.16
CSPG5O95196 RNU6-763P-201ENST00000390865 106 ntBASIC1.56□□□□□ -2.16
CSPG5O95196 SNX2P2-201ENST00000424553 323 ntBASIC1.56□□□□□ -2.16
CSPG5O95196 AC104332.1-201ENST00000440471 797 ntBASIC1.56□□□□□ -2.16
CSPG5O95196 MTND4LP30-201ENST00000454092 297 ntBASIC1.56□□□□□ -2.16
CSPG5O95196 SNORD127-201ENST00000458892 86 ntBASIC1.56□□□□□ -2.16
CSPG5O95196 AC117454.1-201ENST00000491120 168 ntBASIC1.56□□□□□ -2.16
CSPG5O95196 Y_RNA.668-201ENST00000516233 93 ntBASIC1.56□□□□□ -2.16
CSPG5O95196 RNU6-341P-201ENST00000516973 96 ntBASIC1.56□□□□□ -2.16
CSPG5O95196 SUMO2P16-201ENST00000519475 264 ntBASIC1.56□□□□□ -2.16
CSPG5O95196 MIR3149-201ENST00000584629 83 ntBASIC1.56□□□□□ -2.16
CSPG5O95196 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.56□□□□□ -2.16
CSPG5O95196 AC021506.2-201ENST00000612354 169 ntBASIC1.56□□□□□ -2.16
CSPG5O95196 U4.1-201ENST00000620349 87 ntBASIC1.56□□□□□ -2.16
CSPG5O95196 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
CSPG5O95196 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
CSPG5O95196 MIR335-201ENST00000362173 94 ntBASIC1.55□□□□□ -2.16
CSPG5O95196 MIR96-201ENST00000362288 78 ntBASIC1.55□□□□□ -2.16
CSPG5O95196 RNU6-1123P-201ENST00000362347 106 ntBASIC1.55□□□□□ -2.16
CSPG5O95196 Y_RNA.117-201ENST00000363294 101 ntBASIC1.55□□□□□ -2.16
CSPG5O95196 Y_RNA.193-201ENST00000363979 102 ntBASIC1.55□□□□□ -2.16
CSPG5O95196 U8.7-201ENST00000364940 136 ntBASIC1.55□□□□□ -2.16
CSPG5O95196 RNU6-1080P-201ENST00000383982 107 ntBASIC1.55□□□□□ -2.16
CSPG5O95196 SNORA72.4-201ENST00000384174 132 ntBASIC1.55□□□□□ -2.16
CSPG5O95196 Y_RNA.556-201ENST00000384677 113 ntBASIC1.55□□□□□ -2.16
CSPG5O95196 MTCO2P33-201ENST00000402100 465 ntBASIC1.55□□□□□ -2.16
CSPG5O95196 Y_RNA.621-201ENST00000411065 96 ntBASIC1.55□□□□□ -2.16
CSPG5O95196 U8.19-201ENST00000459095 133 ntBASIC1.55□□□□□ -2.16
CSPG5O95196 RNU7-141P-201ENST00000459304 62 ntBASIC1.55□□□□□ -2.16
CSPG5O95196 SNORA27.4-201ENST00000516650 95 ntBASIC1.55□□□□□ -2.16
CSPG5O95196 AC024405.2-202ENST00000532731 184 ntBASIC1.55□□□□□ -2.16
CSPG5O95196 SNORA28-201ENST00000606769 126 ntBASIC1.55□□□□□ -2.16
CSPG5O95196 U2.14-201ENST00000615943 113 ntBASIC1.55□□□□□ -2.16
CSPG5O95196 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
CSPG5O95196 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.55□□□□□ -2.16
CSPG5O95196 AL161722.3-201ENST00000605789 2983 ntBASIC1.54□□□□□ -2.16
CSPG5O95196 Y_RNA.44-201ENST00000362676 108 ntBASIC1.54□□□□□ -2.16
CSPG5O95196 RNU6-1272P-201ENST00000362776 107 ntBASIC1.54□□□□□ -2.16
CSPG5O95196 Y_RNA.217-201ENST00000364214 105 ntBASIC1.54□□□□□ -2.16
CSPG5O95196 RNU6-702P-201ENST00000364982 107 ntBASIC1.54□□□□□ -2.16
CSPG5O95196 Y_RNA.452-201ENST00000384202 108 ntBASIC1.54□□□□□ -2.16
CSPG5O95196 SNORA12.1-201ENST00000390873 148 ntBASIC1.54□□□□□ -2.16
CSPG5O95196 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.54□□□□□ -2.16
CSPG5O95196 BTF3P11-201ENST00000426582 477 ntBASIC1.54□□□□□ -2.16
CSPG5O95196 SNRPGP13-201ENST00000442212 177 ntBASIC1.54□□□□□ -2.16
CSPG5O95196 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.54□□□□□ -2.16
CSPG5O95196 RNU6-1132P-201ENST00000459214 107 ntBASIC1.54□□□□□ -2.16
