Protein–RNA interactions for Protein: A6NCS4

NKX2-6, Homeobox protein Nkx-2.6, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-6A6NCS4 RNU6-1137P-201ENST00000517073 99 ntBASIC0.89□□□□□ -2.27
NKX2-6A6NCS4 RNU6-988P-201ENST00000519081 107 ntBASIC0.89□□□□□ -2.27
NKX2-6A6NCS4 AC024405.2-202ENST00000532731 184 ntBASIC0.89□□□□□ -2.27
NKX2-6A6NCS4 AC020661.2-201ENST00000560114 134 ntBASIC0.89□□□□□ -2.27
NKX2-6A6NCS4 MIR4300-201ENST00000581016 96 ntBASIC0.89□□□□□ -2.27
NKX2-6A6NCS4 POLR3GP1-201ENST00000594073 261 ntBASIC0.89□□□□□ -2.27
NKX2-6A6NCS4 AC120024.3-201ENST00000603167 156 ntBASIC0.89□□□□□ -2.27
NKX2-6A6NCS4 HSPE1P19-201ENST00000603327 295 ntBASIC0.89□□□□□ -2.27
NKX2-6A6NCS4 MIR376A1-201ENST00000616574 68 ntBASIC0.89□□□□□ -2.27
NKX2-6A6NCS4 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.89□□□□□ -2.27
NKX2-6A6NCS4 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.89□□□□□ -2.27
NKX2-6A6NCS4 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.88□□□□□ -2.27
NKX2-6A6NCS4 Y_RNA.418-201ENST00000384029 102 ntBASIC0.88□□□□□ -2.27
NKX2-6A6NCS4 SNORA70.7-201ENST00000384159 133 ntBASIC0.88□□□□□ -2.27
NKX2-6A6NCS4 Y_RNA.526-201ENST00000384572 110 ntBASIC0.88□□□□□ -2.27
NKX2-6A6NCS4 MIR215-201ENST00000384858 110 ntBASIC0.88□□□□□ -2.27
NKX2-6A6NCS4 MIR522-201ENST00000385071 87 ntBASIC0.88□□□□□ -2.27
NKX2-6A6NCS4 MIR548P-201ENST00000408336 84 ntBASIC0.88□□□□□ -2.27
NKX2-6A6NCS4 RNU6-101P-201ENST00000410323 104 ntBASIC0.88□□□□□ -2.27
NKX2-6A6NCS4 ELOCP20-201ENST00000422460 345 ntBASIC0.88□□□□□ -2.27
NKX2-6A6NCS4 SNRPGP10-201ENST00000432323 225 ntBASIC0.88□□□□□ -2.27
NKX2-6A6NCS4 POLR2KP2-201ENST00000438155 177 ntBASIC0.88□□□□□ -2.27
NKX2-6A6NCS4 HSPE1P25-201ENST00000455484 251 ntBASIC0.88□□□□□ -2.27
NKX2-6A6NCS4 HMGN1P10-201ENST00000474557 553 ntBASIC0.88□□□□□ -2.27
NKX2-6A6NCS4 AC048334.1-201ENST00000477975 159 ntBASIC0.88□□□□□ -2.27
NKX2-6A6NCS4 Y_RNA.711-201ENST00000516993 102 ntBASIC0.88□□□□□ -2.27
NKX2-6A6NCS4 AL358944.1-201ENST00000528537 144 ntBASIC0.88□□□□□ -2.27
NKX2-6A6NCS4 AC090049.2-201ENST00000550377 109 ntBASIC0.88□□□□□ -2.27
NKX2-6A6NCS4 MIR3973-201ENST00000579824 107 ntBASIC0.88□□□□□ -2.27
NKX2-6A6NCS4 AL513534.2-201ENST00000603836 250 ntBASIC0.88□□□□□ -2.27
NKX2-6A6NCS4 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.88□□□□□ -2.27
NKX2-6A6NCS4 MIR8065-201ENST00000620577 100 ntBASIC0.88□□□□□ -2.27
