Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.78□□□□□ -2.53
HMGB3O15347 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC-0.78□□□□□ -2.53
HMGB3O15347 RNU6-1012P-201ENST00000516606 109 ntBASIC-0.78□□□□□ -2.53
HMGB3O15347 SNORA31.14-201ENST00000516728 116 ntBASIC-0.78□□□□□ -2.53
HMGB3O15347 AC134878.1-201ENST00000619901 243 ntBASIC-0.78□□□□□ -2.53
HMGB3O15347 Z97988.1-201ENST00000637697 135 ntBASIC-0.78□□□□□ -2.53
HMGB3O15347 RNU6-674P-201ENST00000363831 107 ntBASIC-0.79□□□□□ -2.54
HMGB3O15347 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.79□□□□□ -2.54
HMGB3O15347 RNY3P10-201ENST00000384764 102 ntBASIC-0.79□□□□□ -2.54
HMGB3O15347 MIR514A2-201ENST00000385131 88 ntBASIC-0.79□□□□□ -2.54
HMGB3O15347 MIR514A3-201ENST00000385132 88 ntBASIC-0.79□□□□□ -2.54
HMGB3O15347 SNORD75.1-201ENST00000408373 60 ntBASIC-0.79□□□□□ -2.54
HMGB3O15347 RNU6-284P-201ENST00000411105 106 ntBASIC-0.79□□□□□ -2.54
HMGB3O15347 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC-0.79□□□□□ -2.54
HMGB3O15347 RNU2-60P-201ENST00000517290 128 ntBASIC-0.79□□□□□ -2.54
HMGB3O15347 AC006380.1-201ENST00000603598 186 ntBASIC-0.79□□□□□ -2.54
HMGB3O15347 AC079248.2-201ENST00000623779 326 ntBASIC-0.79□□□□□ -2.54
HMGB3O15347 ZNF299P-201ENST00000406845 1804 ntBASIC-0.8□□□□□ -2.54
HMGB3O15347 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.8□□□□□ -2.54
HMGB3O15347 RNA5SP257-201ENST00000363023 116 ntBASIC-0.8□□□□□ -2.54
HMGB3O15347 Y_RNA.118-201ENST00000363300 101 ntBASIC-0.8□□□□□ -2.54
HMGB3O15347 RNU6-522P-201ENST00000364497 107 ntBASIC-0.8□□□□□ -2.54
HMGB3O15347 MIR215-201ENST00000384858 110 ntBASIC-0.8□□□□□ -2.54
HMGB3O15347 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC-0.8□□□□□ -2.54
HMGB3O15347 AC087499.4-201ENST00000448505 178 ntBASIC-0.8□□□□□ -2.54
HMGB3O15347 MTND3P16-201ENST00000452205 344 ntBASIC-0.8□□□□□ -2.54
HMGB3O15347 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC-0.8□□□□□ -2.54
HMGB3O15347 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-0.8□□□□□ -2.54
HMGB3O15347 AC006600.1-201ENST00000572529 153 ntBASIC-0.8□□□□□ -2.54
HMGB3O15347 AC124303.1-201ENST00000605703 360 ntBASIC-0.8□□□□□ -2.54
HMGB3O15347 AC019193.3-201ENST00000609144 554 ntBASIC-0.8□□□□□ -2.54
HMGB3O15347 AC006441.5-201ENST00000612680 209 ntBASIC-0.8□□□□□ -2.54
HMGB3O15347 AL391262.2-201ENST00000622466 494 ntBASIC-0.8□□□□□ -2.54
HMGB3O15347 RNU6-596P-201ENST00000365395 98 ntBASIC-0.81□□□□□ -2.54
HMGB3O15347 RNU2-61P-201ENST00000411069 191 ntBASIC-0.81□□□□□ -2.54
HMGB3O15347 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC-0.81□□□□□ -2.54
HMGB3O15347 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC-0.81□□□□□ -2.54
HMGB3O15347 SNORA40.9-201ENST00000515895 93 ntBASIC-0.81□□□□□ -2.54
HMGB3O15347 RNU6-232P-201ENST00000517144 64 ntBASIC-0.81□□□□□ -2.54
HMGB3O15347 AC007751.1-201ENST00000529260 376 ntBASIC-0.81□□□□□ -2.54
HMGB3O15347 POLR3GP1-201ENST00000594073 261 ntBASIC-0.81□□□□□ -2.54
HMGB3O15347 RN7SL660P-201ENST00000614852 299 ntBASIC-0.81□□□□□ -2.54
HMGB3O15347 AF246928.1-201ENST00000623768 87 ntBASIC-0.81□□□□□ -2.54
HMGB3O15347 SNORD115-24-201ENST00000363528 82 ntBASIC-0.82□□□□□ -2.54
HMGB3O15347 RNU4-84P-201ENST00000364200 139 ntBASIC-0.82□□□□□ -2.54
HMGB3O15347 SNORA69-201ENST00000383895 132 ntBASIC-0.82□□□□□ -2.54
HMGB3O15347 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.82□□□□□ -2.54
HMGB3O15347 AL031003.1-201ENST00000404229 172 ntBASIC-0.82□□□□□ -2.54
HMGB3O15347 RNU4-83P-201ENST00000410863 133 ntBASIC-0.82□□□□□ -2.54
HMGB3O15347 FCF1P9-201ENST00000412546 282 ntBASIC-0.82□□□□□ -2.54
