Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.35□□□□□ -1.87
PCDHB9Q9Y5E1 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
PCDHB9Q9Y5E1 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
PCDHB9Q9Y5E1 AL596211.1-201ENST00000569873 2277 ntBASIC3.35□□□□□ -1.87
PCDHB9Q9Y5E1 MIR30E-201ENST00000362104 92 ntBASIC3.35□□□□□ -1.87
PCDHB9Q9Y5E1 RNA5SP109-201ENST00000391010 116 ntBASIC3.35□□□□□ -1.87
PCDHB9Q9Y5E1 SNORA19.1-201ENST00000410656 129 ntBASIC3.35□□□□□ -1.87
PCDHB9Q9Y5E1 MIR2276-201ENST00000516886 89 ntBASIC3.35□□□□□ -1.87
PCDHB9Q9Y5E1 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC3.35□□□□□ -1.87
PCDHB9Q9Y5E1 MIR7106-201ENST00000612419 65 ntBASIC3.35□□□□□ -1.87
PCDHB9Q9Y5E1 uc_338.25-201ENST00000613756 156 ntBASIC3.35□□□□□ -1.87
PCDHB9Q9Y5E1 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.35□□□□□ -1.87
PCDHB9Q9Y5E1 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.34□□□□□ -1.87
PCDHB9Q9Y5E1 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
PCDHB9Q9Y5E1 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
PCDHB9Q9Y5E1 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
PCDHB9Q9Y5E1 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
PCDHB9Q9Y5E1 SNORA5B-201ENST00000363786 132 ntBASIC3.34□□□□□ -1.87
PCDHB9Q9Y5E1 MIR488-201ENST00000365739 83 ntBASIC3.34□□□□□ -1.87
PCDHB9Q9Y5E1 SNORD38C-201ENST00000384381 69 ntBASIC3.34□□□□□ -1.87
PCDHB9Q9Y5E1 MIR184-201ENST00000384962 84 ntBASIC3.34□□□□□ -1.87
PCDHB9Q9Y5E1 SNORA11.4-201ENST00000408823 129 ntBASIC3.34□□□□□ -1.87
PCDHB9Q9Y5E1 RNU4-47P-201ENST00000410876 114 ntBASIC3.34□□□□□ -1.87
PCDHB9Q9Y5E1 AC114811.1-201ENST00000507207 168 ntBASIC3.34□□□□□ -1.87
PCDHB9Q9Y5E1 RNU6-904P-201ENST00000516206 101 ntBASIC3.34□□□□□ -1.87
PCDHB9Q9Y5E1 RNU2-35P-201ENST00000516446 142 ntBASIC3.34□□□□□ -1.87
PCDHB9Q9Y5E1 MIR4425-201ENST00000580572 84 ntBASIC3.34□□□□□ -1.87
PCDHB9Q9Y5E1 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.34□□□□□ -1.87
PCDHB9Q9Y5E1 AL449363.1-201ENST00000617815 186 ntBASIC3.34□□□□□ -1.87
PCDHB9Q9Y5E1 ICE2P2-201ENST00000483823 2787 ntBASIC3.34□□□□□ -1.88
PCDHB9Q9Y5E1 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
PCDHB9Q9Y5E1 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.34□□□□□ -1.88
PCDHB9Q9Y5E1 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PCDHB9Q9Y5E1 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.33□□□□□ -1.88
PCDHB9Q9Y5E1 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
PCDHB9Q9Y5E1 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
PCDHB9Q9Y5E1 RNY4P29-201ENST00000410801 97 ntBASIC3.33□□□□□ -1.88
PCDHB9Q9Y5E1 STAG3L5P-204ENST00000443759 179 ntBASIC3.33□□□□□ -1.88
PCDHB9Q9Y5E1 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.33□□□□□ -1.88
PCDHB9Q9Y5E1 AC078899.2-201ENST00000595282 212 ntBASIC3.33□□□□□ -1.88
PCDHB9Q9Y5E1 uc_338.1-201ENST00000612113 180 ntBASIC3.33□□□□□ -1.88
PCDHB9Q9Y5E1 MIR8054-201ENST00000620877 86 ntBASIC3.33□□□□□ -1.88
PCDHB9Q9Y5E1 AL162726.3-218ENST00000636401 95 ntBASIC3.33□□□□□ -1.88
PCDHB9Q9Y5E1 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.33□□□□□ -1.88
PCDHB9Q9Y5E1 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.33□□□□□ -1.88
PCDHB9Q9Y5E1 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.32□□□□□ -1.88
PCDHB9Q9Y5E1 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PCDHB9Q9Y5E1 RNU1-70P-201ENST00000362618 164 ntBASIC3.32□□□□□ -1.88
PCDHB9Q9Y5E1 SNORA80A-201ENST00000363922 136 ntBASIC3.32□□□□□ -1.88
PCDHB9Q9Y5E1 SNORA26.2-201ENST00000390922 122 ntBASIC3.32□□□□□ -1.88