NKX2-6A6NCS4 AC134503.1-201ENST00000633048 54 ntBASIC0.88□□□□□ -2.27
NKX2-6A6NCS4 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
NKX2-6A6NCS4 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
NKX2-6A6NCS4 RNU6-1084P-201ENST00000362498 107 ntBASIC0.87□□□□□ -2.27
NKX2-6A6NCS4 RNA5SP325-201ENST00000363756 130 ntBASIC0.87□□□□□ -2.27
NKX2-6A6NCS4 RNU6-801P-201ENST00000364087 105 ntBASIC0.87□□□□□ -2.27
NKX2-6A6NCS4 RNU4-38P-201ENST00000364472 129 ntBASIC0.87□□□□□ -2.27
NKX2-6A6NCS4 SNORD50B-201ENST00000364995 70 ntBASIC0.87□□□□□ -2.27
NKX2-6A6NCS4 Y_RNA.368-201ENST00000365547 113 ntBASIC0.87□□□□□ -2.27
NKX2-6A6NCS4 SNORA72-201ENST00000384339 132 ntBASIC0.87□□□□□ -2.27
NKX2-6A6NCS4 MIR653-201ENST00000385279 96 ntBASIC0.87□□□□□ -2.27
NKX2-6A6NCS4 MIR891A-201ENST00000401237 79 ntBASIC0.87□□□□□ -2.27
NKX2-6A6NCS4 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.87□□□□□ -2.27
NKX2-6A6NCS4 MIR1298-201ENST00000408783 112 ntBASIC0.87□□□□□ -2.27
NKX2-6A6NCS4 RPL23AP54-201ENST00000495129 419 ntBASIC0.87□□□□□ -2.27
NKX2-6A6NCS4 SEPT14P8-201ENST00000508026 178 ntBASIC0.87□□□□□ -2.27
NKX2-6A6NCS4 RNU7-40P-201ENST00000516397 64 ntBASIC0.87□□□□□ -2.27
NKX2-6A6NCS4 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.87□□□□□ -2.27
NKX2-6A6NCS4 SNORD113-5-201ENST00000607261 78 ntBASIC0.87□□□□□ -2.27
NKX2-6A6NCS4 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.87□□□□□ -2.27
NKX2-6A6NCS4 RNU6-833P-201ENST00000363486 107 ntBASIC0.86□□□□□ -2.27
NKX2-6A6NCS4 Y_RNA.214-201ENST00000364201 112 ntBASIC0.86□□□□□ -2.27
NKX2-6A6NCS4 SNORA2.2-201ENST00000365473 135 ntBASIC0.86□□□□□ -2.27
NKX2-6A6NCS4 RNU6-1105P-201ENST00000384774 107 ntBASIC0.86□□□□□ -2.27
NKX2-6A6NCS4 SNORD115-46-201ENST00000390982 71 ntBASIC0.86□□□□□ -2.27
NKX2-6A6NCS4 SNORA26.5-201ENST00000391215 123 ntBASIC0.86□□□□□ -2.27
NKX2-6A6NCS4 AL451046.2-201ENST00000403074 277 ntBASIC0.86□□□□□ -2.27
NKX2-6A6NCS4 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.86□□□□□ -2.27
NKX2-6A6NCS4 MIR1252-201ENST00000408861 65 ntBASIC0.86□□□□□ -2.27
NKX2-6A6NCS4 RNU6-710P-201ENST00000410424 105 ntBASIC0.86□□□□□ -2.27
NKX2-6A6NCS4 RPL21P38-201ENST00000418090 167 ntBASIC0.86□□□□□ -2.27
NKX2-6A6NCS4 RNU7-141P-201ENST00000459304 62 ntBASIC0.86□□□□□ -2.27
NKX2-6A6NCS4 CYCTP-201ENST00000504253 315 ntBASIC0.86□□□□□ -2.27
NKX2-6A6NCS4 MRPS35P2-201ENST00000508242 191 ntBASIC0.86□□□□□ -2.27
NKX2-6A6NCS4 RNY3P15-201ENST00000516297 97 ntBASIC0.86□□□□□ -2.27