CSPG5O95196 Y_RNA.641-201ENST00000459414 105 ntBASIC1.54□□□□□ -2.16
CSPG5O95196 Y_RNA.637-201ENST00000459424 114 ntBASIC1.54□□□□□ -2.16
CSPG5O95196 RNA5SP220-201ENST00000516298 104 ntBASIC1.54□□□□□ -2.16
CSPG5O95196 RNU7-115P-201ENST00000516433 55 ntBASIC1.54□□□□□ -2.16
CSPG5O95196 AC015688.6-201ENST00000577737 104 ntBASIC1.54□□□□□ -2.16
CSPG5O95196 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.54□□□□□ -2.16
CSPG5O95196 POLR3GP1-201ENST00000594073 261 ntBASIC1.54□□□□□ -2.16
CSPG5O95196 AL365434.2-201ENST00000607979 234 ntBASIC1.54□□□□□ -2.16
CSPG5O95196 MIR548AY-201ENST00000617669 107 ntBASIC1.54□□□□□ -2.16
CSPG5O95196 SNORD3E-202ENST00000627253 216 ntBASIC1.54□□□□□ -2.16
CSPG5O95196 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.54□□□□□ -2.16
CSPG5O95196 AC068700.1-201ENST00000565862 3754 ntBASIC1.54□□□□□ -2.16
CSPG5O95196 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
CSPG5O95196 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
CSPG5O95196 MIR302D-201ENST00000362275 68 ntBASIC1.53□□□□□ -2.16
CSPG5O95196 Y_RNA.14-201ENST00000362415 103 ntBASIC1.53□□□□□ -2.16
CSPG5O95196 Y_RNA.54-201ENST00000362766 105 ntBASIC1.53□□□□□ -2.16
CSPG5O95196 Y_RNA.275-201ENST00000364726 110 ntBASIC1.53□□□□□ -2.16
CSPG5O95196 RNU6-740P-201ENST00000364734 105 ntBASIC1.53□□□□□ -2.16
CSPG5O95196 RNU6-1323P-201ENST00000384025 107 ntBASIC1.53□□□□□ -2.16
CSPG5O95196 Y_RNA.477-201ENST00000384352 108 ntBASIC1.53□□□□□ -2.16
CSPG5O95196 AL603910.2-201ENST00000407268 136 ntBASIC1.53□□□□□ -2.16
CSPG5O95196 RNU6-651P-201ENST00000411040 105 ntBASIC1.53□□□□□ -2.16
CSPG5O95196 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.53□□□□□ -2.16
CSPG5O95196 RNU6-902P-201ENST00000517212 91 ntBASIC1.53□□□□□ -2.16
CSPG5O95196 AP002004.2-201ENST00000531656 154 ntBASIC1.53□□□□□ -2.16
CSPG5O95196 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
CSPG5O95196 AL162424.1-201ENST00000602325 221 ntBASIC1.53□□□□□ -2.16
CSPG5O95196 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.53□□□□□ -2.16
CSPG5O95196 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.52□□□□□ -2.17
CSPG5O95196 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
CSPG5O95196 UBE2WP1-201ENST00000362030 340 ntBASIC1.52□□□□□ -2.17
CSPG5O95196 SNORA72-201ENST00000384339 132 ntBASIC1.52□□□□□ -2.17
CSPG5O95196 RNU6-1289P-201ENST00000384431 106 ntBASIC1.52□□□□□ -2.17
CSPG5O95196 MIR562-201ENST00000384894 95 ntBASIC1.52□□□□□ -2.17
CSPG5O95196 PGBD4P5-201ENST00000445958 426 ntBASIC1.52□□□□□ -2.17
CSPG5O95196 RPL23AP54-201ENST00000495129 419 ntBASIC1.52□□□□□ -2.17
CSPG5O95196 AC127455.1-201ENST00000565496 145 ntBASIC1.52□□□□□ -2.17
CSPG5O95196 AP003357.1-201ENST00000604497 148 ntBASIC1.52□□□□□ -2.17
CSPG5O95196 AC062037.2-201ENST00000610137 73 ntBASIC1.52□□□□□ -2.17
CSPG5O95196 AL008718.3-201ENST00000610217 321 ntBASIC1.52□□□□□ -2.17
CSPG5O95196 snoU18.1-201ENST00000629629 71 ntBASIC1.52□□□□□ -2.17
CSPG5O95196 RNY1-201ENST00000364228 113 ntBASIC1.51□□□□□ -2.17
CSPG5O95196 Y_RNA.277-201ENST00000364754 102 ntBASIC1.51□□□□□ -2.17
CSPG5O95196 RNU6-955P-201ENST00000410497 104 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 250.3 ms