HMGB3O15347 AL138752.1-201ENST00000452964 351 ntBASIC-0.82□□□□□ -2.54
HMGB3O15347 RNU6-261P-201ENST00000459506 102 ntBASIC-0.82□□□□□ -2.54
HMGB3O15347 AC083904.1-201ENST00000487828 231 ntBASIC-0.82□□□□□ -2.54
HMGB3O15347 RNU6-897P-201ENST00000517135 105 ntBASIC-0.82□□□□□ -2.54
HMGB3O15347 AC060788.1-201ENST00000521318 469 ntBASIC-0.82□□□□□ -2.54
HMGB3O15347 CR383656.4-201ENST00000546909 122 ntBASIC-0.82□□□□□ -2.54
HMGB3O15347 MIR3925-201ENST00000584674 77 ntBASIC-0.82□□□□□ -2.54
HMGB3O15347 AL442067.1-201ENST00000613261 223 ntBASIC-0.82□□□□□ -2.54
HMGB3O15347 MIR4788-201ENST00000639104 80 ntBASIC-0.82□□□□□ -2.54
HMGB3O15347 RNA5SP98-201ENST00000363158 137 ntBASIC-0.83□□□□□ -2.54
HMGB3O15347 SNORD49B-201ENST00000365172 72 ntBASIC-0.83□□□□□ -2.54
HMGB3O15347 CEP57L1P1-201ENST00000430943 1201 ntBASIC-0.83□□□□□ -2.54
HMGB3O15347 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-0.83□□□□□ -2.54
HMGB3O15347 RNU7-125P-201ENST00000458760 62 ntBASIC-0.83□□□□□ -2.54
HMGB3O15347 AC107297.1-201ENST00000459991 176 ntBASIC-0.83□□□□□ -2.54
HMGB3O15347 MIR5706-201ENST00000579841 80 ntBASIC-0.83□□□□□ -2.54
HMGB3O15347 MIR4493-201ENST00000584016 73 ntBASIC-0.83□□□□□ -2.54
HMGB3O15347 AC008507.4-201ENST00000585464 127 ntBASIC-0.83□□□□□ -2.54
HMGB3O15347 AC244669.1-204ENST00000621564 178 ntBASIC-0.83□□□□□ -2.54
HMGB3O15347 SNORD93-201ENST00000408813 74 ntBASIC-0.84□□□□□ -2.54
HMGB3O15347 RNU4-30P-201ENST00000410245 143 ntBASIC-0.84□□□□□ -2.54
HMGB3O15347 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC-0.84□□□□□ -2.54
HMGB3O15347 RNU7-73P-201ENST00000458743 63 ntBASIC-0.84□□□□□ -2.54
HMGB3O15347 RNA5SP480-201ENST00000516840 109 ntBASIC-0.84□□□□□ -2.54
HMGB3O15347 MIR4273-201ENST00000582824 84 ntBASIC-0.84□□□□□ -2.54
HMGB3O15347 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.85□□□□□ -2.55
HMGB3O15347 Y_RNA.494-201ENST00000384432 111 ntBASIC-0.85□□□□□ -2.55
HMGB3O15347 RNU6-192P-201ENST00000391253 100 ntBASIC-0.85□□□□□ -2.55
HMGB3O15347 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC-0.85□□□□□ -2.55
HMGB3O15347 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC-0.85□□□□□ -2.55
HMGB3O15347 RNU7-67P-201ENST00000459003 62 ntBASIC-0.85□□□□□ -2.55
HMGB3O15347 RNU6-759P-201ENST00000516740 103 ntBASIC-0.85□□□□□ -2.55
HMGB3O15347 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.85□□□□□ -2.55
HMGB3O15347 AC105029.1-201ENST00000520250 669 ntBASIC-0.85□□□□□ -2.55
HMGB3O15347 MIR4802-201ENST00000581881 80 ntBASIC-0.85□□□□□ -2.55
HMGB3O15347 AC004467.1-201ENST00000615678 330 ntBASIC-0.85□□□□□ -2.55
HMGB3O15347 MIR6514-201ENST00000622549 70 ntBASIC-0.85□□□□□ -2.55
HMGB3O15347 AL162726.3-218ENST00000636401 95 ntBASIC-0.85□□□□□ -2.55
HMGB3O15347 MIR148A-201ENST00000362215 68 ntBASIC-0.86□□□□□ -2.55
HMGB3O15347 RNU6-1048P-201ENST00000364054 107 ntBASIC-0.86□□□□□ -2.55
HMGB3O15347 Y_RNA.203-201ENST00000364106 102 ntBASIC-0.86□□□□□ -2.55
HMGB3O15347 RNU6-879P-201ENST00000364328 108 ntBASIC-0.86□□□□□ -2.55
HMGB3O15347 Y_RNA.358-201ENST00000365491 99 ntBASIC-0.86□□□□□ -2.55
HMGB3O15347 Y_RNA.364-201ENST00000365532 101 ntBASIC-0.86□□□□□ -2.55
HMGB3O15347 RNU6-1323P-201ENST00000384025 107 ntBASIC-0.86□□□□□ -2.55
HMGB3O15347 RNU6-913P-201ENST00000390913 95 ntBASIC-0.86□□□□□ -2.55
HMGB3O15347 MIR190B-201ENST00000401119 79 ntBASIC-0.86□□□□□ -2.55
HMGB3O15347 RNU6-602P-201ENST00000411155 105 ntBASIC-0.86□□□□□ -2.55
HMGB3O15347 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC-0.86□□□□□ -2.55
HMGB3O15347 UBE2V1P7-201ENST00000446395 340 ntBASIC-0.86□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 531.4 ms