NKX2-6A6NCS4 SNORD45.4-201ENST00000516629 73 ntBASIC0.86□□□□□ -2.27
NKX2-6A6NCS4 Y_RNA.701-201ENST00000516812 110 ntBASIC0.86□□□□□ -2.27
NKX2-6A6NCS4 AC022616.4-201ENST00000522985 181 ntBASIC0.86□□□□□ -2.27
NKX2-6A6NCS4 MIR5000-201ENST00000577717 103 ntBASIC0.86□□□□□ -2.27
NKX2-6A6NCS4 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.86□□□□□ -2.27
NKX2-6A6NCS4 AC103810.9-201ENST00000606688 112 ntBASIC0.86□□□□□ -2.27
NKX2-6A6NCS4 GHRLOS.1-201ENST00000610995 70 ntBASIC0.86□□□□□ -2.27
NKX2-6A6NCS4 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.86□□□□□ -2.27
NKX2-6A6NCS4 Y_RNA.64-201ENST00000362845 102 ntBASIC0.85□□□□□ -2.27
NKX2-6A6NCS4 Y_RNA.183-201ENST00000363882 113 ntBASIC0.85□□□□□ -2.27
NKX2-6A6NCS4 Y_RNA.210-201ENST00000364161 110 ntBASIC0.85□□□□□ -2.27
NKX2-6A6NCS4 RNU6-1187P-201ENST00000364771 110 ntBASIC0.85□□□□□ -2.27
NKX2-6A6NCS4 RNU6-1323P-201ENST00000384025 107 ntBASIC0.85□□□□□ -2.27
NKX2-6A6NCS4 Y_RNA.456-201ENST00000384232 111 ntBASIC0.85□□□□□ -2.27
NKX2-6A6NCS4 MTCO2P33-201ENST00000402100 465 ntBASIC0.85□□□□□ -2.27
NKX2-6A6NCS4 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.85□□□□□ -2.27
NKX2-6A6NCS4 snoU13.25-201ENST00000458945 104 ntBASIC0.85□□□□□ -2.27
NKX2-6A6NCS4 RNU6-1132P-201ENST00000459214 107 ntBASIC0.85□□□□□ -2.27
NKX2-6A6NCS4 SNORA31.2-201ENST00000516019 134 ntBASIC0.85□□□□□ -2.27
NKX2-6A6NCS4 RNU6-496P-201ENST00000516145 99 ntBASIC0.85□□□□□ -2.27
NKX2-6A6NCS4 RNU6-191P-201ENST00000516295 94 ntBASIC0.85□□□□□ -2.27
NKX2-6A6NCS4 RNU7-115P-201ENST00000516433 55 ntBASIC0.85□□□□□ -2.27
NKX2-6A6NCS4 Y_RNA.713-201ENST00000517013 96 ntBASIC0.85□□□□□ -2.27
NKX2-6A6NCS4 AC131281.1-201ENST00000522984 164 ntBASIC0.85□□□□□ -2.27
NKX2-6A6NCS4 CYP3A137P-201ENST00000562436 69 ntBASIC0.85□□□□□ -2.27
NKX2-6A6NCS4 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.85□□□□□ -2.27
NKX2-6A6NCS4 MIR4698-201ENST00000577795 80 ntBASIC0.85□□□□□ -2.27
NKX2-6A6NCS4 MIR4680-201ENST00000580906 66 ntBASIC0.85□□□□□ -2.27
NKX2-6A6NCS4 AC068700.1-201ENST00000565862 3754 ntBASIC0.85□□□□□ -2.27
NKX2-6A6NCS4 Y_RNA.19-201ENST00000362462 99 ntBASIC0.84□□□□□ -2.27
NKX2-6A6NCS4 snoU2_19.2-201ENST00000363024 80 ntBASIC0.84□□□□□ -2.27
NKX2-6A6NCS4 Y_RNA.203-201ENST00000364106 102 ntBASIC0.84□□□□□ -2.27
NKX2-6A6NCS4 Y_RNA.363-201ENST00000365529 113 ntBASIC0.84□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 173.6 ms