PCDHB9Q9Y5E1 AL445687.1-201ENST00000439946 251 ntBASIC3.32□□□□□ -1.88
PCDHB9Q9Y5E1 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.32□□□□□ -1.88
PCDHB9Q9Y5E1 AC141557.1-201ENST00000540982 400 ntBASIC3.32□□□□□ -1.88
PCDHB9Q9Y5E1 HSPE1P19-201ENST00000603327 295 ntBASIC3.32□□□□□ -1.88
PCDHB9Q9Y5E1 SNORA28-201ENST00000606769 126 ntBASIC3.32□□□□□ -1.88
PCDHB9Q9Y5E1 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PCDHB9Q9Y5E1 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
PCDHB9Q9Y5E1 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PCDHB9Q9Y5E1 MIRLET7C-201ENST00000362160 84 ntBASIC3.31□□□□□ -1.88
PCDHB9Q9Y5E1 SNORA48.8-201ENST00000391324 134 ntBASIC3.31□□□□□ -1.88
PCDHB9Q9Y5E1 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC3.31□□□□□ -1.88
PCDHB9Q9Y5E1 MTATP8P2-201ENST00000435212 202 ntBASIC3.31□□□□□ -1.88
PCDHB9Q9Y5E1 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.31□□□□□ -1.88
PCDHB9Q9Y5E1 RNU6-762P-201ENST00000517107 102 ntBASIC3.31□□□□□ -1.88
PCDHB9Q9Y5E1 NDUFB9P3-201ENST00000521269 501 ntBASIC3.31□□□□□ -1.88
PCDHB9Q9Y5E1 AC026271.5-201ENST00000577873 130 ntBASIC3.31□□□□□ -1.88
PCDHB9Q9Y5E1 AC005786.1-201ENST00000588553 154 ntBASIC3.31□□□□□ -1.88
PCDHB9Q9Y5E1 AC027279.3-201ENST00000625055 122 ntBASIC3.31□□□□□ -1.88
PCDHB9Q9Y5E1 MIR2052-201ENST00000636055 55 ntBASIC3.31□□□□□ -1.88
PCDHB9Q9Y5E1 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PCDHB9Q9Y5E1 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
PCDHB9Q9Y5E1 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
PCDHB9Q9Y5E1 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PCDHB9Q9Y5E1 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.3□□□□□ -1.88
PCDHB9Q9Y5E1 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
PCDHB9Q9Y5E1 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PCDHB9Q9Y5E1 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PCDHB9Q9Y5E1 RNU6-163P-201ENST00000384396 106 ntBASIC3.3□□□□□ -1.88
PCDHB9Q9Y5E1 ATP6V0E1P1-201ENST00000412537 226 ntBASIC3.3□□□□□ -1.88
PCDHB9Q9Y5E1 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC3.3□□□□□ -1.88
PCDHB9Q9Y5E1 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC3.3□□□□□ -1.88
PCDHB9Q9Y5E1 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.3□□□□□ -1.88
PCDHB9Q9Y5E1 RNU6-1116P-201ENST00000517269 99 ntBASIC3.3□□□□□ -1.88
PCDHB9Q9Y5E1 AL137790.1-201ENST00000634283 177 ntBASIC3.3□□□□□ -1.88
PCDHB9Q9Y5E1 MIR7153-201ENST00000637758 57 ntBASIC3.3□□□□□ -1.88
PCDHB9Q9Y5E1 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
PCDHB9Q9Y5E1 AL442644.1-201ENST00000454390 3105 ntBASIC3.3□□□□□ -1.88
PCDHB9Q9Y5E1 AC008264.2-201ENST00000610193 3731 ntBASIC3.3□□□□□ -1.88
PCDHB9Q9Y5E1 RNU4-16P-201ENST00000364737 141 ntBASIC3.29□□□□□ -1.88
PCDHB9Q9Y5E1 SNORA27-201ENST00000384323 126 ntBASIC3.29□□□□□ -1.88
PCDHB9Q9Y5E1 MIR1912-201ENST00000410389 80 ntBASIC3.29□□□□□ -1.88
PCDHB9Q9Y5E1 AL035398.1-201ENST00000430869 322 ntBASIC3.29□□□□□ -1.88
PCDHB9Q9Y5E1 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC3.29□□□□□ -1.88
PCDHB9Q9Y5E1 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
PCDHB9Q9Y5E1 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.29□□□□□ -1.88
PCDHB9Q9Y5E1 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
PCDHB9Q9Y5E1 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
PCDHB9Q9Y5E1 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PCDHB9Q9Y5E1 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PCDHB9Q9Y5E1 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 294.8 ms